RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 KLK3P07288 261 aaPredicted RBP1.68□□□□□ -2.14
SMCHD1-206ENST00000581631 NPIPA8P0DM63 369 aa1.68□□□□□ -2.14
SMCHD1-206ENST00000581631 OPN1MW2P0DN77 364 aa1.68□□□□□ -2.14
SMCHD1-206ENST00000581631 OPN1MW3P0DN78 364 aa1.68□□□□□ -2.14
SMCHD1-206ENST00000581631 CALCBP10092 127 aa1.68□□□□□ -2.14
SMCHD1-206ENST00000581631 POU2F1P14859 743 aa1.68□□□□□ -2.14
SMCHD1-206ENST00000581631 ABOP16442 354 aa1.68□□□□□ -2.14
SMCHD1-206ENST00000581631 ZNF14P17017 642 aaPredicted RBP1.68□□□□□ -2.14
SMCHD1-206ENST00000581631 COX5AP20674 150 aa1.68□□□□□ -2.14
SMCHD1-206ENST00000581631 NT5EP21589 574 aa1.68□□□□□ -2.14
SMCHD1-206ENST00000581631 ACADVLP49748 655 aa1.68□□□□□ -2.14
SMCHD1-206ENST00000581631 PKNOX1P55347 436 aa1.68□□□□□ -2.14
SMCHD1-206ENST00000581631 SMARCB1Q12824 385 aa1.68□□□□□ -2.14
SMCHD1-206ENST00000581631 SLC25A34Q6PIV7 304 aa1.68□□□□□ -2.14
SMCHD1-206ENST00000581631 ZNF836Q6ZNA1 936 aa1.68□□□□□ -2.14
SMCHD1-206ENST00000581631 MOB3BQ86TA1 216 aa1.68□□□□□ -2.14
SMCHD1-206ENST00000581631 ZNF619Q8N2I2 560 aa1.68□□□□□ -2.14
SMCHD1-206ENST00000581631 OR4F15Q8NGB8 312 aa1.68□□□□□ -2.14
SMCHD1-206ENST00000581631 OR10G9Q8NGN4 311 aa1.68□□□□□ -2.14
SMCHD1-206ENST00000581631 MCOLN3Q8TDD5 553 aa1.68□□□□□ -2.14
SMCHD1-206ENST00000581631 FAM3CQ92520 227 aa1.68□□□□□ -2.14
SMCHD1-206ENST00000581631 C4orf36Q96KX1 117 aa1.68□□□□□ -2.14
SMCHD1-206ENST00000581631 ZNF641Q96N77 438 aaPredicted RBP1.68□□□□□ -2.14
SMCHD1-206ENST00000581631 NPAS2Q99743 824 aa1.68□□□□□ -2.14
SMCHD1-206ENST00000581631 TMEM246Q9BRR3 403 aa1.68□□□□□ -2.14
SMCHD1-206ENST00000581631 NIPSNAP3BQ9BS92 247 aa1.68□□□□□ -2.14
SMCHD1-206ENST00000581631 ZNF2Q9BSG1 426 aaPredicted RBP1.68□□□□□ -2.14
SMCHD1-206ENST00000581631 EDEM2Q9BV94 578 aa1.68□□□□□ -2.14
SMCHD1-206ENST00000581631 ACTR6Q9GZN1 396 aa1.68□□□□□ -2.14
SMCHD1-206ENST00000581631 SRMSQ9H3Y6 488 aa1.68□□□□□ -2.14
SMCHD1-206ENST00000581631 ZNF430Q9H8G1 570 aaPredicted RBP1.68□□□□□ -2.14
SMCHD1-206ENST00000581631 HOXC10Q9NYD6 342 aa1.68□□□□□ -2.14
SMCHD1-206ENST00000581631 IL36GQ9NZH8 169 aa1.68□□□□□ -2.14
SMCHD1-206ENST00000581631 NPIPA1Q9UND3 350 aa1.68□□□□□ -2.14
SMCHD1-206ENST00000581631 RASD1Q9Y272 281 aa1.68□□□□□ -2.14
SMCHD1-206ENST00000581631 MFHAS1Q9Y4C4 1052 aa1.68□□□□□ -2.14
SMCHD1-206ENST00000581631 PRPSAP2O60256 369 aa1.67□□□□□ -2.14
SMCHD1-206ENST00000581631 ENTPD5O75356 428 aa1.67□□□□□ -2.14
SMCHD1-206ENST00000581631 IGLV2-23P01705 113 aa1.67□□□□□ -2.14
SMCHD1-206ENST00000581631 UBE2AP49459 152 aa1.67□□□□□ -2.14
SMCHD1-206ENST00000581631 GPM6AP51674 278 aa1.67□□□□□ -2.14
SMCHD1-206ENST00000581631 ENPEPQ07075 957 aa1.67□□□□□ -2.14
SMCHD1-206ENST00000581631 CYTH1Q15438 398 aa1.67□□□□□ -2.14
SMCHD1-206ENST00000581631 TMEM41BQ5BJD5 291 aa1.67□□□□□ -2.14
SMCHD1-206ENST00000581631 MARCH8Q5T0T0 291 aa1.67□□□□□ -2.14
SMCHD1-206ENST00000581631 KPRPQ5T749 579 aaPredicted RBP1.67□□□□□ -2.14
SMCHD1-206ENST00000581631 BLOC1S2Q6QNY1 142 aa1.67□□□□□ -2.14
SMCHD1-206ENST00000581631 GRAMD2AQ8IUY3 354 aa1.67□□□□□ -2.14
SMCHD1-206ENST00000581631 CENPLQ8N0S6 344 aaPredicted RBP1.67□□□□□ -2.14
SMCHD1-206ENST00000581631 CLEC4FQ8N1N0 589 aa1.67□□□□□ -2.14
SMCHD1-206ENST00000581631 RAET1EQ8TD07 263 aa1.67□□□□□ -2.14
SMCHD1-206ENST00000581631 ZFP90Q8TF47 636 aa1.67□□□□□ -2.14
SMCHD1-206ENST00000581631 SPRYD4Q8WW59 207 aaPredicted RBP1.67□□□□□ -2.14
SMCHD1-206ENST00000581631 ITCHQ96J02 903 aa1.67□□□□□ -2.14
SMCHD1-206ENST00000581631 BMFQ96LC9 184 aa1.67□□□□□ -2.14
SMCHD1-206ENST00000581631 MRPL45Q9BRJ2 306 aaKnown RBP1.67□□□□□ -2.14
SMCHD1-206ENST00000581631 DNTTIP1Q9H147 329 aa1.67□□□□□ -2.14
SMCHD1-206ENST00000581631 INPP5EQ9NRR6 644 aa1.67□□□□□ -2.14
SMCHD1-206ENST00000581631 SEC14L3Q9UDX4 400 aa1.67□□□□□ -2.14
SMCHD1-206ENST00000581631 PCYOX1Q9UHG3 505 aa1.67□□□□□ -2.14
SMCHD1-206ENST00000581631 HOOK1Q9UJC3 728 aaKnown RBP1.67□□□□□ -2.14
SMCHD1-206ENST00000581631 COPS3Q9UNS2 423 aa1.67□□□□□ -2.14
SMCHD1-206ENST00000581631 COL5A1P20908 1838 aaPredicted RBP1.66□□□□□ -2.14
SMCHD1-206ENST00000581631 IGLV2-18A0A075B6J9 118 aa1.66□□□□□ -2.14
SMCHD1-206ENST00000581631 A0A087WZY1 265 aa1.66□□□□□ -2.14
SMCHD1-206ENST00000581631 TAPBPO15533 448 aa1.66□□□□□ -2.14
SMCHD1-206ENST00000581631 B4GALT5O43286 388 aa1.66□□□□□ -2.14
SMCHD1-206ENST00000581631 CNR1P21554 472 aa1.66□□□□□ -2.14
SMCHD1-206ENST00000581631 MAPK3P27361 379 aaPredicted RBP1.66□□□□□ -2.14
SMCHD1-206ENST00000581631 HTR2AP28223 471 aa1.66□□□□□ -2.14
SMCHD1-206ENST00000581631 P2RY1P47900 373 aa1.66□□□□□ -2.14
SMCHD1-206ENST00000581631 TDO2P48775 406 aa1.66□□□□□ -2.14
SMCHD1-206ENST00000581631 SPIBQ01892 262 aa1.66□□□□□ -2.14
SMCHD1-206ENST00000581631 GNMTQ14749 295 aa1.66□□□□□ -2.14
SMCHD1-206ENST00000581631 MICBQ29980 383 aa1.66□□□□□ -2.14
SMCHD1-206ENST00000581631 OR52E8Q6IFG1 317 aa1.66□□□□□ -2.14
SMCHD1-206ENST00000581631 LCN12Q6JVE5 192 aa1.66□□□□□ -2.14
SMCHD1-206ENST00000581631 NANOGP8Q6NSW7 305 aa1.66□□□□□ -2.14
SMCHD1-206ENST00000581631 HSDL2Q6YN16 418 aa1.66□□□□□ -2.14
SMCHD1-206ENST00000581631 HMGN2P46Q86SG4 172 aa1.66□□□□□ -2.14
SMCHD1-206ENST00000581631 FAM86B1Q8N7N1 296 aa1.66□□□□□ -2.14
SMCHD1-206ENST00000581631 SH3YL1Q96HL8 342 aaPredicted RBP1.66□□□□□ -2.14
SMCHD1-206ENST00000581631 LINC00477Q96M19 166 aa1.66□□□□□ -2.14
SMCHD1-206ENST00000581631 RSPH9Q9H1X1 276 aaPredicted RBP1.66□□□□□ -2.14
SMCHD1-206ENST00000581631 RBKSQ9H477 322 aa1.66□□□□□ -2.14
SMCHD1-206ENST00000581631 SIRT7Q9NRC8 400 aa1.66□□□□□ -2.14
SMCHD1-206ENST00000581631 KCNIP1Q9NZI2 227 aa1.66□□□□□ -2.14
SMCHD1-206ENST00000581631 RPL36Q9Y3U8 105 aaKnown RBP1.66□□□□□ -2.14
SMCHD1-206ENST00000581631 SF3B1O75533 1304 aaKnown RBP eCLIP1.66□□□□□ -2.148e-8■■□□□ 12.7
SMCHD1-206ENST00000581631 LRP5LA4QPB2 252 aa1.65□□□□□ -2.15
SMCHD1-206ENST00000581631 C12orf77C9JDV5 145 aa1.65□□□□□ -2.15
SMCHD1-206ENST00000581631 LOC110117498-PIK3R3F6TDL0 507 aa1.65□□□□□ -2.15
SMCHD1-206ENST00000581631 PFKFB2O60825 505 aa1.65□□□□□ -2.15
SMCHD1-206ENST00000581631 RBBP9O75884 186 aa1.65□□□□□ -2.15
SMCHD1-206ENST00000581631 C6orf47O95873 294 aa1.65□□□□□ -2.15
SMCHD1-206ENST00000581631 HPGDP15428 266 aa1.65□□□□□ -2.15
SMCHD1-206ENST00000581631 PCMT1P22061 227 aa1.65□□□□□ -2.15
SMCHD1-206ENST00000581631 ACVR1Q04771 509 aa1.65□□□□□ -2.15
SMCHD1-206ENST00000581631 SCGB2A2Q13296 93 aa1.65□□□□□ -2.15
SMCHD1-206ENST00000581631 SLC15A2Q16348 729 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms