RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 POMGNT2Q8NAT1 580 aa12.43□□□□□ -0.42
SNRPA1-216ENST00000626000 OR9K2Q8NGE7 335 aa12.43□□□□□ -0.42
SNRPA1-216ENST00000626000 KISS1RQ969F8 398 aaPredicted RBP12.43□□□□□ -0.42
SNRPA1-216ENST00000626000 PRRC1Q96M27 445 aa12.43□□□□□ -0.42
SNRPA1-216ENST00000626000 ZNF300Q96RE9 604 aaPredicted RBP12.43□□□□□ -0.42
SNRPA1-216ENST00000626000 PTDSS2Q9BVG9 487 aa12.43□□□□□ -0.42
SNRPA1-216ENST00000626000 RSPO3Q9BXY4 272 aaPredicted RBP12.43□□□□□ -0.42
SNRPA1-216ENST00000626000 MUC13Q9H3R2 512 aa12.43□□□□□ -0.42
SNRPA1-216ENST00000626000 GORASP2Q9H8Y8 452 aa12.43□□□□□ -0.42
SNRPA1-216ENST00000626000 ARL8BQ9NVJ2 186 aa12.43□□□□□ -0.42
SNRPA1-216ENST00000626000 MRPL39Q9NYK5 338 aaKnown RBP12.43□□□□□ -0.42
SNRPA1-216ENST00000626000 MALT1Q9UDY8 824 aa12.43□□□□□ -0.42
SNRPA1-216ENST00000626000 ING1Q9UK53 422 aaPredicted RBP12.43□□□□□ -0.42
SNRPA1-216ENST00000626000 RCE1Q9Y256 329 aa12.43□□□□□ -0.42
SNRPA1-216ENST00000626000 FLVCR1Q9Y5Y0 555 aa12.43□□□□□ -0.42
SNRPA1-216ENST00000626000 A6NNC1 897 aa12.42□□□□□ -0.42
SNRPA1-216ENST00000626000 TPST2O60704 377 aa12.42□□□□□ -0.42
SNRPA1-216ENST00000626000 ZNF682O95780 498 aa12.42□□□□□ -0.42
SNRPA1-216ENST00000626000 NQO1P15559 274 aaKnown RBP12.42□□□□□ -0.42
SNRPA1-216ENST00000626000 ZNF43P17038 809 aa12.42□□□□□ -0.42
SNRPA1-216ENST00000626000 ITGA2P17301 1181 aa12.42□□□□□ -0.42
SNRPA1-216ENST00000626000 FAM27E3Q08E93 113 aa12.42□□□□□ -0.42
SNRPA1-216ENST00000626000 FBXW10Q5XX13 1052 aa12.42□□□□□ -0.42
SNRPA1-216ENST00000626000 GLYATQ6IB77 296 aa12.42□□□□□ -0.42
SNRPA1-216ENST00000626000 CASP12Q6UXS9 341 aa12.42□□□□□ -0.42
SNRPA1-216ENST00000626000 STAC2Q6ZMT1 411 aa12.42□□□□□ -0.42
SNRPA1-216ENST00000626000 DEF8Q6ZN54 512 aa12.42□□□□□ -0.42
SNRPA1-216ENST00000626000 NUFIP2Q7Z417 695 aaKnown RBP12.42□□□□□ -0.42
SNRPA1-216ENST00000626000 GPAT4Q86UL3 456 aa12.42□□□□□ -0.42
SNRPA1-216ENST00000626000 TMEM200AQ86VY9 491 aa12.42□□□□□ -0.42
SNRPA1-216ENST00000626000 ZNF295-AS1Q8N0V1 137 aa12.42□□□□□ -0.42
SNRPA1-216ENST00000626000 C10orf53Q8N6V4 93 aa12.42□□□□□ -0.42
SNRPA1-216ENST00000626000 TMEM99Q8N816 258 aa12.42□□□□□ -0.42
SNRPA1-216ENST00000626000 SLC25A36Q96CQ1 311 aa12.42□□□□□ -0.42
SNRPA1-216ENST00000626000 KTI12Q96EK9 354 aaPredicted RBP12.42□□□□□ -0.42
SNRPA1-216ENST00000626000 SLC41A3Q96GZ6 507 aa12.42□□□□□ -0.42
SNRPA1-216ENST00000626000 OXGR1Q96P68 337 aa12.42□□□□□ -0.42
SNRPA1-216ENST00000626000 ZNF426Q9BUY5 554 aa12.42□□□□□ -0.42
SNRPA1-216ENST00000626000 C1orf21Q9H246 121 aa12.42□□□□□ -0.42
SNRPA1-216ENST00000626000 ANKRD19PQ9H560 264 aa12.42□□□□□ -0.42
SNRPA1-216ENST00000626000 FKRPQ9H9S5 495 aa12.42□□□□□ -0.42
SNRPA1-216ENST00000626000 ASB6Q9NWX5 421 aa12.42□□□□□ -0.42
SNRPA1-216ENST00000626000 SLC7A7Q9UM01 511 aa12.42□□□□□ -0.42
SNRPA1-216ENST00000626000 PRPF19Q9UMS4 504 aaKnown RBP12.42□□□□□ -0.42
SNRPA1-216ENST00000626000 FAM32AQ9Y421 112 aaKnown RBP12.42□□□□□ -0.42
SNRPA1-216ENST00000626000 NOX1Q9Y5S8 564 aa12.42□□□□□ -0.42
SNRPA1-216ENST00000626000 CELSR2Q9HCU4 2923 aa12.41□□□□□ -0.42
SNRPA1-216ENST00000626000 IGKV1D-42A0A075B6H8 117 aa12.41□□□□□ -0.42
SNRPA1-216ENST00000626000 OR6A2O95222 327 aa12.41□□□□□ -0.42
SNRPA1-216ENST00000626000 STAMBPO95630 424 aa12.41□□□□□ -0.42
SNRPA1-216ENST00000626000 SERPINA1P01009 418 aa12.41□□□□□ -0.42
SNRPA1-216ENST00000626000 HIST1H2ABP04908 130 aa12.41□□□□□ -0.42
SNRPA1-216ENST00000626000 COX5AP20674 150 aa12.41□□□□□ -0.42
SNRPA1-216ENST00000626000 NR1H2P55055 460 aa12.41□□□□□ -0.42
SNRPA1-216ENST00000626000 NOTCH2Q04721 2471 aa12.41□□□□□ -0.42
SNRPA1-216ENST00000626000 C1DQ13901 141 aaKnown RBP12.41□□□□□ -0.42
SNRPA1-216ENST00000626000 MTX3Q5HYI7 312 aa12.41□□□□□ -0.42
SNRPA1-216ENST00000626000 SFRP5Q5T4F7 317 aa12.41□□□□□ -0.42
SNRPA1-216ENST00000626000 OR7E24Q6IFN5 339 aa12.41□□□□□ -0.42
SNRPA1-216ENST00000626000 HIST3H2AQ7L7L0 130 aa12.41□□□□□ -0.42
SNRPA1-216ENST00000626000 AAED1Q7RTV5 226 aa12.41□□□□□ -0.42
SNRPA1-216ENST00000626000 TRPM8Q7Z2W7 1104 aa12.41□□□□□ -0.42
SNRPA1-216ENST00000626000 CCDC103Q8IW40 242 aa12.41□□□□□ -0.42
SNRPA1-216ENST00000626000 DEFB107AQ8IZN7 70 aa12.41□□□□□ -0.42
SNRPA1-216ENST00000626000 OFCC1Q8IZS5 231 aa12.41□□□□□ -0.42
SNRPA1-216ENST00000626000 UBE2J2Q8N2K1 259 aa12.41□□□□□ -0.42
SNRPA1-216ENST00000626000 C1orf162Q8NEQ5 155 aaPredicted RBP12.41□□□□□ -0.42
SNRPA1-216ENST00000626000 ANKK1Q8NFD2 765 aa12.41□□□□□ -0.42
SNRPA1-216ENST00000626000 HSD17B8Q92506 261 aa12.41□□□□□ -0.42
SNRPA1-216ENST00000626000 HIST1H2ACQ93077 130 aa12.41□□□□□ -0.42
SNRPA1-216ENST00000626000 TAAR8Q969N4 342 aa12.41□□□□□ -0.42
SNRPA1-216ENST00000626000 CDRT15Q96T59 188 aa12.41□□□□□ -0.42
SNRPA1-216ENST00000626000 MOV10Q9HCE1 1003 aaKnown RBP12.41□□□□□ -0.42
SNRPA1-216ENST00000626000 NANSQ9NR45 359 aa12.41□□□□□ -0.42
SNRPA1-216ENST00000626000 DCAF13Q9NV06 445 aaKnown RBP12.41□□□□□ -0.42
SNRPA1-216ENST00000626000 TAS2R16Q9NYV7 291 aa12.41□□□□□ -0.42
SNRPA1-216ENST00000626000 UPB1Q9UBR1 384 aa12.41□□□□□ -0.42
SNRPA1-216ENST00000626000 RIMS3Q9UJD0 308 aa12.41□□□□□ -0.42
SNRPA1-216ENST00000626000 ZNF229Q9UJW7 825 aa12.41□□□□□ -0.42
SNRPA1-216ENST00000626000 USP22Q9UPT9 525 aa12.41□□□□□ -0.42
SNRPA1-216ENST00000626000 SNX13Q9Y5W8 968 aa12.41□□□□□ -0.42
SNRPA1-216ENST00000626000 B2RBV5 119 aa12.4□□□□□ -0.42
SNRPA1-216ENST00000626000 M0R082 166 aa12.4□□□□□ -0.42
SNRPA1-216ENST00000626000 CTAG2O75638 210 aa12.4□□□□□ -0.42
SNRPA1-216ENST00000626000 HOXB6P17509 224 aaKnown RBP12.4□□□□□ -0.42
SNRPA1-216ENST00000626000 CRYGSP22914 178 aa12.4□□□□□ -0.42
SNRPA1-216ENST00000626000 GRPRP30550 384 aa12.4□□□□□ -0.42
SNRPA1-216ENST00000626000 PMS2P3Q13401 168 aa12.4□□□□□ -0.42
SNRPA1-216ENST00000626000 CREB3L2Q70SY1 520 aa12.4□□□□□ -0.42
SNRPA1-216ENST00000626000 HDDC2Q7Z4H3 204 aa12.4□□□□□ -0.42
SNRPA1-216ENST00000626000 UEVLDQ8IX04 471 aa12.4□□□□□ -0.42
SNRPA1-216ENST00000626000 C17orf78Q8N4C9 275 aa12.4□□□□□ -0.42
SNRPA1-216ENST00000626000 OR4D11Q8NGI4 311 aa12.4□□□□□ -0.42
SNRPA1-216ENST00000626000 ZNF417Q8TAU3 575 aa12.4□□□□□ -0.42
SNRPA1-216ENST00000626000 MCUR1Q96AQ8 359 aa12.4□□□□□ -0.42
SNRPA1-216ENST00000626000 HSH2DQ96JZ2 352 aa12.4□□□□□ -0.42
SNRPA1-216ENST00000626000 NSMCE2Q96MF7 247 aa12.4□□□□□ -0.42
SNRPA1-216ENST00000626000 ZNF587Q96SQ5 575 aaPredicted RBP12.4□□□□□ -0.42
SNRPA1-216ENST00000626000 FNDC11Q9BVV2 318 aa12.4□□□□□ -0.42
SNRPA1-216ENST00000626000 PRR14Q9BWN1 585 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms