RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 A0A1W2PR80 420 aa17.71■□□□□ 0.43
CIRBP-239ENST00000592467 CIB4A0PJX0 185 aa17.71■□□□□ 0.43
CIRBP-239ENST00000592467 M0QX08 132 aa17.71■□□□□ 0.43
CIRBP-239ENST00000592467 OVOL3O00110 214 aa17.71■□□□□ 0.43
CIRBP-239ENST00000592467 CLOCKO15516 846 aa17.71■□□□□ 0.43
CIRBP-239ENST00000592467 SERPINB7O75635 380 aa17.71■□□□□ 0.43
CIRBP-239ENST00000592467 VAMP5O95183 116 aa17.71■□□□□ 0.43
CIRBP-239ENST00000592467 LGI1O95970 557 aa17.71■□□□□ 0.43
CIRBP-239ENST00000592467 SOD3P08294 240 aa17.71■□□□□ 0.43
CIRBP-239ENST00000592467 SELENOPP49908 381 aa17.71■□□□□ 0.43
CIRBP-239ENST00000592467 ARFIP2P53365 341 aa17.71■□□□□ 0.43
CIRBP-239ENST00000592467 RIPPLY3P57055 190 aa17.71■□□□□ 0.43
CIRBP-239ENST00000592467 GUCY1A3Q02108 690 aa17.71■□□□□ 0.43
CIRBP-239ENST00000592467 LTBQ06643 244 aa17.71■□□□□ 0.43
CIRBP-239ENST00000592467 LGALS3BPQ08380 585 aa17.71■□□□□ 0.43
CIRBP-239ENST00000592467 SF3A3Q12874 501 aaKnown RBP eCLIP17.71■□□□□ 0.43
CIRBP-239ENST00000592467 KLF10Q13118 480 aa17.71■□□□□ 0.43
CIRBP-239ENST00000592467 OR1Q1Q15612 314 aa17.71■□□□□ 0.43
CIRBP-239ENST00000592467 NRF1Q16656 503 aa17.71■□□□□ 0.43
CIRBP-239ENST00000592467 CYP51A1Q16850 503 aa17.71■□□□□ 0.43
CIRBP-239ENST00000592467 TRMT5Q32P41 509 aaKnown RBP17.71■□□□□ 0.43
CIRBP-239ENST00000592467 ALG10BQ5I7T1 473 aa17.71■□□□□ 0.43
CIRBP-239ENST00000592467 C9orf135Q5VTT2 229 aa17.71■□□□□ 0.43
CIRBP-239ENST00000592467 TMEM225Q6GV28 225 aa17.71■□□□□ 0.43
CIRBP-239ENST00000592467 NANOGP8Q6NSW7 305 aa17.71■□□□□ 0.43
CIRBP-239ENST00000592467 ULK3Q6PHR2 472 aa17.71■□□□□ 0.43
CIRBP-239ENST00000592467 LINGO2Q7L985 606 aa17.71■□□□□ 0.43
CIRBP-239ENST00000592467 SSX8Q7RTT4 187 aa17.71■□□□□ 0.43
CIRBP-239ENST00000592467 AAED1Q7RTV5 226 aa17.71■□□□□ 0.43
CIRBP-239ENST00000592467 GPAT4Q86UL3 456 aa17.71■□□□□ 0.43
CIRBP-239ENST00000592467 KDM8Q8N371 416 aa17.71■□□□□ 0.43
CIRBP-239ENST00000592467 SMYD1Q8NB12 490 aa17.71■□□□□ 0.43
CIRBP-239ENST00000592467 C1orf162Q8NEQ5 155 aaPredicted RBP17.71■□□□□ 0.43
CIRBP-239ENST00000592467 BHLHE22Q8NFJ8 381 aaPredicted RBP17.71■□□□□ 0.43
CIRBP-239ENST00000592467 OR4D11Q8NGI4 311 aa17.71■□□□□ 0.43
CIRBP-239ENST00000592467 OR52N5Q8NH56 324 aa17.71■□□□□ 0.43
CIRBP-239ENST00000592467 OR10A6Q8NH74 314 aa17.71■□□□□ 0.43
CIRBP-239ENST00000592467 DNAJA4Q8WW22 397 aaPredicted RBP17.71■□□□□ 0.43
CIRBP-239ENST00000592467 MUCL1Q96DR8 90 aa17.71■□□□□ 0.43
CIRBP-239ENST00000592467 PERPQ96FX8 193 aa17.71■□□□□ 0.43
CIRBP-239ENST00000592467 SLCO5A1Q9H2Y9 848 aa17.71■□□□□ 0.43
CIRBP-239ENST00000592467 NANOGQ9H9S0 305 aa17.71■□□□□ 0.43
CIRBP-239ENST00000592467 KLHL14Q9P2G3 628 aa17.71■□□□□ 0.43
CIRBP-239ENST00000592467 RPS6KB2Q9UBS0 482 aa17.71■□□□□ 0.43
CIRBP-239ENST00000592467 RASD1Q9Y272 281 aa17.71■□□□□ 0.43
CIRBP-239ENST00000592467 A0A087WUJ7 227 aa17.7■□□□□ 0.42
CIRBP-239ENST00000592467 CCT8L1PA6NM43 557 aa17.7■□□□□ 0.42
CIRBP-239ENST00000592467 TMCC2O75069 709 aa17.7■□□□□ 0.42
CIRBP-239ENST00000592467 LYPD3O95274 346 aa17.7■□□□□ 0.42
CIRBP-239ENST00000592467 OPN1SWP03999 348 aa17.7■□□□□ 0.42
CIRBP-239ENST00000592467 TROVE2P10155 538 aaKnown RBP eCLIP17.7■□□□□ 0.42
CIRBP-239ENST00000592467 CD247P20963 164 aa17.7■□□□□ 0.42
CIRBP-239ENST00000592467 PCGF2P35227 344 aa17.7■□□□□ 0.42
CIRBP-239ENST00000592467 RGS8P57771 180 aaPredicted RBP17.7■□□□□ 0.42
CIRBP-239ENST00000592467 PGGHGQ32M88 737 aa17.7■□□□□ 0.42
CIRBP-239ENST00000592467 OR7E24Q6IFN5 339 aa17.7■□□□□ 0.42
CIRBP-239ENST00000592467 LINC00114Q6XXX2 140 aa17.7■□□□□ 0.42
CIRBP-239ENST00000592467 TSPYL5Q86VY4 417 aaPredicted RBP17.7■□□□□ 0.42
CIRBP-239ENST00000592467 CALHM3Q86XJ0 350 aa17.7■□□□□ 0.42
CIRBP-239ENST00000592467 P3H2Q8IVL5 708 aa17.7■□□□□ 0.42
CIRBP-239ENST00000592467 TAMM41Q96BW9 452 aa17.7■□□□□ 0.42
CIRBP-239ENST00000592467 SLC25A36Q96CQ1 311 aa17.7■□□□□ 0.42
CIRBP-239ENST00000592467 EVA1AQ9H8M9 152 aa17.7■□□□□ 0.42
CIRBP-239ENST00000592467 SLC17A5Q9NRA2 495 aa17.7■□□□□ 0.42
CIRBP-239ENST00000592467 UPB1Q9UBR1 384 aa17.7■□□□□ 0.42
CIRBP-239ENST00000592467 M0R3H8 397 aa17.69■□□□□ 0.42
CIRBP-239ENST00000592467 ZNF432O94892 652 aa17.69■□□□□ 0.42
CIRBP-239ENST00000592467 THY1P04216 161 aa17.69■□□□□ 0.42
CIRBP-239ENST00000592467 C8BP07358 591 aa17.69■□□□□ 0.42
CIRBP-239ENST00000592467 MPGP29372 298 aa17.69■□□□□ 0.42
CIRBP-239ENST00000592467 SPOCK1Q08629 439 aa17.69■□□□□ 0.42
CIRBP-239ENST00000592467 RABL3Q5HYI8 236 aa17.69■□□□□ 0.42
CIRBP-239ENST00000592467 COQ5Q5HYK3 327 aa17.69■□□□□ 0.42
CIRBP-239ENST00000592467 FAM69AQ5T7M9 428 aa17.69■□□□□ 0.42
CIRBP-239ENST00000592467 C5orf46Q6UWT4 87 aa17.69■□□□□ 0.42
CIRBP-239ENST00000592467 NHLRC1Q6VVB1 395 aa17.69■□□□□ 0.42
CIRBP-239ENST00000592467 CIARTQ8N365 385 aaPredicted RBP17.69■□□□□ 0.42
CIRBP-239ENST00000592467 C17orf78Q8N4C9 275 aa17.69■□□□□ 0.42
CIRBP-239ENST00000592467 POMGNT2Q8NAT1 580 aa17.69■□□□□ 0.42
CIRBP-239ENST00000592467 OR6T1Q8NGN1 323 aa17.69■□□□□ 0.42
CIRBP-239ENST00000592467 TMEM171Q8WVE6 324 aa17.69■□□□□ 0.42
CIRBP-239ENST00000592467 FBXW5Q969U6 566 aa17.69■□□□□ 0.42
CIRBP-239ENST00000592467 SLC47A1Q96FL8 570 aa17.69■□□□□ 0.42
CIRBP-239ENST00000592467 SLC41A3Q96GZ6 507 aa17.69■□□□□ 0.42
CIRBP-239ENST00000592467 LAMP3Q9UQV4 416 aa17.69■□□□□ 0.42
CIRBP-239ENST00000592467 PLCE1Q9P212 2302 aa17.69■□□□□ 0.42
CIRBP-239ENST00000592467 TRAV36DV7A0A075B6V5 113 aa17.68■□□□□ 0.42
CIRBP-239ENST00000592467 M0R082 166 aa17.68■□□□□ 0.42
CIRBP-239ENST00000592467 ABCD4O14678 606 aa17.68■□□□□ 0.42
CIRBP-239ENST00000592467 ARHGEF9O43307 516 aa17.68■□□□□ 0.42
CIRBP-239ENST00000592467 OR2T1O43869 369 aa17.68■□□□□ 0.42
CIRBP-239ENST00000592467 FMO6PO60774 539 aa17.68■□□□□ 0.42
CIRBP-239ENST00000592467 UPK3AO75631 287 aa17.68■□□□□ 0.42
CIRBP-239ENST00000592467 CD8AP01732 235 aa17.68■□□□□ 0.42
CIRBP-239ENST00000592467 BGLAPP02818 100 aa17.68■□□□□ 0.42
CIRBP-239ENST00000592467 VIMP08670 466 aaKnown RBP17.68■□□□□ 0.42
CIRBP-239ENST00000592467 GRPRP30550 384 aa17.68■□□□□ 0.42
CIRBP-239ENST00000592467 CDH12P55289 794 aa17.68■□□□□ 0.42
CIRBP-239ENST00000592467 VMACQ2NL98 169 aa17.68■□□□□ 0.42
CIRBP-239ENST00000592467 REP15Q6BDI9 236 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 142.7 ms