RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 KRT75O95678 551 aa16.5■□□□□ 0.23
SMN2-215ENST00000628696 NCF2P19878 526 aaPredicted RBP16.5■□□□□ 0.23
SMN2-215ENST00000628696 ACAA2P42765 397 aaKnown RBP16.5■□□□□ 0.23
SMN2-215ENST00000628696 NAAAQ02083 359 aa16.5■□□□□ 0.23
SMN2-215ENST00000628696 C1orf140Q5VVS0 124 aa16.5■□□□□ 0.23
SMN2-215ENST00000628696 PRAMEF8Q5VWM4 474 aa16.5■□□□□ 0.23
SMN2-215ENST00000628696 PRAMEF7Q5VXH5 474 aa16.5■□□□□ 0.23
SMN2-215ENST00000628696 ANKRD16Q6P6B7 361 aa16.5■□□□□ 0.23
SMN2-215ENST00000628696 LRRC34Q8IZ02 419 aa16.5■□□□□ 0.23
SMN2-215ENST00000628696 KIRREL3Q8IZU9 778 aa16.5■□□□□ 0.23
SMN2-215ENST00000628696 AENQ8WTP8 325 aaKnown RBP16.5■□□□□ 0.23
SMN2-215ENST00000628696 BCL2L2Q92843 193 aaPredicted RBP16.5■□□□□ 0.23
SMN2-215ENST00000628696 MYOZ1Q9NP98 299 aaPredicted RBP16.5■□□□□ 0.23
SMN2-215ENST00000628696 AIG1Q9NVV5 245 aa16.5■□□□□ 0.23
SMN2-215ENST00000628696 UPK3AO75631 287 aa16.49■□□□□ 0.23
SMN2-215ENST00000628696 VAMP5O95183 116 aa16.49■□□□□ 0.23
SMN2-215ENST00000628696 CECR9P0C854 216 aa16.49■□□□□ 0.23
SMN2-215ENST00000628696 P2RY4P51582 365 aa16.49■□□□□ 0.23
SMN2-215ENST00000628696 MAPK11Q15759 364 aa16.49■□□□□ 0.23
SMN2-215ENST00000628696 ADIPOQQ15848 244 aa16.49■□□□□ 0.23
SMN2-215ENST00000628696 LIN52Q52LA3 116 aa16.49■□□□□ 0.23
SMN2-215ENST00000628696 OGFOD2Q6N063 350 aa16.49■□□□□ 0.23
SMN2-215ENST00000628696 LINGO2Q7L985 606 aa16.49■□□□□ 0.23
SMN2-215ENST00000628696 EPHX4Q8IUS5 362 aa16.49■□□□□ 0.23
SMN2-215ENST00000628696 KDM8Q8N371 416 aa16.49■□□□□ 0.23
SMN2-215ENST00000628696 CLIP4Q8N3C7 705 aa16.49■□□□□ 0.23
SMN2-215ENST00000628696 ZNF540Q8NDQ6 660 aa16.49■□□□□ 0.23
SMN2-215ENST00000628696 SLC25A36Q96CQ1 311 aa16.49■□□□□ 0.23
SMN2-215ENST00000628696 BOD1Q96IK1 185 aa16.49■□□□□ 0.23
SMN2-215ENST00000628696 PAIP2Q9BPZ3 127 aaKnown RBP16.49■□□□□ 0.23
SMN2-215ENST00000628696 TMEM109Q9BVC6 243 aa16.49■□□□□ 0.23
SMN2-215ENST00000628696 BPESC1Q9GZL8 116 aa16.49■□□□□ 0.23
SMN2-215ENST00000628696 RAB1BQ9H0U4 201 aa16.49■□□□□ 0.23
SMN2-215ENST00000628696 KCNK9Q9NPC2 374 aa16.49■□□□□ 0.23
SMN2-215ENST00000628696 P2RX2Q9UBL9 471 aa16.49■□□□□ 0.23
SMN2-215ENST00000628696 NBEAL1Q6ZS30 2694 aa16.48■□□□□ 0.23
SMN2-215ENST00000628696 OR6C65A6NJZ3 312 aa16.48■□□□□ 0.23
SMN2-215ENST00000628696 SDHDO14521 159 aa16.48■□□□□ 0.23
SMN2-215ENST00000628696 RFXANKO14593 260 aa16.48■□□□□ 0.23
SMN2-215ENST00000628696 TM9SF1O15321 606 aa16.48■□□□□ 0.23
SMN2-215ENST00000628696 FRS3O43559 492 aa16.48■□□□□ 0.23
SMN2-215ENST00000628696 BCHEP06276 602 aa16.48■□□□□ 0.23
SMN2-215ENST00000628696 C8BP07358 591 aa16.48■□□□□ 0.23
SMN2-215ENST00000628696 TFPTP0C1Z6 253 aa16.48■□□□□ 0.23
SMN2-215ENST00000628696 PRG2P13727 222 aa16.48■□□□□ 0.23
SMN2-215ENST00000628696 ETFAP13804 333 aa16.48■□□□□ 0.23
SMN2-215ENST00000628696 ZNF23P17027 643 aa16.48■□□□□ 0.23
SMN2-215ENST00000628696 PAX7P23759 505 aa16.48■□□□□ 0.23
SMN2-215ENST00000628696 CRATP43155 626 aa16.48■□□□□ 0.23
SMN2-215ENST00000628696 LRRC74AQ0VAA2 488 aa16.48■□□□□ 0.23
SMN2-215ENST00000628696 LARS2Q15031 903 aaKnown RBP16.48■□□□□ 0.23
SMN2-215ENST00000628696 ATG16L1Q676U5 607 aa16.48■□□□□ 0.23
SMN2-215ENST00000628696 ZBTB9Q96C00 473 aa16.48■□□□□ 0.23
SMN2-215ENST00000628696 TRIM44Q96DX7 344 aaPredicted RBP16.48■□□□□ 0.23
SMN2-215ENST00000628696 CENPHQ9H3R5 247 aa16.48■□□□□ 0.23
SMN2-215ENST00000628696 SEC61A2Q9H9S3 476 aa16.48■□□□□ 0.23
SMN2-215ENST00000628696 CACYBPQ9HB71 228 aaKnown RBP16.48■□□□□ 0.23
SMN2-215ENST00000628696 CALML5Q9NZT1 146 aa16.48■□□□□ 0.23
SMN2-215ENST00000628696 HAO1Q9UJM8 370 aa16.48■□□□□ 0.23
SMN2-215ENST00000628696 ZNF232Q9UNY5 417 aa16.48■□□□□ 0.23
SMN2-215ENST00000628696 RASD1Q9Y272 281 aa16.48■□□□□ 0.23
SMN2-215ENST00000628696 ZNF443Q9Y2A4 671 aaPredicted RBP16.48■□□□□ 0.23
SMN2-215ENST00000628696 SVEP1Q4LDE5 3571 aa16.48■□□□□ 0.23
SMN2-215ENST00000628696 ARPC4-TTLL3A0A0A6YYG9 625 aa16.47■□□□□ 0.23
SMN2-215ENST00000628696 LRP5LA4QPB2 252 aa16.47■□□□□ 0.23
SMN2-215ENST00000628696 VSTM5A8MXK1 200 aa16.47■□□□□ 0.23
SMN2-215ENST00000628696 PDE5AO76074 875 aa16.47■□□□□ 0.23
SMN2-215ENST00000628696 AHSA1O95433 338 aa16.47■□□□□ 0.23
SMN2-215ENST00000628696 CALCRP30988 508 aa16.47■□□□□ 0.23
SMN2-215ENST00000628696 IDH3GP51553 393 aaPredicted RBP16.47■□□□□ 0.23
SMN2-215ENST00000628696 CRISP3P54108 245 aa16.47■□□□□ 0.23
SMN2-215ENST00000628696 CLDN17P56750 224 aa16.47■□□□□ 0.23
SMN2-215ENST00000628696 ROR2Q01974 943 aaKnown RBP16.47■□□□□ 0.23
SMN2-215ENST00000628696 SQLEQ14534 574 aa16.47■□□□□ 0.23
SMN2-215ENST00000628696 EFNB3Q15768 340 aa16.47■□□□□ 0.23
SMN2-215ENST00000628696 CR1LQ2VPA4 569 aa16.47■□□□□ 0.23
SMN2-215ENST00000628696 RPS26P11Q5JNZ5 115 aaPredicted RBP16.47■□□□□ 0.23
SMN2-215ENST00000628696 OR4F15Q8NGB8 312 aa16.47■□□□□ 0.23
SMN2-215ENST00000628696 SOX7Q9BT81 388 aa16.47■□□□□ 0.23
SMN2-215ENST00000628696 PLK3Q9H4B4 646 aa16.47■□□□□ 0.23
SMN2-215ENST00000628696 WDR55Q9H6Y2 383 aaPredicted RBP16.47■□□□□ 0.23
SMN2-215ENST00000628696 SLC6A13Q9NSD5 602 aa16.47■□□□□ 0.23
SMN2-215ENST00000628696 CRNNQ9UBG3 495 aaPredicted RBP16.47■□□□□ 0.23
SMN2-215ENST00000628696 GPR45Q9Y5Y3 372 aa16.47■□□□□ 0.23
SMN2-215ENST00000628696 SH3PXD2BA1X283 911 aa16.46■□□□□ 0.23
SMN2-215ENST00000628696 hCG_2039718K7EN88 272 aa16.46■□□□□ 0.23
SMN2-215ENST00000628696 ANP32DO95626 131 aa16.46■□□□□ 0.23
SMN2-215ENST00000628696 STAMBPO95630 424 aa16.46■□□□□ 0.23
SMN2-215ENST00000628696 CELA3BP08861 270 aa16.46■□□□□ 0.23
SMN2-215ENST00000628696 GTF2E2P29084 291 aaKnown RBP16.46■□□□□ 0.23
SMN2-215ENST00000628696 EPHA3P29320 983 aa16.46■□□□□ 0.23
SMN2-215ENST00000628696 THBS4P35443 961 aa16.46■□□□□ 0.23
SMN2-215ENST00000628696 PPOXP50336 477 aa16.46■□□□□ 0.23
SMN2-215ENST00000628696 DSTNP60981 165 aa16.46■□□□□ 0.23
SMN2-215ENST00000628696 ARF1P84077 181 aaKnown RBP16.46■□□□□ 0.23
SMN2-215ENST00000628696 BST1Q10588 318 aa16.46■□□□□ 0.23
SMN2-215ENST00000628696 MPP2Q14168 576 aa16.46■□□□□ 0.23
SMN2-215ENST00000628696 LIPNQ5VXI9 398 aa16.46■□□□□ 0.23
SMN2-215ENST00000628696 NXNQ6DKJ4 435 aa16.46■□□□□ 0.23
SMN2-215ENST00000628696 SERPINA11Q86U17 422 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms