RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 ZNF621Q6ZSS3 439 aa12.56□□□□□ -0.4
SDF2-202ENST00000585428 SLC46A3Q7Z3Q1 461 aa12.56□□□□□ -0.4
SDF2-202ENST00000585428 SPATA19Q7Z5L4 167 aa12.56□□□□□ -0.4
SDF2-202ENST00000585428 GPAT4Q86UL3 456 aa12.56□□□□□ -0.4
SDF2-202ENST00000585428 ZNF440Q8IYI8 595 aa12.56□□□□□ -0.4
SDF2-202ENST00000585428 NUP37Q8NFH4 326 aa12.56□□□□□ -0.4
SDF2-202ENST00000585428 WDR60Q8WVS4 1066 aa12.56□□□□□ -0.4
SDF2-202ENST00000585428 LINC00470Q9BZP3 86 aa12.56□□□□□ -0.4
SDF2-202ENST00000585428 NELFAQ9H3P2 528 aa12.56□□□□□ -0.4
SDF2-202ENST00000585428 FBXO9Q9UK97 447 aaPredicted RBP12.56□□□□□ -0.4
SDF2-202ENST00000585428 ANK2Q01484 3957 aa12.55□□□□□ -0.4
SDF2-202ENST00000585428 WDR91A4D1P6 747 aa12.55□□□□□ -0.4
SDF2-202ENST00000585428 ZNF587BE7ETH6 402 aa12.55□□□□□ -0.4
SDF2-202ENST00000585428 RPL36A-HNRNPH2H7BZ11 118 aa12.55□□□□□ -0.4
SDF2-202ENST00000585428 LILRA1O75019 489 aa12.55□□□□□ -0.4
SDF2-202ENST00000585428 UPK3AO75631 287 aa12.55□□□□□ -0.4
SDF2-202ENST00000585428 KRT33AO76009 404 aa12.55□□□□□ -0.4
SDF2-202ENST00000585428 SNUPNO95149 360 aaKnown RBP12.55□□□□□ -0.4
SDF2-202ENST00000585428 IGKV3-15P01624 115 aa12.55□□□□□ -0.4
SDF2-202ENST00000585428 IGFBP1P08833 259 aaPredicted RBP12.55□□□□□ -0.4
SDF2-202ENST00000585428 TACSTD2P09758 323 aa12.55□□□□□ -0.4
SDF2-202ENST00000585428 TFPTP0C1Z6 253 aa12.55□□□□□ -0.4
SDF2-202ENST00000585428 CECR9P0C854 216 aa12.55□□□□□ -0.4
SDF2-202ENST00000585428 NR2F1P10589 423 aa12.55□□□□□ -0.4
SDF2-202ENST00000585428 ANXA11P50995 505 aaKnown RBP12.55□□□□□ -0.4
SDF2-202ENST00000585428 MVDP53602 400 aa12.55□□□□□ -0.4
SDF2-202ENST00000585428 UFM1P61960 85 aa12.55□□□□□ -0.4
SDF2-202ENST00000585428 CHI3L2Q15782 390 aa12.55□□□□□ -0.4
SDF2-202ENST00000585428 CARTPTQ16568 116 aa12.55□□□□□ -0.4
SDF2-202ENST00000585428 CR1LQ2VPA4 569 aa12.55□□□□□ -0.4
SDF2-202ENST00000585428 WBP2NLQ6ICG8 309 aa12.55□□□□□ -0.4
SDF2-202ENST00000585428 OGFOD2Q6N063 350 aa12.55□□□□□ -0.4
SDF2-202ENST00000585428 PEX5LQ8IYB4 626 aa12.55□□□□□ -0.4
SDF2-202ENST00000585428 TRIML2Q8N7C3 387 aa12.55□□□□□ -0.4
SDF2-202ENST00000585428 ANKK1Q8NFD2 765 aa12.55□□□□□ -0.4
SDF2-202ENST00000585428 OR4F15Q8NGB8 312 aa12.55□□□□□ -0.4
SDF2-202ENST00000585428 HPS1Q92902 700 aa12.55□□□□□ -0.4
SDF2-202ENST00000585428 C1orf159Q96HA4 380 aa12.55□□□□□ -0.4
SDF2-202ENST00000585428 PKNOX2Q96KN3 472 aa12.55□□□□□ -0.4
SDF2-202ENST00000585428 PANX1Q96RD7 426 aa12.55□□□□□ -0.4
SDF2-202ENST00000585428 KCNS3Q9BQ31 491 aa12.55□□□□□ -0.4
SDF2-202ENST00000585428 TMEM109Q9BVC6 243 aa12.55□□□□□ -0.4
SDF2-202ENST00000585428 RAB1BQ9H0U4 201 aa12.55□□□□□ -0.4
SDF2-202ENST00000585428 MEAF6Q9HAF1 191 aa12.55□□□□□ -0.4
SDF2-202ENST00000585428 MOV10Q9HCE1 1003 aaKnown RBP12.55□□□□□ -0.4
SDF2-202ENST00000585428 CHST2Q9Y4C5 530 aa12.55□□□□□ -0.4
SDF2-202ENST00000585428 A0A096LPE4 126 aa12.54□□□□□ -0.4
SDF2-202ENST00000585428 A0A1W2PPZ6 126 aa12.54□□□□□ -0.4
SDF2-202ENST00000585428 LRP5LA4QPB2 252 aa12.54□□□□□ -0.4
SDF2-202ENST00000585428 ZNF432O94892 652 aa12.54□□□□□ -0.4
SDF2-202ENST00000585428 ALDOCP09972 364 aaKnown RBP12.54□□□□□ -0.4
SDF2-202ENST00000585428 CBR1P16152 277 aa12.54□□□□□ -0.4
SDF2-202ENST00000585428 THBS4P35443 961 aa12.54□□□□□ -0.4
SDF2-202ENST00000585428 SLC1A6P48664 564 aa12.54□□□□□ -0.4
SDF2-202ENST00000585428 UBE2NP61088 152 aaKnown RBP12.54□□□□□ -0.4
SDF2-202ENST00000585428 IFFO1Q0D2I5 559 aa12.54□□□□□ -0.4
SDF2-202ENST00000585428 LRRC74AQ0VAA2 488 aa12.54□□□□□ -0.4
SDF2-202ENST00000585428 C1orf140Q5VVS0 124 aa12.54□□□□□ -0.4
SDF2-202ENST00000585428 VHLLQ6RSH7 139 aa12.54□□□□□ -0.4
SDF2-202ENST00000585428 VRK2Q86Y07 508 aa12.54□□□□□ -0.4
SDF2-202ENST00000585428 ZCCHC24Q8N2G6 241 aaKnown RBP12.54□□□□□ -0.4
SDF2-202ENST00000585428 ZNF786Q8N393 782 aa12.54□□□□□ -0.4
SDF2-202ENST00000585428 CLIP4Q8N3C7 705 aa12.54□□□□□ -0.4
SDF2-202ENST00000585428 OR52P1PQ8NH57 321 aa12.54□□□□□ -0.4
SDF2-202ENST00000585428 NEU4Q8WWR8 484 aaPredicted RBP12.54□□□□□ -0.4
SDF2-202ENST00000585428 OR52E6Q96RD3 313 aa12.54□□□□□ -0.4
SDF2-202ENST00000585428 TAPBPLQ9BX59 468 aa12.54□□□□□ -0.4
SDF2-202ENST00000585428 NUF2Q9BZD4 464 aa12.54□□□□□ -0.4
SDF2-202ENST00000585428 HEATR1Q9H583 2144 aaKnown RBP12.54□□□□□ -0.4
SDF2-202ENST00000585428 ZNF442Q9H7R0 627 aa12.54□□□□□ -0.4
SDF2-202ENST00000585428 SEC61A2Q9H9S3 476 aa12.54□□□□□ -0.4
SDF2-202ENST00000585428 ADPRHL2Q9NX46 363 aa12.54□□□□□ -0.4
SDF2-202ENST00000585428 RASD1Q9Y272 281 aa12.54□□□□□ -0.4
SDF2-202ENST00000585428 ARFGEF3Q5TH69 2177 aa12.54□□□□□ -0.4
SDF2-202ENST00000585428 MALRD1Q5VYJ5 2156 aa12.54□□□□□ -0.4
SDF2-202ENST00000585428 DSPPQ9NZW4 1301 aa12.54□□□□□ -0.4
SDF2-202ENST00000585428 FTCDNL1E5RQL4 147 aa12.53□□□□□ -0.4
SDF2-202ENST00000585428 FRS3O43559 492 aa12.53□□□□□ -0.4
SDF2-202ENST00000585428 GSNP06396 782 aa12.53□□□□□ -0.4
SDF2-202ENST00000585428 PRG2P13727 222 aa12.53□□□□□ -0.4
SDF2-202ENST00000585428 DAOP14920 347 aa12.53□□□□□ -0.4
SDF2-202ENST00000585428 IL2RGP31785 369 aa12.53□□□□□ -0.4
SDF2-202ENST00000585428 NME5P56597 212 aa12.53□□□□□ -0.4
SDF2-202ENST00000585428 TUBA1BP68363 451 aa12.53□□□□□ -0.4
SDF2-202ENST00000585428 TUBA4AP68366 448 aa12.53□□□□□ -0.4
SDF2-202ENST00000585428 RIN1Q13671 783 aa12.53□□□□□ -0.4
SDF2-202ENST00000585428 NIPAL3Q6P499 406 aa12.53□□□□□ -0.4
SDF2-202ENST00000585428 ZNF836Q6ZNA1 936 aa12.53□□□□□ -0.4
SDF2-202ENST00000585428 TUBA1AQ71U36 451 aa12.53□□□□□ -0.4
SDF2-202ENST00000585428 KDM8Q8N371 416 aa12.53□□□□□ -0.4
SDF2-202ENST00000585428 RFLNBQ8N5W9 214 aa12.53□□□□□ -0.4
SDF2-202ENST00000585428 MFSD8Q8NHS3 518 aa12.53□□□□□ -0.4
SDF2-202ENST00000585428 STK35Q8TDR2 534 aa12.53□□□□□ -0.4
SDF2-202ENST00000585428 SLC6A13Q9NSD5 602 aa12.53□□□□□ -0.4
SDF2-202ENST00000585428 PNPOQ9NVS9 261 aa12.53□□□□□ -0.4
SDF2-202ENST00000585428 AIG1Q9NVV5 245 aa12.53□□□□□ -0.4
SDF2-202ENST00000585428 TMEFF2Q9UIK5 374 aaPredicted RBP12.53□□□□□ -0.4
SDF2-202ENST00000585428 GPR45Q9Y5Y3 372 aa12.53□□□□□ -0.4
SDF2-202ENST00000585428 A0A096LPI6 279 aa12.52□□□□□ -0.41
SDF2-202ENST00000585428 VSTM5A8MXK1 200 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms