RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	OR4K17	Q8NGC6	315 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	WDR20	Q8TBZ3	569 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	LKAAEAR1	Q8TD35	194 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	DNAJC9	Q8WXX5	260 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	CDKL2	Q92772	493 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	MCUR1	Q96AQ8	359 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	PHF21B	Q96EK2	531 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	C1GALT1C1	Q96EU7	318 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	REXO5	Q96IC2	774 aa	Known RBP	4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	VPS39	Q96JC1	886 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	GPR78	Q96P69	363 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	OR52B2	Q96RD2	323 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	GPR22	Q99680	433 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	NAT9	Q9BTE0	207 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	THTPA	Q9BU02	230 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	KIFC1	Q9BW19	673 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	ASPN	Q9BXN1	380 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	ERVK-6	Q9BXR3	956 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	SHCBP1L	Q9BZQ2	653 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	NPFFR1	Q9GZQ6	430 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	AICDA	Q9GZX7	198 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	PCBD2	Q9H0N5	130 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	ZNF702P	Q9H963	129 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	GLOD4	Q9HC38	313 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	MSL2	Q9HCI7	577 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	RAB18	Q9NP72	206 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	TNFRSF12A	Q9NP84	129 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	PRDM7	Q9NQW5	492 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	BATF3	Q9NR55	127 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	C20orf96	Q9NUD7	363 aa	Predicted RBP	4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	UBAP1	Q9NZ09	502 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	BFAR	Q9NZS9	450 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	STX18	Q9P2W9	335 aa	Known RBP	4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	SCOC	Q9UIL1	159 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	ERVK-19	Q9WJR5	959 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	KLK5	Q9Y337	293 aa	Predicted RBP	4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	CMAHP	Q9Y471	501 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	MAB21L2	Q9Y586	359 aa		4.01	□□□□□ -1.77
MSI2-216	ENST00000582772	NUP214	P35658	2090 aa	Predicted RBP	4	□□□□□ -1.77
MSI2-216	ENST00000582772		A0A0J9YW62	118 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772	MYOCOS	A0A1B0GUC4	107 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772	CCDC189	A1A4V9	331 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772	C7orf72	A4D263	438 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772	TMEM114	B3SHH9	223 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772		E9PBE3	544 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772		H3BNX3	289 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772	TNFSF11	O14788	317 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772	ACOX3	O15254	700 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772	TRIM13	O60858	407 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772	KLHL2	O95198	593 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772	CRTAM	O95727	393 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772	IGKV3-15	P01624	115 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772	IGHV2-70	P01814	119 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772	AHSG	P02765	367 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772	FBP1	P09467	338 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772	CECR9	P0C854	216 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772	SLC35E2B	P0CK96	405 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772	COX4I1	P13073	169 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772	MMP9	P14780	707 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772	ZNF26	P17031	533 aa	Predicted RBP	4	□□□□□ -1.77
MSI2-216	ENST00000582772	RHCE	P18577	417 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772	NT5E	P21589	574 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772	PSMA4	P25789	261 aa	Known RBP	4	□□□□□ -1.77
MSI2-216	ENST00000582772	PIK3R1	P27986	724 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772	PRDX6	P30041	224 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772	FEN1	P39748	380 aa	Known RBP	4	□□□□□ -1.77
MSI2-216	ENST00000582772	ALDH3B1	P43353	468 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772	MAGEB1	P43366	347 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772	EMD	P50402	254 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772	LUM	P51884	338 aa	Predicted RBP	4	□□□□□ -1.77
MSI2-216	ENST00000582772	ACTR3	P61158	418 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772	RAC1	P63000	192 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772	SLC3A1	Q07837	685 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772	COX10	Q12887	443 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772	LAPTM5	Q13571	262 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772	CUL3	Q13618	768 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772	TSTA3	Q13630	321 aa	Predicted RBP	4	□□□□□ -1.77
MSI2-216	ENST00000582772	POU6F1	Q14863	301 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772	TBCC	Q15814	346 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772	MSMP	Q1L6U9	139 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772	CCDC153	Q494R4	210 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772	DNAL1	Q4LDG9	190 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772	FAM209A	Q5JX71	171 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772	PDSS1	Q5T2R2	415 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772	RBM20	Q5T481	1227 aa	Known RBP	4	□□□□□ -1.77
MSI2-216	ENST00000582772	LCE2C	Q5TA81	110 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772	HBM	Q6B0K9	141 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772	OR5M10	Q6IEU7	315 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772	OR52E8	Q6IFG1	317 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772	ZNF774	Q6NX45	483 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772	FRMD7	Q6ZUT3	714 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772	DENND6A	Q8IWF6	608 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772	ST13P4	Q8IZP2	240 aa	Predicted RBP	4	□□□□□ -1.77
MSI2-216	ENST00000582772	TRPV3	Q8NET8	790 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772	OR51D1	Q8NGF3	324 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772	OR5M1	Q8NGP8	315 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772	ACTRT2	Q8TDY3	377 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772	STYX	Q8WUJ0	223 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772	GAL3ST3	Q96A11	431 aa		4	□□□□□ -1.77
MSI2-216	ENST00000582772	TMCO6	Q96DC7	493 aa		4	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms