RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 PCDHGB7Q9Y5F8 929 aa23.12■■□□□ 1.29
VEGFC-202ENST00000618562 SIRT4Q9Y6E7 314 aaPredicted RBP23.12■■□□□ 1.29
VEGFC-202ENST00000618562 HTR3EA5X5Y0 456 aa23.12■■□□□ 1.29
VEGFC-202ENST00000618562 SLC2A2P11168 524 aaPredicted RBP23.12■■□□□ 1.29
VEGFC-202ENST00000618562 POU4F2Q12837 409 aa23.12■■□□□ 1.29
VEGFC-202ENST00000618562 ALG10BQ5I7T1 473 aa23.12■■□□□ 1.29
VEGFC-202ENST00000618562 CADM2Q8N3J6 435 aa23.12■■□□□ 1.29
VEGFC-202ENST00000618562 Q8N402 240 aa23.12■■□□□ 1.29
VEGFC-202ENST00000618562 NFAM1Q8NET5 270 aaPredicted RBP23.12■■□□□ 1.29
VEGFC-202ENST00000618562 OR5W2Q8NH69 310 aa23.12■■□□□ 1.29
VEGFC-202ENST00000618562 PMEPA1Q969W9 287 aa23.12■■□□□ 1.29
VEGFC-202ENST00000618562 LRFN5Q96NI6 719 aa23.12■■□□□ 1.29
VEGFC-202ENST00000618562 ADGRL4Q9HBW9 690 aa23.12■■□□□ 1.29
VEGFC-202ENST00000618562 NEK6Q9HC98 313 aa23.12■■□□□ 1.29
VEGFC-202ENST00000618562 PLPP2O43688 288 aa23.11■■□□□ 1.29
VEGFC-202ENST00000618562 ICOSLGO75144 302 aa23.11■■□□□ 1.29
VEGFC-202ENST00000618562 REM1O75628 298 aa23.11■■□□□ 1.29
VEGFC-202ENST00000618562 PPP1R3DO95685 299 aa23.11■■□□□ 1.29
VEGFC-202ENST00000618562 IFNGP01579 166 aa23.11■■□□□ 1.29
VEGFC-202ENST00000618562 HPGDP15428 266 aa23.11■■□□□ 1.29
VEGFC-202ENST00000618562 APEX1P27695 318 aaKnown RBP23.11■■□□□ 1.29
VEGFC-202ENST00000618562 EMP2P54851 167 aa23.11■■□□□ 1.29
VEGFC-202ENST00000618562 ACTC1P68032 377 aa23.11■■□□□ 1.29
VEGFC-202ENST00000618562 ACTA1P68133 377 aa23.11■■□□□ 1.29
VEGFC-202ENST00000618562 MC2RQ01718 297 aa23.11■■□□□ 1.29
VEGFC-202ENST00000618562 CRMP1Q14194 572 aa23.11■■□□□ 1.29
VEGFC-202ENST00000618562 TRIQKQ629K1 86 aa23.11■■□□□ 1.29
VEGFC-202ENST00000618562 LINC00114Q6XXX2 140 aa23.11■■□□□ 1.29
VEGFC-202ENST00000618562 APCDD1LQ8NCL9 501 aa23.11■■□□□ 1.29
VEGFC-202ENST00000618562 SEMA4CQ9C0C4 833 aa23.11■■□□□ 1.29
VEGFC-202ENST00000618562 OR51V1Q9H2C8 321 aa23.11■■□□□ 1.29
VEGFC-202ENST00000618562 SCDO00767 359 aa23.1■■□□□ 1.29
VEGFC-202ENST00000618562 PLA2G10O15496 165 aa23.1■■□□□ 1.29
VEGFC-202ENST00000618562 OIP5O43482 229 aa23.1■■□□□ 1.29
VEGFC-202ENST00000618562 TSPAN2O60636 221 aa23.1■■□□□ 1.29
VEGFC-202ENST00000618562 NOS3P29474 1203 aa23.1■■□□□ 1.29
VEGFC-202ENST00000618562 ZNF800Q2TB10 664 aaPredicted RBP eCLIP23.1■■□□□ 1.29
VEGFC-202ENST00000618562 MRPL14Q6P1L8 145 aaKnown RBP23.1■■□□□ 1.29
VEGFC-202ENST00000618562 METTL21AQ8WXB1 218 aa23.1■■□□□ 1.29
VEGFC-202ENST00000618562 MCCC2Q9HCC0 563 aa23.1■■□□□ 1.29
VEGFC-202ENST00000618562 B4DXG7 233 aa23.1■■□□□ 1.29
VEGFC-202ENST00000618562 NGFRP08138 427 aa23.1■■□□□ 1.29
VEGFC-202ENST00000618562 DDOSTP39656 456 aa23.1■■□□□ 1.29
VEGFC-202ENST00000618562 SLC16A1P53985 500 aa23.1■■□□□ 1.29
VEGFC-202ENST00000618562 FHL1Q13642 323 aa23.1■■□□□ 1.29
VEGFC-202ENST00000618562 ATAD3CQ5T2N8 411 aa23.1■■□□□ 1.29
VEGFC-202ENST00000618562 HBMQ6B0K9 141 aa23.1■■□□□ 1.29
VEGFC-202ENST00000618562 ULK3Q6PHR2 472 aa23.1■■□□□ 1.29
VEGFC-202ENST00000618562 C19orf18Q8NEA5 215 aa23.1■■□□□ 1.29
VEGFC-202ENST00000618562 C17orf47Q8NEP4 570 aa23.1■■□□□ 1.29
VEGFC-202ENST00000618562 ZNF486Q96H40 463 aaPredicted RBP23.1■■□□□ 1.29
VEGFC-202ENST00000618562 TNFRSF13CQ96RJ3 184 aa23.1■■□□□ 1.29
VEGFC-202ENST00000618562 WDR77Q9BQA1 342 aaPredicted RBP23.1■■□□□ 1.29
VEGFC-202ENST00000618562 MMP28Q9H239 520 aa23.1■■□□□ 1.29
VEGFC-202ENST00000618562 HMX3A6NHT5 357 aa23.09■■□□□ 1.29
VEGFC-202ENST00000618562 UBL4AP11441 157 aa23.09■■□□□ 1.29
VEGFC-202ENST00000618562 ABCD3P28288 659 aa23.09■■□□□ 1.29
VEGFC-202ENST00000618562 IL12BP29460 328 aa23.09■■□□□ 1.29
VEGFC-202ENST00000618562 RNF4P78317 190 aa23.09■■□□□ 1.29
VEGFC-202ENST00000618562 PLCXD2Q0VAA5 305 aa23.09■■□□□ 1.29
VEGFC-202ENST00000618562 SKP2Q13309 424 aa23.09■■□□□ 1.29
VEGFC-202ENST00000618562 IL18Q14116 193 aa23.09■■□□□ 1.29
VEGFC-202ENST00000618562 BCL2A1Q16548 175 aa23.09■■□□□ 1.29
VEGFC-202ENST00000618562 ZNF440Q8IYI8 595 aa23.09■■□□□ 1.29
VEGFC-202ENST00000618562 PHOSPHO1Q8TCT1 267 aa23.09■■□□□ 1.29
VEGFC-202ENST00000618562 KCTD12Q96CX2 325 aaKnown RBP23.09■■□□□ 1.29
VEGFC-202ENST00000618562 OMA1Q96E52 524 aa23.09■■□□□ 1.29
VEGFC-202ENST00000618562 ZC3HAV1LQ96H79 300 aaKnown RBP23.09■■□□□ 1.29
VEGFC-202ENST00000618562 RTN4RQ9BZR6 473 aa23.09■■□□□ 1.29
VEGFC-202ENST00000618562 TFECO14948 347 aaPredicted RBP23.09■■□□□ 1.29
VEGFC-202ENST00000618562 LCN1P31025 176 aa23.09■■□□□ 1.29
VEGFC-202ENST00000618562 CBLN3Q6UW01 205 aa23.09■■□□□ 1.29
VEGFC-202ENST00000618562 ENKURQ8TC29 256 aa23.09■■□□□ 1.29
VEGFC-202ENST00000618562 UBL7Q96S82 380 aaPredicted RBP23.09■■□□□ 1.29
VEGFC-202ENST00000618562 CRB3Q9BUF7 120 aa23.09■■□□□ 1.29
VEGFC-202ENST00000618562 RPS6KB2Q9UBS0 482 aa23.09■■□□□ 1.29
VEGFC-202ENST00000618562 PPIEQ9UNP9 301 aaKnown RBP23.09■■□□□ 1.29
VEGFC-202ENST00000618562 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.08■■□□□ 1.29
VEGFC-202ENST00000618562 CDX4O14627 284 aaPredicted RBP23.08■■□□□ 1.29
VEGFC-202ENST00000618562 NR4A2P43354 598 aa23.08■■□□□ 1.29
VEGFC-202ENST00000618562 NKX2-5P52952 324 aaPredicted RBP23.08■■□□□ 1.29
VEGFC-202ENST00000618562 P2RY14Q15391 338 aa23.08■■□□□ 1.29
VEGFC-202ENST00000618562 FCRLBQ6BAA4 426 aa23.08■■□□□ 1.29
VEGFC-202ENST00000618562 PAPD4Q6PIY7 484 aaKnown RBP23.08■■□□□ 1.29
VEGFC-202ENST00000618562 SMPDL3BQ92485 455 aa23.08■■□□□ 1.29
VEGFC-202ENST00000618562 RNF121Q9H920 327 aa23.08■■□□□ 1.29
VEGFC-202ENST00000618562 ZMIZ1Q9ULJ6 1067 aa23.08■■□□□ 1.29
VEGFC-202ENST00000618562 WDFY3Q8IZQ1 3526 aa23.08■■□□□ 1.29
VEGFC-202ENST00000618562 MRPL3P09001 348 aaKnown RBP23.07■■□□□ 1.28
VEGFC-202ENST00000618562 MAP2K3P46734 347 aa23.07■■□□□ 1.28
VEGFC-202ENST00000618562 ZNF85Q03923 595 aa23.07■■□□□ 1.28
VEGFC-202ENST00000618562 CRYZQ08257 329 aaKnown RBP23.07■■□□□ 1.28
VEGFC-202ENST00000618562 SF3A2Q15428 464 aaKnown RBP23.07■■□□□ 1.28
VEGFC-202ENST00000618562 MZT2BQ6NZ67 158 aa23.07■■□□□ 1.28
VEGFC-202ENST00000618562 FAM199XQ6PEV8 388 aaPredicted RBP23.07■■□□□ 1.28
VEGFC-202ENST00000618562 ARL9Q6T311 187 aa23.07■■□□□ 1.28
VEGFC-202ENST00000618562 VASH1Q7L8A9 365 aaPredicted RBP23.07■■□□□ 1.28
VEGFC-202ENST00000618562 TPRA1Q86W33 373 aa23.07■■□□□ 1.28
VEGFC-202ENST00000618562 ST6GAL2Q96JF0 529 aa23.07■■□□□ 1.28
VEGFC-202ENST00000618562 FRMD6Q96NE9 622 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms