RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 SLC35A5Q9BS91 424 aa6.24□□□□□ -1.41
CDK5RAP3-209ENST00000578663 SLITRK2Q9H156 845 aa6.24□□□□□ -1.41
CDK5RAP3-209ENST00000578663 PLK3Q9H4B4 646 aa6.24□□□□□ -1.41
CDK5RAP3-209ENST00000578663 SERHL2Q9H4I8 314 aa6.24□□□□□ -1.41
CDK5RAP3-209ENST00000578663 RMND5AQ9H871 391 aa6.24□□□□□ -1.41
CDK5RAP3-209ENST00000578663 EQTNQ9NQ60 294 aa6.24□□□□□ -1.41
CDK5RAP3-209ENST00000578663 ZCCHC3Q9NUD5 404 aaKnown RBP6.24□□□□□ -1.41
CDK5RAP3-209ENST00000578663 MRGBPQ9NV56 204 aa6.24□□□□□ -1.41
CDK5RAP3-209ENST00000578663 ARL8BQ9NVJ2 186 aa6.24□□□□□ -1.41
CDK5RAP3-209ENST00000578663 HIF1ANQ9NWT6 349 aa6.24□□□□□ -1.41
CDK5RAP3-209ENST00000578663 ASB6Q9NWX5 421 aa6.24□□□□□ -1.41
CDK5RAP3-209ENST00000578663 MED29Q9NX70 200 aa6.24□□□□□ -1.41
CDK5RAP3-209ENST00000578663 SLC25A37Q9NYZ2 338 aa6.24□□□□□ -1.41
CDK5RAP3-209ENST00000578663 LEF1Q9UJU2 399 aaPredicted RBP6.24□□□□□ -1.41
CDK5RAP3-209ENST00000578663 PCDHGB4Q9UN71 923 aa6.24□□□□□ -1.41
CDK5RAP3-209ENST00000578663 NDUFAF1Q9Y375 327 aa6.24□□□□□ -1.41
CDK5RAP3-209ENST00000578663 UBR4Q5T4S7 5183 aa6.24□□□□□ -1.41
CDK5RAP3-209ENST00000578663 WNK2Q9Y3S1 2297 aa6.24□□□□□ -1.41
CDK5RAP3-209ENST00000578663 TRBV5-3A0A0A0MS03 114 aa6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 TRAV20A0A0B4J274 112 aa6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 CCT8L1PA6NM43 557 aa6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 POM121CA8CG34 1229 aa6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 BBIP1A8MTZ0 92 aa6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 PDLIM1O00151 329 aa6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 FXYD1O00168 92 aa6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 ETV2O00321 342 aaPredicted RBP6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 GPR171O14626 319 aa6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 MRASO14807 208 aa6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 PIN1P1O15428 100 aa6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 ANP32DO95626 131 aa6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 IGKV1D-16P01601 117 aa6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 ZCCHC18P0CG32 403 aa6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 ACP2P11117 423 aa6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 UQCRC2P22695 453 aa6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 ZFP36P26651 326 aaKnown RBP6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 SLC7A1P30825 629 aa6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 CHI3L1P36222 383 aaPredicted RBP6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 MAP3K8P41279 467 aa6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 RFX3P48380 749 aa6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 RPS26P62854 115 aaKnown RBP6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 UBA52P62987 128 aaKnown RBP6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 POU3F1Q03052 451 aaPredicted RBP6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 COL10A1Q03692 680 aa6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 LRRC74AQ0VAA2 488 aa6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 TP53BP2Q13625 1128 aa6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 NFYCQ13952 458 aa6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 CYLC2Q14093 348 aaPredicted RBP6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 LASP1Q14847 261 aaKnown RBP6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 TMEM176BQ3YBM2 270 aaPredicted RBP6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 SLC25A53Q5H9E4 307 aa6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 EXOSC6Q5RKV6 272 aaKnown RBP6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 LRIF1Q5T3J3 769 aa6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 DLEU7Q6UYE1 221 aa6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 C6orf120Q7Z4R8 191 aa6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 C1QL2Q7Z5L3 287 aa6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 DHDDSQ86SQ9 333 aa6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 DPP10Q8N608 796 aa6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 WDR31Q8NA23 367 aa6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 OR56A1Q8NGH5 318 aa6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 OR4C3Q8NH37 302 aa6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 B4GALNT2Q8NHY0 566 aa6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 RP9Q8TA86 221 aaKnown RBP6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 PNPT1Q8TCS8 783 aaKnown RBP6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 WDR60Q8WVS4 1066 aa6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 APH1AQ96BI3 265 aa6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 BOD1Q96IK1 185 aa6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 SLC35G5Q96KT7 338 aa6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 MRGPRX4Q96LA9 322 aa6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 MS4A4EQ96PG1 132 aa6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 ZNF300Q96RE9 604 aaPredicted RBP6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 IKZF5Q9H5V7 419 aa6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 ZMAT3Q9HA38 289 aaKnown RBP6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 OBP2BQ9NPH6 170 aa6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 SLC17A5Q9NRA2 495 aa6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 UBQLN4Q9NRR5 601 aa6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 CA10Q9NS85 328 aa6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 GPATCH2Q9NW75 528 aa6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 VAPAQ9P0L0 249 aa6.23□□□□□ -1.41
CDK5RAP3-209ENST00000578663 IGHV3-15A0A0B4J1V0 119 aa6.22□□□□□ -1.41
CDK5RAP3-209ENST00000578663 GXYLT2A0PJZ3 443 aa6.22□□□□□ -1.41
CDK5RAP3-209ENST00000578663 SCDO00767 359 aa6.22□□□□□ -1.41
CDK5RAP3-209ENST00000578663 AIM2O14862 343 aa6.22□□□□□ -1.41
CDK5RAP3-209ENST00000578663 DNPH1O43598 174 aa6.22□□□□□ -1.41
CDK5RAP3-209ENST00000578663 EFNA2O43921 213 aa6.22□□□□□ -1.41
CDK5RAP3-209ENST00000578663 RGS9O75916 674 aaPredicted RBP6.22□□□□□ -1.41
CDK5RAP3-209ENST00000578663 NKX2-2O95096 273 aa6.22□□□□□ -1.41
CDK5RAP3-209ENST00000578663 WNT11O96014 354 aa6.22□□□□□ -1.41
CDK5RAP3-209ENST00000578663 PNPP00491 289 aa6.22□□□□□ -1.41
CDK5RAP3-209ENST00000578663 HMGN2P05204 90 aaKnown RBP6.22□□□□□ -1.41
CDK5RAP3-209ENST00000578663 ITGA5P08648 1049 aa6.22□□□□□ -1.41
CDK5RAP3-209ENST00000578663 IFNGR1P15260 489 aa6.22□□□□□ -1.41
CDK5RAP3-209ENST00000578663 HPGDP15428 266 aa6.22□□□□□ -1.41
CDK5RAP3-209ENST00000578663 MATN1P21941 496 aa6.22□□□□□ -1.41
CDK5RAP3-209ENST00000578663 PRDX6P30041 224 aa6.22□□□□□ -1.41
CDK5RAP3-209ENST00000578663 GABRA3P34903 492 aa6.22□□□□□ -1.41
CDK5RAP3-209ENST00000578663 PRIM2P49643 509 aa6.22□□□□□ -1.41
CDK5RAP3-209ENST00000578663 MVDP53602 400 aa6.22□□□□□ -1.41
CDK5RAP3-209ENST00000578663 SLC16A1P53985 500 aa6.22□□□□□ -1.41
CDK5RAP3-209ENST00000578663 TGFBR3Q03167 851 aa6.22□□□□□ -1.41
CDK5RAP3-209ENST00000578663 SELPLGQ14242 412 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms