RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 PPP4R1LQ9P1A2 415 aa20.2■□□□□ 0.82
CIRBP-208ENST00000586548 DMDP11532 3685 aa20.2■□□□□ 0.82
CIRBP-208ENST00000586548 WDR87Q6ZQQ6 2873 aa20.2■□□□□ 0.82
CIRBP-208ENST00000586548 TEX13CA0A0J9YWL9 993 aa20.19■□□□□ 0.82
CIRBP-208ENST00000586548 C2orf72A6NCS6 295 aa20.19■□□□□ 0.82
CIRBP-208ENST00000586548 WISP1O95388 367 aa20.19■□□□□ 0.82
CIRBP-208ENST00000586548 DLGAP3O95886 979 aa20.19■□□□□ 0.82
CIRBP-208ENST00000586548 PRKCAP17252 672 aa20.19■□□□□ 0.82
CIRBP-208ENST00000586548 PTGDSP41222 190 aa20.19■□□□□ 0.82
CIRBP-208ENST00000586548 IL10RAQ13651 578 aa20.19■□□□□ 0.82
CIRBP-208ENST00000586548 EMC4Q5J8M3 183 aa20.19■□□□□ 0.82
CIRBP-208ENST00000586548 C1orf140Q5VVS0 124 aa20.19■□□□□ 0.82
CIRBP-208ENST00000586548 OR5M10Q6IEU7 315 aa20.19■□□□□ 0.82
CIRBP-208ENST00000586548 POMGNT2Q8NAT1 580 aa20.19■□□□□ 0.82
CIRBP-208ENST00000586548 SMPDL3BQ92485 455 aa20.19■□□□□ 0.82
CIRBP-208ENST00000586548 Q96M85 177 aa20.19■□□□□ 0.82
CIRBP-208ENST00000586548 ASPNQ9BXN1 380 aa20.19■□□□□ 0.82
CIRBP-208ENST00000586548 NXF2Q9GZY0 626 aaKnown RBP20.19■□□□□ 0.82
CIRBP-208ENST00000586548 METTL7AQ9H8H3 244 aa20.19■□□□□ 0.82
CIRBP-208ENST00000586548 PISDQ9UG56 409 aa20.19■□□□□ 0.82
CIRBP-208ENST00000586548 SF3B6Q9Y3B4 125 aaKnown RBP20.19■□□□□ 0.82
CIRBP-208ENST00000586548 WIF1Q9Y5W5 379 aa20.19■□□□□ 0.82
CIRBP-208ENST00000586548 TNFSF12-TNFSF13A0A0A6YY99 330 aa20.19■□□□□ 0.82
CIRBP-208ENST00000586548 ZNF670-ZNF695F2Z2N8 137 aa20.19■□□□□ 0.82
CIRBP-208ENST00000586548 LALBAP00709 142 aa20.19■□□□□ 0.82
CIRBP-208ENST00000586548 MRPL3P09001 348 aaKnown RBP20.19■□□□□ 0.82
CIRBP-208ENST00000586548 JMJD7P0C870 316 aa20.19■□□□□ 0.82
CIRBP-208ENST00000586548 GABRA5P31644 462 aa20.19■□□□□ 0.82
CIRBP-208ENST00000586548 C1QL3Q5VWW1 255 aa20.19■□□□□ 0.82
CIRBP-208ENST00000586548 BICRALQ6AI39 1079 aa20.19■□□□□ 0.82
CIRBP-208ENST00000586548 NDUFAF7Q7L592 441 aa20.19■□□□□ 0.82
CIRBP-208ENST00000586548 JAZF1Q86VZ6 243 aa20.19■□□□□ 0.82
CIRBP-208ENST00000586548 LSM14AQ8ND56 463 aaKnown RBP20.19■□□□□ 0.82
CIRBP-208ENST00000586548 OR11G2Q8NGC1 345 aa20.19■□□□□ 0.82
CIRBP-208ENST00000586548 SIAEQ9HAT2 523 aa20.19■□□□□ 0.82
CIRBP-208ENST00000586548 HMG20AQ9NP66 347 aa20.19■□□□□ 0.82
CIRBP-208ENST00000586548 AKIP1Q9NQ31 210 aa20.19■□□□□ 0.82
CIRBP-208ENST00000586548 MED11Q9P086 117 aa20.19■□□□□ 0.82
CIRBP-208ENST00000586548 OR6C68A6NDL8 312 aa20.18■□□□□ 0.82
CIRBP-208ENST00000586548 B4DXG7 233 aa20.18■□□□□ 0.82
CIRBP-208ENST00000586548 CLDN25C9JDP6 229 aa20.18■□□□□ 0.82
CIRBP-208ENST00000586548 ETV2O00321 342 aaPredicted RBP20.18■□□□□ 0.82
CIRBP-208ENST00000586548 SLC30A4O14863 429 aa20.18■□□□□ 0.82
CIRBP-208ENST00000586548 ITGA10O75578 1167 aa20.18■□□□□ 0.82
CIRBP-208ENST00000586548 RAB40ALP0C0E4 278 aa20.18■□□□□ 0.82
CIRBP-208ENST00000586548 APOBEC1P41238 236 aaKnown RBP20.18■□□□□ 0.82
CIRBP-208ENST00000586548 DIO1P49895 249 aa20.18■□□□□ 0.82
CIRBP-208ENST00000586548 NUBP1P53384 320 aa20.18■□□□□ 0.82
CIRBP-208ENST00000586548 DBPQ10586 325 aaPredicted RBP20.18■□□□□ 0.82
CIRBP-208ENST00000586548 PON3Q15166 354 aa20.18■□□□□ 0.82
CIRBP-208ENST00000586548 SGCBQ16585 318 aa20.18■□□□□ 0.82
CIRBP-208ENST00000586548 GPR139Q6DWJ6 353 aa20.18■□□□□ 0.82
CIRBP-208ENST00000586548 OR6S1Q8NH40 331 aa20.18■□□□□ 0.82
CIRBP-208ENST00000586548 ZMYND19Q96E35 227 aaPredicted RBP20.18■□□□□ 0.82
CIRBP-208ENST00000586548 TRMT61AQ96FX7 289 aaKnown RBP20.18■□□□□ 0.82
CIRBP-208ENST00000586548 CNN2Q99439 309 aaKnown RBP20.18■□□□□ 0.82
CIRBP-208ENST00000586548 TBX5Q99593 518 aa20.18■□□□□ 0.82
CIRBP-208ENST00000586548 WDR12Q9GZL7 423 aaKnown RBP20.18■□□□□ 0.82
CIRBP-208ENST00000586548 NSG1A0A0A6YYJ2 146 aa20.17■□□□□ 0.82
CIRBP-208ENST00000586548 TP53I11O14683 189 aa20.17■□□□□ 0.82
CIRBP-208ENST00000586548 AHSA1O95433 338 aa20.17■□□□□ 0.82
CIRBP-208ENST00000586548 F13BP05160 661 aa20.17■□□□□ 0.82
CIRBP-208ENST00000586548 CELA2AP08217 269 aa20.17■□□□□ 0.82
CIRBP-208ENST00000586548 SPI1P17947 270 aa20.17■□□□□ 0.82
CIRBP-208ENST00000586548 SOX6P35712 828 aa20.17■□□□□ 0.82
CIRBP-208ENST00000586548 SLC25A1P53007 311 aa20.17■□□□□ 0.82
CIRBP-208ENST00000586548 RPS25P62851 125 aaKnown RBP20.17■□□□□ 0.82
CIRBP-208ENST00000586548 ZNF846Q147U1 533 aa20.17■□□□□ 0.82
CIRBP-208ENST00000586548 LEG1Q6P5S2 330 aa20.17■□□□□ 0.82
CIRBP-208ENST00000586548 OR5J2Q8NH18 312 aa20.17■□□□□ 0.82
CIRBP-208ENST00000586548 TIMP4Q99727 224 aa20.17■□□□□ 0.82
CIRBP-208ENST00000586548 CDADC1Q9BWV3 514 aa20.17■□□□□ 0.82
CIRBP-208ENST00000586548 ASB6Q9NWX5 421 aa20.17■□□□□ 0.82
CIRBP-208ENST00000586548 GRHPRQ9UBQ7 328 aa20.17■□□□□ 0.82
CIRBP-208ENST00000586548 WDFY4Q6ZS81 3184 aa20.17■□□□□ 0.82
CIRBP-208ENST00000586548 CPAMD8Q8IZJ3 1885 aa20.16■□□□□ 0.82
CIRBP-208ENST00000586548 PNMA8CA0A1B0GUJ8 204 aa20.16■□□□□ 0.82
CIRBP-208ENST00000586548 PMS2P1A4D2B8 440 aa20.16■□□□□ 0.82
CIRBP-208ENST00000586548 OR2T1O43869 369 aa20.16■□□□□ 0.82
CIRBP-208ENST00000586548 CDKN2AP42771 156 aaKnown RBP20.16■□□□□ 0.82
CIRBP-208ENST00000586548 CAPZA2P47755 286 aa20.16■□□□□ 0.82
CIRBP-208ENST00000586548 OPN5Q6U736 354 aa20.16■□□□□ 0.82
CIRBP-208ENST00000586548 KLBQ86Z14 1044 aa20.16■□□□□ 0.82
CIRBP-208ENST00000586548 ATP6V1C2Q8NEY4 427 aa20.16■□□□□ 0.82
CIRBP-208ENST00000586548 ZPLD1Q8TCW7 415 aa20.16■□□□□ 0.82
CIRBP-208ENST00000586548 TSPAN32Q96QS1 320 aa20.16■□□□□ 0.82
CIRBP-208ENST00000586548 ISG20L2Q9H9L3 353 aaKnown RBP20.16■□□□□ 0.82
CIRBP-208ENST00000586548 CPNE5Q9HCH3 593 aa20.16■□□□□ 0.82
CIRBP-208ENST00000586548 PALMDQ9NP74 551 aa20.16■□□□□ 0.82
CIRBP-208ENST00000586548 TXNL4BQ9NX01 149 aaKnown RBP20.16■□□□□ 0.82
CIRBP-208ENST00000586548 TOR4AQ9NXH8 423 aa20.16■□□□□ 0.82
CIRBP-208ENST00000586548 BABAM2Q9NXR7 383 aa20.16■□□□□ 0.82
CIRBP-208ENST00000586548 YARS2Q9Y2Z4 477 aaKnown RBP20.16■□□□□ 0.82
CIRBP-208ENST00000586548 PCDHGB7Q9Y5F8 929 aa20.16■□□□□ 0.82
CIRBP-208ENST00000586548 NOX1Q9Y5S8 564 aa20.16■□□□□ 0.82
CIRBP-208ENST00000586548 MT-ND5P03915 603 aa20.16■□□□□ 0.82
CIRBP-208ENST00000586548 CASP3P42574 277 aa20.16■□□□□ 0.82
CIRBP-208ENST00000586548 CLDN6P56747 220 aa20.16■□□□□ 0.82
CIRBP-208ENST00000586548 ZNF85Q03923 595 aa20.16■□□□□ 0.82
CIRBP-208ENST00000586548 GPR50Q13585 617 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms