RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 TRAPPC2BP0DI82 140 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 SOX9P48436 509 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 SUMO1P63165 101 aaKnown RBP8.13□□□□□ -1.11
CSMD1-216ENST00000602557 OR6V1Q8N148 313 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 BPIFB2Q8N4F0 458 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 SLC7A13Q8TCU3 470 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 OR5M11Q96RB7 305 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 PAAF1Q9BRP4 392 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 PARD6AQ9NPB6 346 aa8.13□□□□□ -1.11
CSMD1-216ENST00000602557 DUSP7Q16829 419 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 TOMM20LQ6UXN7 152 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 TP53INP2Q8IXH6 220 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 WDTC1Q8N5D0 677 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 OR8U1Q8NH10 309 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 SFXN5Q8TD22 340 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 RAB7BQ96AH8 199 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 A0A0U1RQS6 177 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 NPBWR1P48145 328 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 CTXN1P60606 82 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 GPLD1P80108 840 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 GBX1Q14549 363 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 FCRLAQ7L513 359 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 SIGLECL1Q8N7X8 197 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 CCDC71LQ8N9Z2 235 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 APIPQ96GX9 242 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 FOXN4Q96NZ1 517 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 SLAMF8Q9P0V8 285 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 RHBDD3Q9Y3P4 386 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 SLC22A23A1A5C7 686 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 SLC9B1P1A6NJY1 282 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 SPI1P17947 270 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 GABRR1P24046 479 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 SLC22A6Q4U2R8 563 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 AMIGO3Q86WK7 504 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 OR7D2Q96RA2 312 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 APOBEC3BQ9UH17 382 aaKnown RBP8.12□□□□□ -1.11
CSMD1-216ENST00000602557 SIM1P81133 766 aaPredicted RBP8.12□□□□□ -1.11
CSMD1-216ENST00000602557 C1orf61Q13536 156 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 BTLAQ7Z6A9 289 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 SPATA6Q9NWH7 488 aaPredicted RBP8.12□□□□□ -1.11
CSMD1-216ENST00000602557 IRF2P14316 349 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 EPHA4P54764 986 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 PIN1Q13526 163 aaPredicted RBP8.12□□□□□ -1.11
CSMD1-216ENST00000602557 TESK1Q15569 626 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 SFRP5Q5T4F7 317 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 SULF2Q8IWU5 870 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 TMED6Q8WW62 240 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 USB1Q9BQ65 265 aaKnown RBP8.12□□□□□ -1.11
CSMD1-216ENST00000602557 BCO1Q9HAY6 547 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 F5H5K5 113 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 NSA2O95478 260 aaKnown RBP8.12□□□□□ -1.11
CSMD1-216ENST00000602557 MT-CO2P00403 227 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 AK1P00568 194 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 MLLT11Q13015 90 aaPredicted RBP8.12□□□□□ -1.11
CSMD1-216ENST00000602557 AAK1Q2M2I8 961 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.12□□□□□ -1.11
CSMD1-216ENST00000602557 EHFQ9NZC4 300 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 A6NCN8 305 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 CCNJQ5T5M9 372 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 ISCA2Q86U28 154 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 C12orf76Q8N812 135 aaPredicted RBP8.12□□□□□ -1.11
CSMD1-216ENST00000602557 FKRPQ9H9S5 495 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 SH3BGRL2Q9UJC5 107 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 C10orf71Q711Q0 1435 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 NBASA2RRP1 2371 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 TCF21O43680 179 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 CSO75390 466 aaKnown RBP8.12□□□□□ -1.11
CSMD1-216ENST00000602557 PTGER1P34995 402 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 SEC61A1P61619 476 aaKnown RBP8.12□□□□□ -1.11
CSMD1-216ENST00000602557 PLGLAQ15195 96 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 CTU2Q2VPK5 515 aaKnown RBP8.12□□□□□ -1.11
CSMD1-216ENST00000602557 CDH26Q8IXH8 852 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 COMMD1Q8N668 190 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 OR1E3Q8WZA6 343 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 SENP5Q96HI0 755 aaPredicted RBP8.12□□□□□ -1.11
CSMD1-216ENST00000602557 HCAR1Q9BXC0 346 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 HAO2Q9NYQ3 351 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 PAX6P26367 422 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 IVDP26440 423 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 CD80P33681 288 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 KRTDAPP60985 99 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 EXOSC6Q5RKV6 272 aaKnown RBP8.12□□□□□ -1.11
CSMD1-216ENST00000602557 PIP5KL1Q5T9C9 394 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 ZBTB37Q5TC79 503 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 OR5L2Q8NGL0 311 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 SPTSSAQ969W0 71 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 GPR62Q9BZJ7 368 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 KLHL13Q9P2N7 655 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 EMCNQ9ULC0 261 aa8.12□□□□□ -1.11
CSMD1-216ENST00000602557 CD300LBA8K4G0 201 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 ANKRD28O15084 1053 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 GYPBP06028 91 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 JAG1P78504 1218 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 ZNF239Q16600 458 aaKnown RBP8.11□□□□□ -1.11
CSMD1-216ENST00000602557 HACD4Q5VWC8 232 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 ELOVL1Q9BW60 279 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 AKIP1Q9NQ31 210 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 ABRACLQ9P1F3 81 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 CLEC2DQ9UHP7 191 aa8.11□□□□□ -1.11
CSMD1-216ENST00000602557 A0A087X0M5 115 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms