RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 ASPNQ9BXN1 380 aa12.81□□□□□ -0.36
VRK3-213ENST00000597215 YY1AP1Q9H869 796 aa12.81□□□□□ -0.36
VRK3-213ENST00000597215 FKRPQ9H9S5 495 aa12.81□□□□□ -0.36
VRK3-213ENST00000597215 MEPEQ9NQ76 525 aaPredicted RBP12.81□□□□□ -0.36
VRK3-213ENST00000597215 KLHL13Q9P2N7 655 aa12.81□□□□□ -0.36
VRK3-213ENST00000597215 CLEC4AQ9UMR7 237 aa12.81□□□□□ -0.36
VRK3-213ENST00000597215 EMC9Q9Y3B6 208 aa12.81□□□□□ -0.36
VRK3-213ENST00000597215 A0A087WUU8 490 aa12.8□□□□□ -0.36
VRK3-213ENST00000597215 ZNF814B7Z6K7 855 aa12.8□□□□□ -0.36
VRK3-213ENST00000597215 M0R082 166 aa12.8□□□□□ -0.36
VRK3-213ENST00000597215 KRT36O76013 467 aa12.8□□□□□ -0.36
VRK3-213ENST00000597215 VAMP5O95183 116 aa12.8□□□□□ -0.36
VRK3-213ENST00000597215 CH25HO95992 272 aa12.8□□□□□ -0.36
VRK3-213ENST00000597215 CBLP22681 906 aa12.8□□□□□ -0.36
VRK3-213ENST00000597215 GRPRP30550 384 aa12.8□□□□□ -0.36
VRK3-213ENST00000597215 ERFP50548 548 aa12.8□□□□□ -0.36
VRK3-213ENST00000597215 SLC16A1P53985 500 aa12.8□□□□□ -0.36
VRK3-213ENST00000597215 LTBQ06643 244 aa12.8□□□□□ -0.36
VRK3-213ENST00000597215 FOXF2Q12947 444 aa12.8□□□□□ -0.36
VRK3-213ENST00000597215 SLC25A35Q3KQZ1 300 aa12.8□□□□□ -0.36
VRK3-213ENST00000597215 TMEM225Q6GV28 225 aa12.8□□□□□ -0.36
VRK3-213ENST00000597215 MBOAT2Q6ZWT7 520 aa12.8□□□□□ -0.36
VRK3-213ENST00000597215 FAM214BQ7L5A3 538 aa12.8□□□□□ -0.36
VRK3-213ENST00000597215 CCDC103Q8IW40 242 aa12.8□□□□□ -0.36
VRK3-213ENST00000597215 CNEP1R1Q8N9A8 125 aa12.8□□□□□ -0.36
VRK3-213ENST00000597215 ADPRHL1Q8NDY3 354 aa12.8□□□□□ -0.36
VRK3-213ENST00000597215 ZNF417Q8TAU3 575 aa12.8□□□□□ -0.36
VRK3-213ENST00000597215 SLC7A13Q8TCU3 470 aa12.8□□□□□ -0.36
VRK3-213ENST00000597215 CA5BP1Q8WTZ4 195 aa12.8□□□□□ -0.36
VRK3-213ENST00000597215 SGTBQ96EQ0 304 aa12.8□□□□□ -0.36
VRK3-213ENST00000597215 MOGAT1Q96PD6 335 aa12.8□□□□□ -0.36
VRK3-213ENST00000597215 ZNF587Q96SQ5 575 aaPredicted RBP12.8□□□□□ -0.36
VRK3-213ENST00000597215 PSD2Q9BQI7 771 aa12.8□□□□□ -0.36
VRK3-213ENST00000597215 CHID1Q9BWS9 393 aa12.8□□□□□ -0.36
VRK3-213ENST00000597215 BCO1Q9HAY6 547 aa12.8□□□□□ -0.36
VRK3-213ENST00000597215 CHST11Q9NPF2 352 aa12.8□□□□□ -0.36
VRK3-213ENST00000597215 KRCC1Q9NPI7 259 aaPredicted RBP12.8□□□□□ -0.36
VRK3-213ENST00000597215 NANSQ9NR45 359 aa12.8□□□□□ -0.36
VRK3-213ENST00000597215 EMC3Q9P0I2 261 aa12.8□□□□□ -0.36
VRK3-213ENST00000597215 RASD1Q9Y272 281 aa12.8□□□□□ -0.36
VRK3-213ENST00000597215 B3GALT5Q9Y2C3 310 aa12.8□□□□□ -0.36
VRK3-213ENST00000597215 FLNCQ14315 2725 aa12.8□□□□□ -0.36
VRK3-213ENST00000597215 IGKV3D-15A0A087WSY6 115 aa12.79□□□□□ -0.36
VRK3-213ENST00000597215 ZNF716A6NP11 495 aa12.79□□□□□ -0.36
VRK3-213ENST00000597215 ZNF724A8MTY0 619 aa12.79□□□□□ -0.36
VRK3-213ENST00000597215 LRRN3E7EW58 273 aa12.79□□□□□ -0.36
VRK3-213ENST00000597215 GPR171O14626 319 aa12.79□□□□□ -0.36
VRK3-213ENST00000597215 PIP5K1CO60331 668 aa12.79□□□□□ -0.36
VRK3-213ENST00000597215 RAMP1O60894 148 aa12.79□□□□□ -0.36
VRK3-213ENST00000597215 FKBP6O75344 327 aa12.79□□□□□ -0.36
VRK3-213ENST00000597215 TNFSF13O75888 250 aa12.79□□□□□ -0.36
VRK3-213ENST00000597215 OR7A10O76100 309 aa12.79□□□□□ -0.36
VRK3-213ENST00000597215 HIST1H2ABP04908 130 aa12.79□□□□□ -0.36
VRK3-213ENST00000597215 YES1P07947 543 aa12.79□□□□□ -0.36
VRK3-213ENST00000597215 IFI30P13284 250 aa12.79□□□□□ -0.36
VRK3-213ENST00000597215 NQO1P15559 274 aaKnown RBP12.79□□□□□ -0.36
VRK3-213ENST00000597215 BMP5P22003 454 aa12.79□□□□□ -0.36
VRK3-213ENST00000597215 AGTR1P30556 359 aa12.79□□□□□ -0.36
VRK3-213ENST00000597215 KIR2DL2P43627 348 aaPredicted RBP12.79□□□□□ -0.36
VRK3-213ENST00000597215 P2RY4P51582 365 aa12.79□□□□□ -0.36
VRK3-213ENST00000597215 SIRPAP78324 504 aa12.79□□□□□ -0.36
VRK3-213ENST00000597215 PRKCDQ05655 676 aa12.79□□□□□ -0.36
VRK3-213ENST00000597215 PMS2P3Q13401 168 aa12.79□□□□□ -0.36
VRK3-213ENST00000597215 CCNIQ14094 377 aa12.79□□□□□ -0.36
VRK3-213ENST00000597215 TMEM201Q5SNT2 666 aa12.79□□□□□ -0.36
VRK3-213ENST00000597215 OR2T5Q6IEZ7 315 aa12.79□□□□□ -0.36
VRK3-213ENST00000597215 PODNL1Q6PEZ8 512 aa12.79□□□□□ -0.36
VRK3-213ENST00000597215 H1FNTQ75WM6 255 aaPredicted RBP12.79□□□□□ -0.36
VRK3-213ENST00000597215 HIST3H2AQ7L7L0 130 aa12.79□□□□□ -0.36
VRK3-213ENST00000597215 SLC46A3Q7Z3Q1 461 aa12.79□□□□□ -0.36
VRK3-213ENST00000597215 TUSC5Q8IXB3 177 aa12.79□□□□□ -0.36
VRK3-213ENST00000597215 NRMQ8IXM6 262 aa12.79□□□□□ -0.36
VRK3-213ENST00000597215 CDK20Q8IZL9 346 aa12.79□□□□□ -0.36
VRK3-213ENST00000597215 PAPD5Q8NDF8 572 aaKnown RBP12.79□□□□□ -0.36
VRK3-213ENST00000597215 OR6K3Q8NGY3 331 aa12.79□□□□□ -0.36
VRK3-213ENST00000597215 OR2T29Q8NH02 315 aa12.79□□□□□ -0.36
VRK3-213ENST00000597215 OR5J2Q8NH18 312 aa12.79□□□□□ -0.36
VRK3-213ENST00000597215 OR52J3Q8NH60 311 aa12.79□□□□□ -0.36
VRK3-213ENST00000597215 LILRB4Q8NHJ6 448 aa12.79□□□□□ -0.36
VRK3-213ENST00000597215 HIST1H2ACQ93077 130 aa12.79□□□□□ -0.36
VRK3-213ENST00000597215 BPIFA2Q96DR5 249 aa12.79□□□□□ -0.36
VRK3-213ENST00000597215 SF3B5Q9BWJ5 86 aaKnown RBP12.79□□□□□ -0.36
VRK3-213ENST00000597215 PIGMQ9H3S5 423 aa12.79□□□□□ -0.36
VRK3-213ENST00000597215 C20orf141Q9NUB4 165 aa12.79□□□□□ -0.36
VRK3-213ENST00000597215 CCM2LQ9NUG4 571 aaPredicted RBP12.79□□□□□ -0.36
VRK3-213ENST00000597215 MRPL39Q9NYK5 338 aaKnown RBP12.79□□□□□ -0.36
VRK3-213ENST00000597215 ZNF229Q9UJW7 825 aa12.79□□□□□ -0.36
VRK3-213ENST00000597215 ING1Q9UK53 422 aaPredicted RBP12.79□□□□□ -0.36
VRK3-213ENST00000597215 TMCC3Q9ULS5 477 aa12.79□□□□□ -0.36
VRK3-213ENST00000597215 TRBV4-1A0A0J9YWV2 114 aa12.78□□□□□ -0.36
VRK3-213ENST00000597215 FAM90A27PA6NNH2 459 aa12.78□□□□□ -0.36
VRK3-213ENST00000597215 TNFRSF11BO00300 401 aa12.78□□□□□ -0.36
VRK3-213ENST00000597215 CLDN14O95500 239 aa12.78□□□□□ -0.36
VRK3-213ENST00000597215 CST1P01037 141 aa12.78□□□□□ -0.36
VRK3-213ENST00000597215 ASAH2BP0C7U1 165 aa12.78□□□□□ -0.36
VRK3-213ENST00000597215 RNF224P0DH78 156 aa12.78□□□□□ -0.36
VRK3-213ENST00000597215 SLC17A1Q14916 467 aa12.78□□□□□ -0.36
VRK3-213ENST00000597215 POU4F3Q15319 338 aa12.78□□□□□ -0.36
VRK3-213ENST00000597215 VWA1Q6PCB0 445 aa12.78□□□□□ -0.36
VRK3-213ENST00000597215 TBPL2Q6SJ96 375 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms