RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 C3orf49Q96BT1 292 aa18.59■□□□□ 0.57
PPFIA3-209ENST00000602783 SLC52A3Q9NQ40 469 aa18.59■□□□□ 0.57
PPFIA3-209ENST00000602783 VAPAQ9P0L0 249 aa18.59■□□□□ 0.57
PPFIA3-209ENST00000602783 DCTN4Q9UJW0 460 aa18.59■□□□□ 0.57
PPFIA3-209ENST00000602783 PRDM4Q9UKN5 801 aa18.59■□□□□ 0.57
PPFIA3-209ENST00000602783 IGHV4-30-2A0A087WSY4 118 aa18.58■□□□□ 0.56
PPFIA3-209ENST00000602783 AKR7A3O95154 331 aa18.58■□□□□ 0.56
PPFIA3-209ENST00000602783 ARAFP10398 606 aa18.58■□□□□ 0.56
PPFIA3-209ENST00000602783 RAB35Q15286 201 aa18.58■□□□□ 0.56
PPFIA3-209ENST00000602783 GCNT6Q5T4J0 391 aa18.58■□□□□ 0.56
PPFIA3-209ENST00000602783 TMEM99Q8N816 258 aa18.58■□□□□ 0.56
PPFIA3-209ENST00000602783 HTRA1Q92743 480 aa18.58■□□□□ 0.56
PPFIA3-209ENST00000602783 AMBRA1Q9C0C7 1298 aa18.58■□□□□ 0.56
PPFIA3-209ENST00000602783 VIPAS39Q9H9C1 493 aa18.58■□□□□ 0.56
PPFIA3-209ENST00000602783 SLC17A5Q9NRA2 495 aa18.58■□□□□ 0.56
PPFIA3-209ENST00000602783 ATP23Q9Y6H3 246 aa18.58■□□□□ 0.56
PPFIA3-209ENST00000602783 FBN1P35555 2871 aaKnown RBP18.58■□□□□ 0.56
PPFIA3-209ENST00000602783 TRBV5-3A0A0A0MS03 114 aa18.57■□□□□ 0.56
PPFIA3-209ENST00000602783 AQP7P3A6NL99 342 aa18.57■□□□□ 0.56
PPFIA3-209ENST00000602783 A8MVM7 634 aa18.57■□□□□ 0.56
PPFIA3-209ENST00000602783 TMEM229AB2RXF0 380 aa18.57■□□□□ 0.56
PPFIA3-209ENST00000602783 GPRIN2O60269 458 aa18.57■□□□□ 0.56
PPFIA3-209ENST00000602783 PPIBP23284 216 aaKnown RBP18.57■□□□□ 0.56
PPFIA3-209ENST00000602783 HOXC5Q00444 222 aa18.57■□□□□ 0.56
PPFIA3-209ENST00000602783 TGFBR3Q03167 851 aa18.57■□□□□ 0.56
PPFIA3-209ENST00000602783 C1orf140Q5VVS0 124 aa18.57■□□□□ 0.56
PPFIA3-209ENST00000602783 CXXC5Q7LFL8 322 aaKnown RBP18.57■□□□□ 0.56
PPFIA3-209ENST00000602783 AAED1Q7RTV5 226 aa18.57■□□□□ 0.56
PPFIA3-209ENST00000602783 C17orf78Q8N4C9 275 aa18.57■□□□□ 0.56
PPFIA3-209ENST00000602783 C1orf162Q8NEQ5 155 aaPredicted RBP18.57■□□□□ 0.56
PPFIA3-209ENST00000602783 OR10H5Q8NGA6 315 aa18.57■□□□□ 0.56
PPFIA3-209ENST00000602783 OR9K2Q8NGE7 335 aa18.57■□□□□ 0.56
PPFIA3-209ENST00000602783 CKAP2Q8WWK9 683 aa18.57■□□□□ 0.56
PPFIA3-209ENST00000602783 THOC1Q96FV9 657 aaKnown RBP18.57■□□□□ 0.56
PPFIA3-209ENST00000602783 MAGEB18Q96M61 343 aa18.57■□□□□ 0.56
PPFIA3-209ENST00000602783 TAPBPLQ9BX59 468 aa18.57■□□□□ 0.56
PPFIA3-209ENST00000602783 IKZF5Q9H5V7 419 aa18.57■□□□□ 0.56
PPFIA3-209ENST00000602783 ARGLU1Q9NWB6 273 aaPredicted RBP18.57■□□□□ 0.56
PPFIA3-209ENST00000602783 ADPRHL2Q9NX46 363 aa18.57■□□□□ 0.56
PPFIA3-209ENST00000602783 AMDHD2Q9Y303 409 aa18.57■□□□□ 0.56
PPFIA3-209ENST00000602783 ETS2P15036 469 aa18.56■□□□□ 0.56
PPFIA3-209ENST00000602783 H2AFXP16104 143 aaPredicted RBP18.56■□□□□ 0.56
PPFIA3-209ENST00000602783 CDH2P19022 906 aaPredicted RBP18.56■□□□□ 0.56
PPFIA3-209ENST00000602783 MPGP29372 298 aa18.56■□□□□ 0.56
PPFIA3-209ENST00000602783 SLC25A3Q00325 362 aa18.56■□□□□ 0.56
PPFIA3-209ENST00000602783 ZNF544Q6NX49 715 aa18.56■□□□□ 0.56
PPFIA3-209ENST00000602783 CLEC2AQ6UVW9 174 aa18.56■□□□□ 0.56
PPFIA3-209ENST00000602783 GPAT4Q86UL3 456 aa18.56■□□□□ 0.56
PPFIA3-209ENST00000602783 ZIC4Q8N9L1 334 aa18.56■□□□□ 0.56
PPFIA3-209ENST00000602783 SLC35B4Q969S0 331 aa18.56■□□□□ 0.56
PPFIA3-209ENST00000602783 TMEM45BQ96B21 275 aa18.56■□□□□ 0.56
PPFIA3-209ENST00000602783 ZNF385AQ96PM9 386 aaKnown RBP18.56■□□□□ 0.56
PPFIA3-209ENST00000602783 SF3B5Q9BWJ5 86 aaKnown RBP18.56■□□□□ 0.56
PPFIA3-209ENST00000602783 FKRPQ9H9S5 495 aa18.56■□□□□ 0.56
PPFIA3-209ENST00000602783 TMEM45AQ9NWC5 275 aa18.56■□□□□ 0.56
PPFIA3-209ENST00000602783 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.56■□□□□ 0.56
PPFIA3-209ENST00000602783 PRKAR1BP31321 381 aa18.55■□□□□ 0.56
PPFIA3-209ENST00000602783 DSCR9P59020 149 aa18.55■□□□□ 0.56
PPFIA3-209ENST00000602783 PRPS1P60891 318 aa18.55■□□□□ 0.56
PPFIA3-209ENST00000602783 CDK6Q00534 326 aa18.55■□□□□ 0.56
PPFIA3-209ENST00000602783 TMEM225Q6GV28 225 aa18.55■□□□□ 0.56
PPFIA3-209ENST00000602783 HMBOX1Q6NT76 420 aa18.55■□□□□ 0.56
PPFIA3-209ENST00000602783 COMTD1Q86VU5 262 aa18.55■□□□□ 0.56
PPFIA3-209ENST00000602783 HIPK1Q86Z02 1210 aa18.55■□□□□ 0.56
PPFIA3-209ENST00000602783 SPATA3Q8NHX4 192 aa18.55■□□□□ 0.56
PPFIA3-209ENST00000602783 RSPO3Q9BXY4 272 aaPredicted RBP18.55■□□□□ 0.56
PPFIA3-209ENST00000602783 GMEB1Q9Y692 573 aa18.55■□□□□ 0.56
PPFIA3-209ENST00000602783 NPIPB7O75200 414 aa18.54■□□□□ 0.56
PPFIA3-209ENST00000602783 AHSA1O95433 338 aa18.54■□□□□ 0.56
PPFIA3-209ENST00000602783 P2RY4P51582 365 aa18.54■□□□□ 0.56
PPFIA3-209ENST00000602783 SCARB2Q14108 478 aa18.54■□□□□ 0.56
PPFIA3-209ENST00000602783 REEP3Q6NUK4 255 aa18.54■□□□□ 0.56
PPFIA3-209ENST00000602783 KRT73Q86Y46 540 aa18.54■□□□□ 0.56
PPFIA3-209ENST00000602783 POMGNT2Q8NAT1 580 aa18.54■□□□□ 0.56
PPFIA3-209ENST00000602783 STK35Q8TDR2 534 aa18.54■□□□□ 0.56
PPFIA3-209ENST00000602783 STON2Q8WXE9 905 aa18.54■□□□□ 0.56
PPFIA3-209ENST00000602783 CPPED1Q9BRF8 314 aaPredicted RBP18.54■□□□□ 0.56
PPFIA3-209ENST00000602783 RPS6KB2Q9UBS0 482 aa18.54■□□□□ 0.56
PPFIA3-209ENST00000602783 CORO2BQ9UQ03 480 aa18.54■□□□□ 0.56
PPFIA3-209ENST00000602783 A0A096LNT2 108 aa18.53■□□□□ 0.56
PPFIA3-209ENST00000602783 A8MV72 311 aaPredicted RBP18.53■□□□□ 0.56
PPFIA3-209ENST00000602783 H7C417 338 aa18.53■□□□□ 0.56
PPFIA3-209ENST00000602783 KRT33AO76009 404 aa18.53■□□□□ 0.56
PPFIA3-209ENST00000602783 WNT11O96014 354 aa18.53■□□□□ 0.56
PPFIA3-209ENST00000602783 BMP4P12644 408 aa18.53■□□□□ 0.56
PPFIA3-209ENST00000602783 APOBEC3AP31941 199 aaPredicted RBP18.53■□□□□ 0.56
PPFIA3-209ENST00000602783 CHRNB3Q05901 458 aa18.53■□□□□ 0.56
PPFIA3-209ENST00000602783 HIKESHIQ53FT3 197 aa18.53■□□□□ 0.56
PPFIA3-209ENST00000602783 DHRS4L2Q6PKH6 230 aa18.53■□□□□ 0.56
PPFIA3-209ENST00000602783 KLHL24Q6TFL4 600 aa18.53■□□□□ 0.56
PPFIA3-209ENST00000602783 ZNF525Q8N782 197 aa18.53■□□□□ 0.56
PPFIA3-209ENST00000602783 TNFRSF13CQ96RJ3 184 aa18.53■□□□□ 0.56
PPFIA3-209ENST00000602783 SPATA5L1Q9BVQ7 753 aa18.53■□□□□ 0.56
PPFIA3-209ENST00000602783 RABEP2Q9H5N1 569 aa18.53■□□□□ 0.56
PPFIA3-209ENST00000602783 PIF1Q9H611 641 aa18.53■□□□□ 0.56
PPFIA3-209ENST00000602783 ZNF385DQ9H6B1 395 aa18.53■□□□□ 0.56
PPFIA3-209ENST00000602783 TMEM38AQ9H6F2 299 aa18.53■□□□□ 0.56
PPFIA3-209ENST00000602783 NPHS2Q9NP85 383 aa18.53■□□□□ 0.56
PPFIA3-209ENST00000602783 ELOA3DA6NLF2 546 aaPredicted RBP18.52■□□□□ 0.56
PPFIA3-209ENST00000602783 EVPLLA8MZ36 301 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms