RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 HHATLQ9HCP6 504 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 FANCFQ9NPI8 374 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 MEPEQ9NQ76 525 aaPredicted RBP3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 NDE1Q9NXR1 346 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 ADA2Q9NZK5 511 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 NDUFAF4Q9P032 175 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 B3GAT1Q9P2W7 334 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 B4GALT7Q9UBV7 327 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 SEC14L4Q9UDX3 406 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 MAGEL2Q9UJ55 1249 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 DKKL1Q9UK85 242 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 POMPQ9Y244 141 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 RPH3AQ9Y2J0 694 aaPredicted RBP3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 MEMO1Q9Y316 297 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 TMED7Q9Y3B3 224 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 AP4B1Q9Y6B7 739 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 UNC79Q9P2D8 2635 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 HECTD1Q9ULT8 2610 aa3.38□□□□□ -1.87
SMARCE1-215ENST00000578995 ABCA4P78363 2273 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 CELSR2Q9HCU4 2923 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 CENPEQ02224 2701 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 ITPR2Q14571 2701 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 PDZD2O15018 2839 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 APCP25054 2843 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 CACNA1DQ01668 2161 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 ARFGEF3Q5TH69 2177 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 IGKV3D-15A0A087WSY6 115 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 NBPF19A0A087WUL8 3843 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 A0A087WUU8 490 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 A0A0G2JNJ9 132 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 LIPT2A6NK58 231 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 CPSF4LA6NMK7 179 aaKnown RBP3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 CLCA1A8K7I4 914 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 LRRN3E7EW58 273 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 E9PLN8 166 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 H3BML4 177 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 H3BNH8 94 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 H3BNX3 289 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 J3QKU1 62 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 GTPBP1O00178 669 aaKnown RBP3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 CHP2O43745 196 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 CXCL13O43927 109 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 PIP5K1CO60331 668 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 WDR1O75083 606 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 SERPINB7O75635 380 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 TRAPPC6AO75865 159 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 OR5F1O95221 314 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 PMS2P2O95744 297 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 HPRP00739 348 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 CGAP01215 116 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 IGF2P01344 180 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 OPN1LWP04000 364 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 TP53P04637 393 aaPredicted RBP3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 THRBP10828 461 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 PEPDP12955 493 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 HPGDP15428 266 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 TCN1P20061 433 aaPredicted RBP3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 ME2P23368 584 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 ACVR2AP27037 513 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 RYKP34925 604 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 OPRM1P35372 400 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 TIMP3P35625 211 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 APOBEC1P41238 236 aaKnown RBP3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 CCR4P51679 360 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 ZNF41P51814 821 aaPredicted RBP3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 POLR2HP52434 150 aaKnown RBP3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 AGFG1P52594 562 aaKnown RBP3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 SLC16A1P53985 500 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 NUP107P57740 925 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 RGS8P57771 180 aaPredicted RBP3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 FXYD6P3P58550 94 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 RPS4XP62701 263 aaKnown RBP3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 GABPB1Q06547 395 aaPredicted RBP3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 MERTKQ12866 999 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 TRAP1Q12931 704 aaKnown RBP3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 FOXF2Q12947 444 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 MYBPHQ13203 477 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 PIN1Q13526 163 aaPredicted RBP3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 ICAM4Q14773 271 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 KIR3DS1Q14943 382 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 SEC23BQ15437 767 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 EIF2S3LQ2VIR3 472 aaKnown RBP3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 DNAL1Q4LDG9 190 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 IFI44LQ53G44 452 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 SYT14P1Q58G82 188 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 C1orf185Q5T7R7 199 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 RAET1LQ5VY80 246 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 ZNF770Q6IQ21 691 aaPredicted RBP3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 KRTAP5-11Q6L8G4 156 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 C3orf33Q6P1S2 294 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 ULK3Q6PHR2 472 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 CYP2R1Q6VVX0 501 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 C3P1Q6ZMU1 363 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 ESPNLQ6ZVH7 1005 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 ZNF550Q7Z398 422 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 GDF7Q7Z4P5 450 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 LIX1LQ8IVB5 337 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 TMCO5AQ8N6Q1 288 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 ZIC4Q8N9L1 334 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 LRRC75AQ8NAA5 344 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms