RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 OR5M10Q6IEU7 315 aa8.44□□□□□ -1.06
SS18-220ENST00000582092 IL20RBQ6UXL0 311 aa8.44□□□□□ -1.06
SS18-220ENST00000582092 C16orf47Q6ZP98 133 aaPredicted RBP8.44□□□□□ -1.06
SS18-220ENST00000582092 TUBA1AQ71U36 451 aa8.44□□□□□ -1.06
SS18-220ENST00000582092 RPS19BP1Q86WX3 136 aaKnown RBP8.44□□□□□ -1.06
SS18-220ENST00000582092 RAB43Q86YS6 212 aa8.44□□□□□ -1.06
SS18-220ENST00000582092 OR51G2Q8NGK0 314 aa8.44□□□□□ -1.06
SS18-220ENST00000582092 STK35Q8TDR2 534 aa8.44□□□□□ -1.06
SS18-220ENST00000582092 ZFAND2BQ8WV99 257 aa8.44□□□□□ -1.06
SS18-220ENST00000582092 SPACA9Q96E40 222 aaPredicted RBP8.44□□□□□ -1.06
SS18-220ENST00000582092 DTNBP1Q96EV8 351 aa8.44□□□□□ -1.06
SS18-220ENST00000582092 WDR77Q9BQA1 342 aaPredicted RBP8.44□□□□□ -1.06
SS18-220ENST00000582092 FAM117AQ9C073 453 aa8.44□□□□□ -1.06
SS18-220ENST00000582092 CDCP1Q9H5V8 836 aa8.44□□□□□ -1.06
SS18-220ENST00000582092 FKRPQ9H9S5 495 aa8.44□□□□□ -1.06
SS18-220ENST00000582092 MCCC2Q9HCC0 563 aa8.44□□□□□ -1.06
SS18-220ENST00000582092 ZNF160Q9HCG1 818 aa8.44□□□□□ -1.06
SS18-220ENST00000582092 MMP25Q9NPA2 562 aa8.44□□□□□ -1.06
SS18-220ENST00000582092 HINT3Q9NQE9 182 aaKnown RBP8.44□□□□□ -1.06
SS18-220ENST00000582092 MRPS18AQ9NVS2 196 aaKnown RBP8.44□□□□□ -1.06
SS18-220ENST00000582092 MED11Q9P086 117 aa8.44□□□□□ -1.06
SS18-220ENST00000582092 ZNF229Q9UJW7 825 aa8.44□□□□□ -1.06
SS18-220ENST00000582092 OSGIN1Q9UJX0 560 aa8.44□□□□□ -1.06
SS18-220ENST00000582092 ZFYVE26Q68DK2 2539 aa8.44□□□□□ -1.06
SS18-220ENST00000582092 TMEM129A0AVI4 362 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 C2orf72A6NCS6 295 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 FAM183AA6NL82 134 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 C21orf140B9A014 251 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 SOCS6O14544 535 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 IMPA2O14732 288 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 RNF13O43567 381 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 ITGA10O75578 1167 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 GABARAPO95166 117 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 APOL3O95236 402 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 SLC2A10O95528 541 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 DLGAP3O95886 979 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 HPP00738 406 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 SCG5P05408 212 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 UMODP07911 640 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 CD14P08571 375 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 AHCYP23526 432 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 DLSTP36957 453 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 AQP2P41181 271 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 CAPZA2P47755 286 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 MAP2K6P52564 334 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 VBP1P61758 197 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 ERVK-25P63136 954 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 ACTC1P68032 377 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 ACTA1P68133 377 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 ROR2Q01974 943 aaKnown RBP8.43□□□□□ -1.06
SS18-220ENST00000582092 PLAURQ03405 335 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 MLLT11Q13015 90 aaPredicted RBP8.43□□□□□ -1.06
SS18-220ENST00000582092 AADACL4Q5VUY2 407 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 SLC22A10Q63ZE4 541 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 GPR139Q6DWJ6 353 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 THSD4Q6ZMP0 1018 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 SLC46A3Q7Z3Q1 461 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 LHFPL3Q86UP9 236 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 IGFN1Q86VF2 1251 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 ACBD7Q8N6N7 88 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 LRRC17Q8N6Y2 441 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 AMER2Q8N7J2 671 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 SLC37A3Q8NCC5 494 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 ATP6V1C2Q8NEY4 427 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 OR10H4Q8NGA5 316 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 OR4K13Q8NH42 304 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 ELP5Q8TE02 316 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 CT55Q8WUE5 264 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 GATAD2BQ8WXI9 593 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 UFD1Q92890 307 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 HGDQ93099 445 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 OR5M11Q96RB7 305 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 SIGLEC11Q96RL6 698 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 RASL10BQ96S79 203 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 SECISBP2Q96T21 854 aaKnown RBP8.43□□□□□ -1.06
SS18-220ENST00000582092 CHCHD6Q9BRQ6 235 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 KATNB1Q9BVA0 655 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 GPR87Q9BY21 358 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 SPRY4Q9C004 299 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 MED20Q9H944 212 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 ISYNA1Q9NPH2 558 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 KLHL1Q9NR64 748 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 INPP5EQ9NRR6 644 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 HPF1Q9NWY4 346 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 ABI3Q9P2A4 366 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 SEC14L4Q9UDX3 406 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 CLEC2DQ9UHP7 191 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 TEKT2Q9UIF3 430 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 TCFL5Q9UL49 500 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 EXOGQ9Y2C4 368 aaKnown RBP8.43□□□□□ -1.06
SS18-220ENST00000582092 GSTK1Q9Y2Q3 226 aa8.43□□□□□ -1.06
SS18-220ENST00000582092 ZZEF1O43149 2961 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 CFAP47Q6ZTR5 3102 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 A0A1W2PRG6 482 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 TMEM72A0PK05 275 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 MCIDASD6RGH6 385 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 C11orf98E9PRG8 122 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 M0R082 166 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 ARPC3O15145 178 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms