RNA–Protein interactions for RNA: ENST00000620219.4

CPSF1-213, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF1, Length 4,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-213ENST00000620219 NOVA1P51513 510 aaKnown RBP14.33□□□□□ -0.12
CPSF1-213ENST00000620219 CAV3P56539 151 aa14.33□□□□□ -0.12
CPSF1-213ENST00000620219 MOGQ16653 247 aa14.33□□□□□ -0.12
CPSF1-213ENST00000620219 ISXQ2M1V0 245 aa14.33□□□□□ -0.12
CPSF1-213ENST00000620219 RGS21Q2M5E4 152 aa14.33□□□□□ -0.12
CPSF1-213ENST00000620219 RNASE12Q5GAN4 147 aaKnown RBP14.33□□□□□ -0.12
CPSF1-213ENST00000620219 C1orf140Q5VVS0 124 aa14.33□□□□□ -0.12
CPSF1-213ENST00000620219 ZNF417Q8TAU3 575 aa14.33□□□□□ -0.12
CPSF1-213ENST00000620219 THAP4Q8WY91 577 aa14.33□□□□□ -0.12
CPSF1-213ENST00000620219 GNRHR2Q96P88 292 aa14.33□□□□□ -0.12
CPSF1-213ENST00000620219 ZNF587Q96SQ5 575 aaPredicted RBP14.33□□□□□ -0.12
CPSF1-213ENST00000620219 PCDHGA5Q9Y5G8 931 aa14.33□□□□□ -0.12
CPSF1-213ENST00000620219 CCDC187A0A096LP49 1063 aa14.33□□□□□ -0.12
CPSF1-213ENST00000620219 ARRDC5A6NEK1 342 aa14.33□□□□□ -0.12
CPSF1-213ENST00000620219 TRIM3O75382 744 aaPredicted RBP14.33□□□□□ -0.12
CPSF1-213ENST00000620219 AKR7A3O95154 331 aa14.33□□□□□ -0.12
CPSF1-213ENST00000620219 TGM4P49221 684 aa14.33□□□□□ -0.12
CPSF1-213ENST00000620219 ZNF846Q147U1 533 aa14.33□□□□□ -0.12
CPSF1-213ENST00000620219 EXT1Q16394 746 aa14.33□□□□□ -0.12
CPSF1-213ENST00000620219 ZNF544Q6NX49 715 aa14.33□□□□□ -0.12
CPSF1-213ENST00000620219 TSEN15Q8WW01 171 aaKnown RBP14.33□□□□□ -0.12
CPSF1-213ENST00000620219 TWSG1Q9GZX9 223 aa14.33□□□□□ -0.12
CPSF1-213ENST00000620219 EIF4E2O60573 245 aaKnown RBP14.33□□□□□ -0.12
CPSF1-213ENST00000620219 GDF1P27539 372 aa14.33□□□□□ -0.12
CPSF1-213ENST00000620219 SNRPGP62308 76 aaKnown RBP14.33□□□□□ -0.12
CPSF1-213ENST00000620219 PRKCDQ05655 676 aa14.33□□□□□ -0.12
CPSF1-213ENST00000620219 DNASE1L3Q13609 305 aa14.33□□□□□ -0.12
CPSF1-213ENST00000620219 INPP5JQ15735 1006 aaPredicted RBP14.33□□□□□ -0.12
CPSF1-213ENST00000620219 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.33□□□□□ -0.12
CPSF1-213ENST00000620219 OR1J4Q8NGS1 313 aa14.33□□□□□ -0.12
CPSF1-213ENST00000620219 P4HTMQ9NXG6 502 aa14.33□□□□□ -0.12
CPSF1-213ENST00000620219 IL20Q9NYY1 176 aa14.33□□□□□ -0.12
CPSF1-213ENST00000620219 BAIAP2Q9UQB8 552 aa14.33□□□□□ -0.12
CPSF1-213ENST00000620219 OTOGLQ3ZCN5 2332 aa14.32□□□□□ -0.12
CPSF1-213ENST00000620219 A0A087WUJ7 227 aa14.32□□□□□ -0.12
CPSF1-213ENST00000620219 TRIM64CA6NLI5 447 aa14.32□□□□□ -0.12
CPSF1-213ENST00000620219 TMCC2O75069 709 aa14.32□□□□□ -0.12
CPSF1-213ENST00000620219 THY1P04216 161 aa14.32□□□□□ -0.12
CPSF1-213ENST00000620219 ARSKQ6UWY0 536 aa14.32□□□□□ -0.12
CPSF1-213ENST00000620219 GRINAQ7Z429 371 aa14.32□□□□□ -0.12
CPSF1-213ENST00000620219 POC5Q8NA72 575 aa14.32□□□□□ -0.12
CPSF1-213ENST00000620219 MOGAT1Q96PD6 335 aa14.32□□□□□ -0.12
CPSF1-213ENST00000620219 NTMQ9P121 344 aa14.32□□□□□ -0.12
CPSF1-213ENST00000620219 ACAD8Q9UKU7 415 aa14.32□□□□□ -0.12
CPSF1-213ENST00000620219 SIGLEC7Q9Y286 467 aa14.32□□□□□ -0.12
CPSF1-213ENST00000620219 HEATR5AQ86XA9 2040 aa14.32□□□□□ -0.12
CPSF1-213ENST00000620219 ZNF670-ZNF695F2Z2N8 137 aa14.32□□□□□ -0.12
CPSF1-213ENST00000620219 TLX3O43711 291 aaPredicted RBP14.32□□□□□ -0.12
CPSF1-213ENST00000620219 APOA1P02647 267 aa14.32□□□□□ -0.12
CPSF1-213ENST00000620219 GRK5P34947 590 aa14.32□□□□□ -0.12
CPSF1-213ENST00000620219 ACAA2P42765 397 aaKnown RBP14.32□□□□□ -0.12
CPSF1-213ENST00000620219 DNASE1L1P49184 302 aa14.32□□□□□ -0.12
CPSF1-213ENST00000620219 IDNKQ5T6J7 187 aa14.32□□□□□ -0.12
CPSF1-213ENST00000620219 SLC46A3Q7Z3Q1 461 aa14.32□□□□□ -0.12
CPSF1-213ENST00000620219 KRT77Q7Z794 578 aa14.32□□□□□ -0.12
CPSF1-213ENST00000620219 FAM26EQ8N5C1 309 aa14.32□□□□□ -0.12
CPSF1-213ENST00000620219 OR2T4Q8NH00 348 aa14.32□□□□□ -0.12
CPSF1-213ENST00000620219 PCDHGB1Q9Y5G3 927 aa14.32□□□□□ -0.12
CPSF1-213ENST00000620219 SOX18P35713 384 aa14.32□□□□□ -0.12
CPSF1-213ENST00000620219 YRDCQ86U90 279 aaKnown RBP14.32□□□□□ -0.12
CPSF1-213ENST00000620219 MCEMP1Q8IX19 187 aa14.32□□□□□ -0.12
CPSF1-213ENST00000620219 OR2Y1Q8NGV0 311 aa14.32□□□□□ -0.12
CPSF1-213ENST00000620219 CT55Q8WUE5 264 aa14.32□□□□□ -0.12
CPSF1-213ENST00000620219 SPACA9Q96E40 222 aaPredicted RBP14.32□□□□□ -0.12
CPSF1-213ENST00000620219 DIRAS2Q96HU8 199 aa14.32□□□□□ -0.12
CPSF1-213ENST00000620219 CORINQ9Y5Q5 1042 aa14.32□□□□□ -0.12
CPSF1-213ENST00000620219 MPDZO75970 2070 aa14.32□□□□□ -0.12
CPSF1-213ENST00000620219 TRAV36DV7A0A075B6V5 113 aa14.31□□□□□ -0.12
CPSF1-213ENST00000620219 ICAM2P13598 275 aa14.31□□□□□ -0.12
CPSF1-213ENST00000620219 ZNF43P17038 809 aa14.31□□□□□ -0.12
CPSF1-213ENST00000620219 TALDO1P37837 337 aa14.31□□□□□ -0.12
CPSF1-213ENST00000620219 CLRN1P58418 232 aa14.31□□□□□ -0.12
CPSF1-213ENST00000620219 RPL18Q07020 188 aaKnown RBP14.31□□□□□ -0.12
CPSF1-213ENST00000620219 TAB1Q15750 504 aa14.31□□□□□ -0.12
CPSF1-213ENST00000620219 ZNF829Q3KNS6 432 aaPredicted RBP14.31□□□□□ -0.12
CPSF1-213ENST00000620219 BTLAQ7Z6A9 289 aa14.31□□□□□ -0.12
CPSF1-213ENST00000620219 C4orf36Q96KX1 117 aa14.31□□□□□ -0.12
CPSF1-213ENST00000620219 ZNF285Q96NJ3 590 aa14.31□□□□□ -0.12
CPSF1-213ENST00000620219 SPSB2Q99619 263 aa14.31□□□□□ -0.12
CPSF1-213ENST00000620219 SEC14L4Q9UDX3 406 aa14.31□□□□□ -0.12
CPSF1-213ENST00000620219 ARGFXA6NJG6 315 aa14.31□□□□□ -0.12
CPSF1-213ENST00000620219 A8MVM7 634 aa14.31□□□□□ -0.12
CPSF1-213ENST00000620219 SURF4O15260 269 aa14.31□□□□□ -0.12
CPSF1-213ENST00000620219 HLA-DPB1P04440 258 aa14.31□□□□□ -0.12
CPSF1-213ENST00000620219 CD14P08571 375 aa14.31□□□□□ -0.12
CPSF1-213ENST00000620219 NXNL2Q5VZ03 156 aa14.31□□□□□ -0.12
CPSF1-213ENST00000620219 C12orf73Q69YU5 71 aa14.31□□□□□ -0.12
CPSF1-213ENST00000620219 SLC35D2Q76EJ3 337 aa14.31□□□□□ -0.12
CPSF1-213ENST00000620219 PLCXD1Q9NUJ7 323 aa14.31□□□□□ -0.12
CPSF1-213ENST00000620219 ASB6Q9NWX5 421 aa14.31□□□□□ -0.12
CPSF1-213ENST00000620219 CRNNQ9UBG3 495 aaPredicted RBP14.31□□□□□ -0.12
CPSF1-213ENST00000620219 PCDHGA3Q9Y5H0 932 aa14.31□□□□□ -0.12
CPSF1-213ENST00000620219 DSPPQ9NZW4 1301 aa14.31□□□□□ -0.12
CPSF1-213ENST00000620219 LOC110117498-PIK3R3F6TDL0 507 aa14.31□□□□□ -0.12
CPSF1-213ENST00000620219 ADAM11O75078 769 aa14.31□□□□□ -0.12
CPSF1-213ENST00000620219 GABREP78334 506 aa14.31□□□□□ -0.12
CPSF1-213ENST00000620219 FOXF1Q12946 379 aa14.31□□□□□ -0.12
CPSF1-213ENST00000620219 HNRNPA0Q13151 305 aaKnown RBP14.31□□□□□ -0.12
CPSF1-213ENST00000620219 FAM69AQ5T7M9 428 aa14.31□□□□□ -0.12
CPSF1-213ENST00000620219 DTNBP1Q96EV8 351 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms