RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 C6orf203Q9P0P8 240 aaPredicted RBP22.88■■□□□ 1.25
TRIM28-204ENST00000594806 A4GNTQ9UNA3 340 aa22.88■■□□□ 1.25
TRIM28-204ENST00000594806 ARPC2O15144 300 aa22.87■■□□□ 1.25
TRIM28-204ENST00000594806 RAMP1O60894 148 aa22.87■■□□□ 1.25
TRIM28-204ENST00000594806 BGLAPP02818 100 aa22.87■■□□□ 1.25
TRIM28-204ENST00000594806 KIR2DL3P43628 341 aa22.87■■□□□ 1.25
TRIM28-204ENST00000594806 DNAL1Q4LDG9 190 aa22.87■■□□□ 1.25
TRIM28-204ENST00000594806 MTX3Q5HYI7 312 aa22.87■■□□□ 1.25
TRIM28-204ENST00000594806 ZNF787Q6DD87 383 aa22.87■■□□□ 1.25
TRIM28-204ENST00000594806 WDR88Q6ZMY6 472 aa22.87■■□□□ 1.25
TRIM28-204ENST00000594806 H1FNTQ75WM6 255 aaPredicted RBP22.87■■□□□ 1.25
TRIM28-204ENST00000594806 CYP4Z1Q86W10 505 aa22.87■■□□□ 1.25
TRIM28-204ENST00000594806 TMEM45BQ96B21 275 aa22.87■■□□□ 1.25
TRIM28-204ENST00000594806 ASPNQ9BXN1 380 aa22.87■■□□□ 1.25
TRIM28-204ENST00000594806 KLHL4Q9C0H6 718 aa22.87■■□□□ 1.25
TRIM28-204ENST00000594806 ACTR3BQ9P1U1 418 aa22.87■■□□□ 1.25
TRIM28-204ENST00000594806 FLVCR1Q9Y5Y0 555 aa22.87■■□□□ 1.25
TRIM28-204ENST00000594806 LOC102725191A0A1B0GVB3 256 aa22.86■■□□□ 1.25
TRIM28-204ENST00000594806 TUBAL3A6NHL2 446 aa22.86■■□□□ 1.25
TRIM28-204ENST00000594806 MRPL33O75394 65 aaKnown RBP22.86■■□□□ 1.25
TRIM28-204ENST00000594806 GRPRP30550 384 aa22.86■■□□□ 1.25
TRIM28-204ENST00000594806 P3H2Q8IVL5 708 aa22.86■■□□□ 1.25
TRIM28-204ENST00000594806 ZNF100Q8IYN0 542 aa22.86■■□□□ 1.25
TRIM28-204ENST00000594806 OFCC1Q8IZS5 231 aa22.86■■□□□ 1.25
TRIM28-204ENST00000594806 OR9K2Q8NGE7 335 aa22.86■■□□□ 1.25
TRIM28-204ENST00000594806 FAM222BQ8WU58 562 aa22.86■■□□□ 1.25
TRIM28-204ENST00000594806 PYURFQ96I23 114 aa22.86■■□□□ 1.25
TRIM28-204ENST00000594806 FNDC11Q9BVV2 318 aa22.86■■□□□ 1.25
TRIM28-204ENST00000594806 OR10A4Q9H209 315 aa22.86■■□□□ 1.25
TRIM28-204ENST00000594806 MRPL39Q9NYK5 338 aaKnown RBP22.86■■□□□ 1.25
TRIM28-204ENST00000594806 NDRG3Q9UGV2 375 aa22.86■■□□□ 1.25
TRIM28-204ENST00000594806 ENPP4Q9Y6X5 453 aa22.86■■□□□ 1.25
TRIM28-204ENST00000594806 ANKHD1Q8IWZ3 2542 aaKnown RBP22.86■■□□□ 1.25
TRIM28-204ENST00000594806 C16orf97H3BN30 126 aa22.85■■□□□ 1.25
TRIM28-204ENST00000594806 MSX2P35548 267 aaPredicted RBP22.85■■□□□ 1.25
TRIM28-204ENST00000594806 FAM27E3Q08E93 113 aa22.85■■□□□ 1.25
TRIM28-204ENST00000594806 TRIM25Q14258 630 aaKnown RBP22.85■■□□□ 1.25
TRIM28-204ENST00000594806 GPAT4Q86UL3 456 aa22.85■■□□□ 1.25
TRIM28-204ENST00000594806 C10orf53Q8N6V4 93 aa22.85■■□□□ 1.25
TRIM28-204ENST00000594806 APH1AQ96BI3 265 aa22.85■■□□□ 1.25
TRIM28-204ENST00000594806 ZNF775Q96BV0 537 aaPredicted RBP22.85■■□□□ 1.25
TRIM28-204ENST00000594806 C14orf79Q96F83 325 aa22.85■■□□□ 1.25
TRIM28-204ENST00000594806 OXGR1Q96P68 337 aa22.85■■□□□ 1.25
TRIM28-204ENST00000594806 HDHD5Q9BXW7 423 aa22.85■■□□□ 1.25
TRIM28-204ENST00000594806 FKRPQ9H9S5 495 aa22.85■■□□□ 1.25
TRIM28-204ENST00000594806 FAM32AQ9Y421 112 aaKnown RBP22.85■■□□□ 1.25
TRIM28-204ENST00000594806 M0R082 166 aa22.84■■□□□ 1.25
TRIM28-204ENST00000594806 GYG2O15488 501 aa22.84■■□□□ 1.25
TRIM28-204ENST00000594806 ATP5HO75947 161 aa22.84■■□□□ 1.25
TRIM28-204ENST00000594806 ITGA2P17301 1181 aa22.84■■□□□ 1.25
TRIM28-204ENST00000594806 UGT2B10P36537 528 aa22.84■■□□□ 1.25
TRIM28-204ENST00000594806 P2RY6Q15077 328 aa22.84■■□□□ 1.25
TRIM28-204ENST00000594806 Q6ZT83 130 aa22.84■■□□□ 1.25
TRIM28-204ENST00000594806 NKAIN4Q8IVV8 208 aa22.84■■□□□ 1.25
TRIM28-204ENST00000594806 ZNF417Q8TAU3 575 aa22.84■■□□□ 1.25
TRIM28-204ENST00000594806 TMEM239Q8WW34 195 aa22.84■■□□□ 1.25
TRIM28-204ENST00000594806 DACH2Q96NX9 599 aa22.84■■□□□ 1.25
TRIM28-204ENST00000594806 ZNF587Q96SQ5 575 aaPredicted RBP22.84■■□□□ 1.25
TRIM28-204ENST00000594806 USB1Q9BQ65 265 aaKnown RBP22.84■■□□□ 1.25
TRIM28-204ENST00000594806 ANKRD19PQ9H560 264 aa22.84■■□□□ 1.25
TRIM28-204ENST00000594806 GPR52Q9Y2T5 361 aa22.84■■□□□ 1.25
TRIM28-204ENST00000594806 MED31Q9Y3C7 131 aa22.84■■□□□ 1.25
TRIM28-204ENST00000594806 ADGRG4Q8IZF6 3080 aa22.83■■□□□ 1.25
TRIM28-204ENST00000594806 MT-ND1P03886 318 aa22.83■■□□□ 1.25
TRIM28-204ENST00000594806 PPP3CBP16298 524 aa22.83■■□□□ 1.25
TRIM28-204ENST00000594806 ZNF43P17038 809 aa22.83■■□□□ 1.25
TRIM28-204ENST00000594806 RHCEP18577 417 aa22.83■■□□□ 1.25
TRIM28-204ENST00000594806 PSMB1P20618 241 aaKnown RBP22.83■■□□□ 1.25
TRIM28-204ENST00000594806 SSTR2P30874 369 aa22.83■■□□□ 1.25
TRIM28-204ENST00000594806 RASSF2P50749 326 aa22.83■■□□□ 1.25
TRIM28-204ENST00000594806 LTBQ06643 244 aa22.83■■□□□ 1.25
TRIM28-204ENST00000594806 BNIP1Q12981 228 aa22.83■■□□□ 1.25
TRIM28-204ENST00000594806 TRAM2Q15035 370 aa22.83■■□□□ 1.25
TRIM28-204ENST00000594806 ZNF74Q16587 644 aa22.83■■□□□ 1.25
TRIM28-204ENST00000594806 EXOC3L2Q2M3D2 409 aa22.83■■□□□ 1.25
TRIM28-204ENST00000594806 CREB3L2Q70SY1 520 aa22.83■■□□□ 1.25
TRIM28-204ENST00000594806 GABRG1Q8N1C3 465 aa22.83■■□□□ 1.25
TRIM28-204ENST00000594806 BTBD10Q9BSF8 475 aa22.83■■□□□ 1.25
TRIM28-204ENST00000594806 NANSQ9NR45 359 aa22.83■■□□□ 1.25
TRIM28-204ENST00000594806 ZNF229Q9UJW7 825 aa22.83■■□□□ 1.25
TRIM28-204ENST00000594806 GOSR1O95249 250 aa22.82■■□□□ 1.24
TRIM28-204ENST00000594806 STAMBPO95630 424 aa22.82■■□□□ 1.24
TRIM28-204ENST00000594806 NQO1P15559 274 aaKnown RBP22.82■■□□□ 1.24
TRIM28-204ENST00000594806 PMS2P3Q13401 168 aa22.82■■□□□ 1.24
TRIM28-204ENST00000594806 FBXW9Q5XUX1 488 aa22.82■■□□□ 1.24
TRIM28-204ENST00000594806 RNF113BQ8IZP6 322 aaKnown RBP22.82■■□□□ 1.24
TRIM28-204ENST00000594806 ZIC4Q8N9L1 334 aa22.82■■□□□ 1.24
TRIM28-204ENST00000594806 OR5J2Q8NH18 312 aa22.82■■□□□ 1.24
TRIM28-204ENST00000594806 TMEM255BQ8WV15 326 aa22.82■■□□□ 1.24
TRIM28-204ENST00000594806 MCUR1Q96AQ8 359 aa22.82■■□□□ 1.24
TRIM28-204ENST00000594806 ASB9Q96DX5 294 aa22.82■■□□□ 1.24
TRIM28-204ENST00000594806 C7orf34Q96L11 122 aa22.82■■□□□ 1.24
TRIM28-204ENST00000594806 MOGAT1Q96PD6 335 aa22.82■■□□□ 1.24
TRIM28-204ENST00000594806 THTPAQ9BU02 230 aa22.82■■□□□ 1.24
TRIM28-204ENST00000594806 CACNA1DQ01668 2161 aa22.82■■□□□ 1.24
TRIM28-204ENST00000594806 OR6C65A6NJZ3 312 aa22.81■■□□□ 1.24
TRIM28-204ENST00000594806 FFAR1O14842 300 aa22.81■■□□□ 1.24
TRIM28-204ENST00000594806 CH25HO95992 272 aa22.81■■□□□ 1.24
TRIM28-204ENST00000594806 EPXP11678 715 aa22.81■■□□□ 1.24
TRIM28-204ENST00000594806 YAP1P46937 504 aaKnown RBP22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms