RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 CREB3L4Q8TEY5 395 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 SMIM4Q8WVI0 70 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 RAB24Q969Q5 203 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 GCM1Q9NP62 436 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 SLC35D1Q9NTN3 355 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 SERTAD4Q9NUC0 356 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 SCN5AQ14524 2016 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 TBC1D3KA0A087X1G2 549 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 A0A0U1RQK1 487 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 TBC1D3FA6NER0 549 aaPredicted RBP8.2□□□□□ -1.1
TTC28-208ENST00000612946 UPK3BL1B0FP48 263 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 UPK3BL2E5RIL1 263 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 AIFM1O95831 613 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 SCAND1P57086 179 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 UBE2IP63279 158 aaKnown RBP8.2□□□□□ -1.1
TTC28-208ENST00000612946 SIRPAP78324 504 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 FAM209BQ5JX69 171 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 TBC1D3GQ6DHY5 549 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 TSTD1Q8NFU3 115 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 UBTD2Q8WUN7 234 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 DPH2Q9BQC3 489 aaPredicted RBP8.2□□□□□ -1.1
TTC28-208ENST00000612946 PKIBQ9C010 78 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 OR10A5Q9H207 317 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 SLCO1B1Q9Y6L6 691 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 ACOD1A6NK06 481 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 SDHAP31040 664 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 GPR4P46093 362 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 RPUSD3Q6P087 351 aaKnown RBP8.19□□□□□ -1.1
TTC28-208ENST00000612946 GDPD4Q6W3E5 623 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 TRAPPC6BQ86SZ2 158 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 OR2G3Q8NGZ4 309 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 PMM1Q92871 262 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 DNMT3AQ9Y6K1 912 aaPredicted RBP8.19□□□□□ -1.1
TTC28-208ENST00000612946 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.19□□□□□ -1.1
TTC28-208ENST00000612946 A8MX80 341 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 PGCP20142 388 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 GATMP50440 423 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 LKAAEAR1Q8TD35 194 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 ZNF689Q96CS4 500 aaPredicted RBP8.19□□□□□ -1.1
TTC28-208ENST00000612946 SLC41A2Q96JW4 573 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 OR10A2Q9H208 303 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 TMEM38AQ9H6F2 299 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 IGLV3-22A0A075B6J6 115 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 CHRM2P08172 466 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 ISL1P61371 349 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 PDE7AQ13946 482 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 RCBTB1Q8NDN9 531 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 MIOXQ9UGB7 285 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 CSO75390 466 aaKnown RBP8.19□□□□□ -1.1
TTC28-208ENST00000612946 FBP1P09467 338 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 SERPINA2P20848 420 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 TOMM34Q15785 309 aaPredicted RBP8.19□□□□□ -1.1
TTC28-208ENST00000612946 SERINC5Q86VE9 423 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 PXYLP1Q8TE99 480 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 ATG101Q9BSB4 218 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 YJEFN3A6XGL0 299 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 SIM1P81133 766 aaPredicted RBP8.19□□□□□ -1.1
TTC28-208ENST00000612946 FABP9Q0Z7S8 132 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 ELOCQ15369 112 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 MAMDC4Q6UXC1 1216 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 LGI3Q8N145 548 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 CLSTN3Q9BQT9 956 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 REV1Q9UBZ9 1251 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 MEIS3P1A6NDR6 274 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 ZNF814B7Z6K7 855 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 CLDN5O00501 218 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 GPR37L1O60883 481 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 SELENOVP59797 346 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 RACK1P63244 317 aaKnown RBP8.19□□□□□ -1.1
TTC28-208ENST00000612946 HTRA3P83110 453 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 GBX1Q14549 363 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 FFAR4Q5NUL3 377 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 FAM129CQ86XR2 697 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 FUBP1Q96AE4 644 aaKnown RBP8.19□□□□□ -1.1
TTC28-208ENST00000612946 DDIT4LQ96D03 193 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 METTL9Q9H1A3 318 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 DDX31Q9H8H2 851 aaKnown RBP8.19□□□□□ -1.1
TTC28-208ENST00000612946 RAB27BO00194 218 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 APBB3O95704 486 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 CD99P14209 185 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 CBR1P16152 277 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 EVX1P49640 407 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 ODF4Q2M2E3 257 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 LEG1Q6P5S2 330 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 C12orf42Q96LP6 360 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 CASD1Q96PB1 797 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 GPR173Q9NS66 373 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 AK3Q9UIJ7 227 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 RIPK3Q9Y572 518 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 SLC22A20A6NK97 555 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 LEUTXA8MZ59 168 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 FBXO48Q5FWF7 155 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 TOMM20LQ6UXN7 152 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 SLC39A11Q8N1S5 342 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 TFGQ92734 400 aaPredicted RBP8.19□□□□□ -1.1
TTC28-208ENST00000612946 TAAR9Q96RI9 348 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 KCNJ15Q99712 375 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 DCAF16Q9NXF7 216 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 SMCHD1A6NHR9 2005 aa8.19□□□□□ -1.1
TTC28-208ENST00000612946 CCL22O00626 93 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms