RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 CXCL13O43927 109 aa15.2■□□□□ 0.02
SCAMP4-211ENST00000588907 SLC19A2O60779 497 aa15.2■□□□□ 0.02
SCAMP4-211ENST00000588907 RCBTB2O95199 551 aa15.2■□□□□ 0.02
SCAMP4-211ENST00000588907 GASTP01350 101 aa15.2■□□□□ 0.02
SCAMP4-211ENST00000588907 OPN1LWP04000 364 aa15.2■□□□□ 0.02
SCAMP4-211ENST00000588907 TPOP07202 933 aa15.2■□□□□ 0.02
SCAMP4-211ENST00000588907 MAKP20794 623 aa15.2■□□□□ 0.02
SCAMP4-211ENST00000588907 PTNP21246 168 aa15.2■□□□□ 0.02
SCAMP4-211ENST00000588907 GRPRP30550 384 aa15.2■□□□□ 0.02
SCAMP4-211ENST00000588907 ALDH3A2P51648 485 aa15.2■□□□□ 0.02
SCAMP4-211ENST00000588907 RPS4XP62701 263 aaKnown RBP15.2■□□□□ 0.02
SCAMP4-211ENST00000588907 PMS2P3Q13401 168 aa15.2■□□□□ 0.02
SCAMP4-211ENST00000588907 LAPTM4AQ15012 233 aa15.2■□□□□ 0.02
SCAMP4-211ENST00000588907 RNPS1Q15287 305 aaKnown RBP15.2■□□□□ 0.02
SCAMP4-211ENST00000588907 ZBED5Q49AG3 693 aa15.2■□□□□ 0.02
SCAMP4-211ENST00000588907 GXYLT1Q4G148 440 aa15.2■□□□□ 0.02
SCAMP4-211ENST00000588907 OTUD3Q5T2D3 398 aaPredicted RBP15.2■□□□□ 0.02
SCAMP4-211ENST00000588907 C1QL3Q5VWW1 255 aa15.2■□□□□ 0.02
SCAMP4-211ENST00000588907 ZBTB49Q6ZSB9 765 aa15.2■□□□□ 0.02
SCAMP4-211ENST00000588907 PARP8Q8N3A8 854 aa15.2■□□□□ 0.02
SCAMP4-211ENST00000588907 TACO1Q9BSH4 297 aaKnown RBP15.2■□□□□ 0.02
SCAMP4-211ENST00000588907 UCK2Q9BZX2 261 aa15.2■□□□□ 0.02
SCAMP4-211ENST00000588907 GP6Q9HCN6 339 aa15.2■□□□□ 0.02
SCAMP4-211ENST00000588907 RASD1Q9Y272 281 aa15.2■□□□□ 0.02
SCAMP4-211ENST00000588907 HIF3AQ9Y2N7 669 aa15.2■□□□□ 0.02
SCAMP4-211ENST00000588907 LOC102725191A0A1B0GVB3 256 aa15.19■□□□□ 0.02
SCAMP4-211ENST00000588907 CD8B2A6NJW9 211 aa15.19■□□□□ 0.02
SCAMP4-211ENST00000588907 SLC22A20A6NK97 555 aa15.19■□□□□ 0.02
SCAMP4-211ENST00000588907 CLCA1A8K7I4 914 aa15.19■□□□□ 0.02
SCAMP4-211ENST00000588907 B8ZZF3 427 aa15.19■□□□□ 0.02
SCAMP4-211ENST00000588907 H0YC42 278 aa15.19■□□□□ 0.02
SCAMP4-211ENST00000588907 M0R082 166 aa15.19■□□□□ 0.02
SCAMP4-211ENST00000588907 IGFBP5P24593 272 aa15.19■□□□□ 0.02
SCAMP4-211ENST00000588907 TPD52P55327 224 aaPredicted RBP15.19■□□□□ 0.02
SCAMP4-211ENST00000588907 PPP2R2BQ00005 443 aa15.19■□□□□ 0.02
SCAMP4-211ENST00000588907 PUDPQ08623 228 aa15.19■□□□□ 0.02
SCAMP4-211ENST00000588907 DAG1Q14118 895 aa15.19■□□□□ 0.02
SCAMP4-211ENST00000588907 PDK3Q15120 406 aa15.19■□□□□ 0.02
SCAMP4-211ENST00000588907 EIF2S3LQ2VIR3 472 aaKnown RBP15.19■□□□□ 0.02
SCAMP4-211ENST00000588907 OGFRL1Q5TC84 451 aaPredicted RBP15.19■□□□□ 0.02
SCAMP4-211ENST00000588907 KDM4DQ6B0I6 523 aa15.19■□□□□ 0.02
SCAMP4-211ENST00000588907 RASSF6Q6ZTQ3 369 aa15.19■□□□□ 0.02
SCAMP4-211ENST00000588907 FGD2Q7Z6J4 655 aa15.19■□□□□ 0.02
SCAMP4-211ENST00000588907 ADGRE4PQ86SQ3 457 aa15.19■□□□□ 0.02
SCAMP4-211ENST00000588907 CD163Q86VB7 1156 aa15.19■□□□□ 0.02
SCAMP4-211ENST00000588907 EPHX4Q8IUS5 362 aa15.19■□□□□ 0.02
SCAMP4-211ENST00000588907 HS3ST5Q8IZT8 346 aa15.19■□□□□ 0.02
SCAMP4-211ENST00000588907 ZNF417Q8TAU3 575 aa15.19■□□□□ 0.02
SCAMP4-211ENST00000588907 RDH12Q96NR8 316 aa15.19■□□□□ 0.02
SCAMP4-211ENST00000588907 ZNF587Q96SQ5 575 aaPredicted RBP15.19■□□□□ 0.02
SCAMP4-211ENST00000588907 TUBA1CQ9BQE3 449 aa15.19■□□□□ 0.02
SCAMP4-211ENST00000588907 SF3B5Q9BWJ5 86 aaKnown RBP15.19■□□□□ 0.02
SCAMP4-211ENST00000588907 PRRG4Q9BZD6 226 aa15.19■□□□□ 0.02
SCAMP4-211ENST00000588907 FANCFQ9NPI8 374 aa15.19■□□□□ 0.02
SCAMP4-211ENST00000588907 PAPOLBQ9NRJ5 636 aaKnown RBP15.19■□□□□ 0.02
SCAMP4-211ENST00000588907 GLRX2Q9NS18 164 aa15.19■□□□□ 0.02
SCAMP4-211ENST00000588907 KRT84Q9NSB2 600 aa15.19■□□□□ 0.02
SCAMP4-211ENST00000588907 KLHL9Q9P2J3 617 aa15.19■□□□□ 0.02
SCAMP4-211ENST00000588907 TNFRSF10DQ9UBN6 386 aa15.19■□□□□ 0.02
SCAMP4-211ENST00000588907 CDC42EP2O14613 210 aa15.18■□□□□ 0.02
SCAMP4-211ENST00000588907 ALPLP05186 524 aa15.18■□□□□ 0.02
SCAMP4-211ENST00000588907 TSPAN19P0C672 248 aa15.18■□□□□ 0.02
SCAMP4-211ENST00000588907 ACVR2AP27037 513 aa15.18■□□□□ 0.02
SCAMP4-211ENST00000588907 RAD23AP54725 363 aa15.18■□□□□ 0.02
SCAMP4-211ENST00000588907 LSM11P83369 360 aaKnown RBP eCLIP15.18■□□□□ 0.02
SCAMP4-211ENST00000588907 C19orf57Q0VDD7 668 aa15.18■□□□□ 0.02
SCAMP4-211ENST00000588907 GTF3C1Q12789 2109 aa15.18■□□□□ 0.02
SCAMP4-211ENST00000588907 ZP4Q12836 540 aa15.18■□□□□ 0.02
SCAMP4-211ENST00000588907 PON3Q15166 354 aa15.18■□□□□ 0.02
SCAMP4-211ENST00000588907 POU4F3Q15319 338 aa15.18■□□□□ 0.02
SCAMP4-211ENST00000588907 ACSF3Q4G176 576 aaPredicted RBP15.18■□□□□ 0.02
SCAMP4-211ENST00000588907 NSUN5P2Q63ZY6 315 aa15.18■□□□□ 0.02
SCAMP4-211ENST00000588907 ABLIM2Q6H8Q1 611 aa15.18■□□□□ 0.02
SCAMP4-211ENST00000588907 OR2A2Q6IF42 318 aa15.18■□□□□ 0.02
SCAMP4-211ENST00000588907 ZNF585AQ6P3V2 769 aa15.18■□□□□ 0.02
SCAMP4-211ENST00000588907 ZNF620Q6ZNG0 422 aa15.18■□□□□ 0.02
SCAMP4-211ENST00000588907 FCRLAQ7L513 359 aa15.18■□□□□ 0.02
SCAMP4-211ENST00000588907 P4HA3Q7Z4N8 544 aa15.18■□□□□ 0.02
SCAMP4-211ENST00000588907 ATCAYQ86WG3 371 aa15.18■□□□□ 0.02
SCAMP4-211ENST00000588907 CBR4Q8N4T8 237 aa15.18■□□□□ 0.02
SCAMP4-211ENST00000588907 GALNT11Q8NCW6 608 aa15.18■□□□□ 0.02
SCAMP4-211ENST00000588907 ANKK1Q8NFD2 765 aa15.18■□□□□ 0.02
SCAMP4-211ENST00000588907 OR52L1Q8NGH7 329 aa15.18■□□□□ 0.02
SCAMP4-211ENST00000588907 FANK1Q8TC84 345 aa15.18■□□□□ 0.02
SCAMP4-211ENST00000588907 RNF128Q8TEB7 428 aa15.18■□□□□ 0.02
SCAMP4-211ENST00000588907 WNT2BQ93097 391 aa15.18■□□□□ 0.02
SCAMP4-211ENST00000588907 GTPBP3Q969Y2 492 aaKnown RBP15.18■□□□□ 0.02
SCAMP4-211ENST00000588907 ZFP3Q96NJ6 502 aa15.18■□□□□ 0.02
SCAMP4-211ENST00000588907 TM9SF2Q99805 663 aa15.18■□□□□ 0.02
SCAMP4-211ENST00000588907 SRXN1Q9BYN0 137 aa15.18■□□□□ 0.02
SCAMP4-211ENST00000588907 PNPLA3Q9NST1 481 aa15.18■□□□□ 0.02
SCAMP4-211ENST00000588907 EMC3Q9P0I2 261 aa15.18■□□□□ 0.02
SCAMP4-211ENST00000588907 CLCF1Q9UBD9 225 aa15.18■□□□□ 0.02
SCAMP4-211ENST00000588907 NKX1-2Q9UD57 310 aaPredicted RBP15.18■□□□□ 0.02
SCAMP4-211ENST00000588907 SIGLEC7Q9Y286 467 aa15.18■□□□□ 0.02
SCAMP4-211ENST00000588907 CDH10Q9Y6N8 788 aa15.18■□□□□ 0.02
SCAMP4-211ENST00000588907 KIAA1549Q9HCM3 1950 aa15.18■□□□□ 0.02
SCAMP4-211ENST00000588907 NPIPB13A6NJU9 1138 aa15.17■□□□□ 0.02
SCAMP4-211ENST00000588907 NPIPB4C9JG80 1138 aa15.17■□□□□ 0.02
SCAMP4-211ENST00000588907 PDLIM1O00151 329 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms