RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 TACC2O95359 2948 aa14.92□□□□□ -0.02
TRIM28-215ENST00000601150 LYPD3O95274 346 aa14.91□□□□□ -0.02
TRIM28-215ENST00000601150 IL32P24001 234 aa14.91□□□□□ -0.02
TRIM28-215ENST00000601150 NTF4P34130 210 aa14.91□□□□□ -0.02
TRIM28-215ENST00000601150 SELENOWP63302 87 aa14.91□□□□□ -0.02
TRIM28-215ENST00000601150 ITGADQ13349 1161 aa14.91□□□□□ -0.02
TRIM28-215ENST00000601150 MFSD13AQ14CX5 517 aa14.91□□□□□ -0.02
TRIM28-215ENST00000601150 FBXW9Q5XUX1 488 aa14.91□□□□□ -0.02
TRIM28-215ENST00000601150 TSPYL5Q86VY4 417 aaPredicted RBP14.91□□□□□ -0.02
TRIM28-215ENST00000601150 UBE2J2Q8N2K1 259 aa14.91□□□□□ -0.02
TRIM28-215ENST00000601150 CCDC197Q8NCU1 140 aa14.91□□□□□ -0.02
TRIM28-215ENST00000601150 KISS1RQ969F8 398 aaPredicted RBP14.91□□□□□ -0.02
TRIM28-215ENST00000601150 TMEM45BQ96B21 275 aa14.91□□□□□ -0.02
TRIM28-215ENST00000601150 ZC3HAV1LQ96H79 300 aaKnown RBP14.91□□□□□ -0.02
TRIM28-215ENST00000601150 MPP4Q96JB8 637 aa14.91□□□□□ -0.02
TRIM28-215ENST00000601150 POLR2J2Q9GZM3 115 aaKnown RBP14.91□□□□□ -0.02
TRIM28-215ENST00000601150 POLR2J3Q9H1A7 115 aaKnown RBP14.91□□□□□ -0.02
TRIM28-215ENST00000601150 ANKRD17O75179 2603 aaKnown RBP14.9□□□□□ -0.02
TRIM28-215ENST00000601150 M0R082 166 aa14.9□□□□□ -0.02
TRIM28-215ENST00000601150 IGHV3-9P01782 118 aa14.9□□□□□ -0.02
TRIM28-215ENST00000601150 THY1P04216 161 aa14.9□□□□□ -0.02
TRIM28-215ENST00000601150 PTNP21246 168 aa14.9□□□□□ -0.02
TRIM28-215ENST00000601150 CRYGSP22914 178 aa14.9□□□□□ -0.02
TRIM28-215ENST00000601150 GRPRP30550 384 aa14.9□□□□□ -0.02
TRIM28-215ENST00000601150 OR1E2P47887 323 aa14.9□□□□□ -0.02
TRIM28-215ENST00000601150 TAS2R41P59536 307 aa14.9□□□□□ -0.02
TRIM28-215ENST00000601150 KRT72Q14CN4 511 aa14.9□□□□□ -0.02
TRIM28-215ENST00000601150 POU4F3Q15319 338 aa14.9□□□□□ -0.02
TRIM28-215ENST00000601150 TTC33Q6PID6 262 aaPredicted RBP14.9□□□□□ -0.02
TRIM28-215ENST00000601150 WDR88Q6ZMY6 472 aa14.9□□□□□ -0.02
TRIM28-215ENST00000601150 DEF8Q6ZN54 512 aa14.9□□□□□ -0.02
TRIM28-215ENST00000601150 FITM2Q8N6M3 262 aa14.9□□□□□ -0.02
TRIM28-215ENST00000601150 ZIC4Q8N9L1 334 aa14.9□□□□□ -0.02
TRIM28-215ENST00000601150 ZNF417Q8TAU3 575 aa14.9□□□□□ -0.02
TRIM28-215ENST00000601150 S100PBPQ96BU1 408 aa14.9□□□□□ -0.02
TRIM28-215ENST00000601150 SLC41A3Q96GZ6 507 aa14.9□□□□□ -0.02
TRIM28-215ENST00000601150 ZNF587Q96SQ5 575 aaPredicted RBP14.9□□□□□ -0.02
TRIM28-215ENST00000601150 USB1Q9BQ65 265 aaKnown RBP14.9□□□□□ -0.02
TRIM28-215ENST00000601150 B3GALT5Q9Y2C3 310 aa14.9□□□□□ -0.02
TRIM28-215ENST00000601150 CORINQ9Y5Q5 1042 aa14.9□□□□□ -0.02
TRIM28-215ENST00000601150 PDZD2O15018 2839 aa14.9□□□□□ -0.02
TRIM28-215ENST00000601150 OR5F1O95221 314 aa14.89□□□□□ -0.03
TRIM28-215ENST00000601150 ZNF682O95780 498 aa14.89□□□□□ -0.03
TRIM28-215ENST00000601150 BGLAPP02818 100 aa14.89□□□□□ -0.03
TRIM28-215ENST00000601150 HRGP04196 525 aa14.89□□□□□ -0.03
TRIM28-215ENST00000601150 THBDP07204 575 aa14.89□□□□□ -0.03
TRIM28-215ENST00000601150 COX5AP20674 150 aa14.89□□□□□ -0.03
TRIM28-215ENST00000601150 CBLP22681 906 aa14.89□□□□□ -0.03
TRIM28-215ENST00000601150 MNAT1P51948 309 aa14.89□□□□□ -0.03
TRIM28-215ENST00000601150 TSC22D1Q15714 1073 aa14.89□□□□□ -0.03
TRIM28-215ENST00000601150 C22orf34Q6ZV56 151 aa14.89□□□□□ -0.03
TRIM28-215ENST00000601150 CREB3L2Q70SY1 520 aa14.89□□□□□ -0.03
TRIM28-215ENST00000601150 H1FNTQ75WM6 255 aaPredicted RBP14.89□□□□□ -0.03
TRIM28-215ENST00000601150 BHLHA15Q7RTS1 189 aaPredicted RBP14.89□□□□□ -0.03
TRIM28-215ENST00000601150 AAED1Q7RTV5 226 aa14.89□□□□□ -0.03
TRIM28-215ENST00000601150 CDC20BQ86Y33 519 aa14.89□□□□□ -0.03
TRIM28-215ENST00000601150 PGAM4Q8N0Y7 254 aa14.89□□□□□ -0.03
TRIM28-215ENST00000601150 C10orf53Q8N6V4 93 aa14.89□□□□□ -0.03
TRIM28-215ENST00000601150 ADPRHL1Q8NDY3 354 aa14.89□□□□□ -0.03
TRIM28-215ENST00000601150 FAM162AQ96A26 154 aa14.89□□□□□ -0.03
TRIM28-215ENST00000601150 OXGR1Q96P68 337 aa14.89□□□□□ -0.03
TRIM28-215ENST00000601150 ZNF385AQ96PM9 386 aaKnown RBP14.89□□□□□ -0.03
TRIM28-215ENST00000601150 ASPNQ9BXN1 380 aa14.89□□□□□ -0.03
TRIM28-215ENST00000601150 ASB6Q9NWX5 421 aa14.89□□□□□ -0.03
TRIM28-215ENST00000601150 NDE1Q9NXR1 346 aa14.89□□□□□ -0.03
TRIM28-215ENST00000601150 SEC14L4Q9UDX3 406 aa14.89□□□□□ -0.03
TRIM28-215ENST00000601150 MALT1Q9UDY8 824 aa14.89□□□□□ -0.03
TRIM28-215ENST00000601150 HRNRQ86YZ3 2850 aaPredicted RBP14.89□□□□□ -0.03
TRIM28-215ENST00000601150 LYZL6O75951 148 aa14.88□□□□□ -0.03
TRIM28-215ENST00000601150 MT-ATP6P00846 226 aa14.88□□□□□ -0.03
TRIM28-215ENST00000601150 SERPINA1P01009 418 aa14.88□□□□□ -0.03
TRIM28-215ENST00000601150 NQO1P15559 274 aaKnown RBP14.88□□□□□ -0.03
TRIM28-215ENST00000601150 NCK1P16333 377 aa14.88□□□□□ -0.03
TRIM28-215ENST00000601150 ZNF43P17038 809 aa14.88□□□□□ -0.03
TRIM28-215ENST00000601150 GGT1P19440 569 aa14.88□□□□□ -0.03
TRIM28-215ENST00000601150 IGHV1-2P23083 117 aa14.88□□□□□ -0.03
TRIM28-215ENST00000601150 MXRA7P84157 204 aa14.88□□□□□ -0.03
TRIM28-215ENST00000601150 LTBQ06643 244 aa14.88□□□□□ -0.03
TRIM28-215ENST00000601150 C16orf89Q6UX73 402 aa14.88□□□□□ -0.03
TRIM28-215ENST00000601150 CBLL1Q75N03 491 aa14.88□□□□□ -0.03
TRIM28-215ENST00000601150 VTCN1Q7Z7D3 282 aa14.88□□□□□ -0.03
TRIM28-215ENST00000601150 CDH24Q86UP0 819 aa14.88□□□□□ -0.03
TRIM28-215ENST00000601150 EPHX4Q8IUS5 362 aa14.88□□□□□ -0.03
TRIM28-215ENST00000601150 KDM8Q8N371 416 aa14.88□□□□□ -0.03
TRIM28-215ENST00000601150 RNF148Q8N7C7 305 aa14.88□□□□□ -0.03
TRIM28-215ENST00000601150 SCAIQ8N9R8 606 aa14.88□□□□□ -0.03
TRIM28-215ENST00000601150 MOGAT1Q96PD6 335 aa14.88□□□□□ -0.03
TRIM28-215ENST00000601150 PRSS27Q9BQR3 290 aa14.88□□□□□ -0.03
TRIM28-215ENST00000601150 ZNF426Q9BUY5 554 aa14.88□□□□□ -0.03
TRIM28-215ENST00000601150 SLC19A3Q9BZV2 496 aa14.88□□□□□ -0.03
TRIM28-215ENST00000601150 UPB1Q9UBR1 384 aa14.88□□□□□ -0.03
TRIM28-215ENST00000601150 RIMS3Q9UJD0 308 aa14.88□□□□□ -0.03
TRIM28-215ENST00000601150 LOC102725191A0A1B0GVB3 256 aa14.87□□□□□ -0.03
TRIM28-215ENST00000601150 DEFB108AA8MXU0 73 aa14.87□□□□□ -0.03
TRIM28-215ENST00000601150 GMNNO75496 209 aa14.87□□□□□ -0.03
TRIM28-215ENST00000601150 IFNW1P05000 195 aa14.87□□□□□ -0.03
TRIM28-215ENST00000601150 THRBP10828 461 aa14.87□□□□□ -0.03
TRIM28-215ENST00000601150 IFNA8P32881 189 aa14.87□□□□□ -0.03
TRIM28-215ENST00000601150 RBM34P42696 430 aaKnown RBP14.87□□□□□ -0.03
TRIM28-215ENST00000601150 SLC25A3Q00325 362 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms