RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 A0A1W2PPZ6 126 aa7.76□□□□□ -1.17
SMG6-218ENST00000575454 A8MVM7 634 aa7.76□□□□□ -1.17
SMG6-218ENST00000575454 LYNX1G3V0Z9 82 aa7.76□□□□□ -1.17
SMG6-218ENST00000575454 RPL36A-HNRNPH2H7BZ11 118 aa7.76□□□□□ -1.17
SMG6-218ENST00000575454 J3QLI3 93 aa7.76□□□□□ -1.17
SMG6-218ENST00000575454 NR5A2O00482 541 aa7.76□□□□□ -1.17
SMG6-218ENST00000575454 RNASET2O00584 256 aaKnown RBP7.76□□□□□ -1.17
SMG6-218ENST00000575454 COPEO14579 308 aa7.76□□□□□ -1.17
SMG6-218ENST00000575454 TMPRSS2O15393 492 aa7.76□□□□□ -1.17
SMG6-218ENST00000575454 RIPK2O43353 540 aa7.76□□□□□ -1.17
SMG6-218ENST00000575454 RGS9O75916 674 aaPredicted RBP7.76□□□□□ -1.17
SMG6-218ENST00000575454 GSNP06396 782 aa7.76□□□□□ -1.17
SMG6-218ENST00000575454 OR12D1P0DN82 309 aa7.76□□□□□ -1.17
SMG6-218ENST00000575454 LYNX1P0DP58 116 aa7.76□□□□□ -1.17
SMG6-218ENST00000575454 UQCRC2P22695 453 aa7.76□□□□□ -1.17
SMG6-218ENST00000575454 NR4A1P22736 598 aa7.76□□□□□ -1.17
SMG6-218ENST00000575454 FPR2P25090 351 aa7.76□□□□□ -1.17
SMG6-218ENST00000575454 ECHS1P30084 290 aa7.76□□□□□ -1.17
SMG6-218ENST00000575454 SELENOPP49908 381 aa7.76□□□□□ -1.17
SMG6-218ENST00000575454 RPS23P62266 143 aaKnown RBP7.76□□□□□ -1.17
SMG6-218ENST00000575454 TUBA1BP68363 451 aa7.76□□□□□ -1.17
SMG6-218ENST00000575454 TUBA4AP68366 448 aa7.76□□□□□ -1.17
SMG6-218ENST00000575454 TXNL4AP83876 142 aaKnown RBP7.76□□□□□ -1.17
SMG6-218ENST00000575454 DEFA6Q01524 100 aa7.76□□□□□ -1.17
SMG6-218ENST00000575454 ROR2Q01974 943 aaKnown RBP7.76□□□□□ -1.17
SMG6-218ENST00000575454 SNTB2Q13425 540 aaKnown RBP7.76□□□□□ -1.17
SMG6-218ENST00000575454 OR7A5Q15622 319 aa7.76□□□□□ -1.17
SMG6-218ENST00000575454 WHAMMP3Q1A5X7 153 aa7.76□□□□□ -1.17
SMG6-218ENST00000575454 PGS1Q32NB8 556 aa7.76□□□□□ -1.17
SMG6-218ENST00000575454 ZNF311Q5JNZ3 666 aa7.76□□□□□ -1.17
SMG6-218ENST00000575454 C6orf136Q5SQH8 315 aa7.76□□□□□ -1.17
SMG6-218ENST00000575454 ACSM5Q6NUN0 579 aa7.76□□□□□ -1.17
SMG6-218ENST00000575454 NIPAL3Q6P499 406 aa7.76□□□□□ -1.17
SMG6-218ENST00000575454 THSD4Q6ZMP0 1018 aa7.76□□□□□ -1.17
SMG6-218ENST00000575454 CREB3L2Q70SY1 520 aa7.76□□□□□ -1.17
SMG6-218ENST00000575454 TUBA1AQ71U36 451 aa7.76□□□□□ -1.17
SMG6-218ENST00000575454 TREML1Q86YW5 311 aa7.76□□□□□ -1.17
SMG6-218ENST00000575454 ZNF440Q8IYI8 595 aa7.76□□□□□ -1.17
SMG6-218ENST00000575454 CDK20Q8IZL9 346 aa7.76□□□□□ -1.17
SMG6-218ENST00000575454 BPIFB2Q8N4F0 458 aa7.76□□□□□ -1.17
SMG6-218ENST00000575454 KRTCAP2Q8N6L1 136 aa7.76□□□□□ -1.17
SMG6-218ENST00000575454 LRRC17Q8N6Y2 441 aa7.76□□□□□ -1.17
SMG6-218ENST00000575454 OR4M2Q8NGB6 313 aa7.76□□□□□ -1.17
SMG6-218ENST00000575454 NANPQ8TBE9 248 aa7.76□□□□□ -1.17
SMG6-218ENST00000575454 MZB1Q8WU39 189 aa7.76□□□□□ -1.17
SMG6-218ENST00000575454 CNOT9Q92600 299 aaKnown RBP7.76□□□□□ -1.17
SMG6-218ENST00000575454 ANP32BQ92688 251 aaKnown RBP7.76□□□□□ -1.17
SMG6-218ENST00000575454 MRPL24Q96A35 216 aaKnown RBP7.76□□□□□ -1.17
SMG6-218ENST00000575454 ALKBH3Q96Q83 286 aaPredicted RBP7.76□□□□□ -1.17
SMG6-218ENST00000575454 TPK1Q9H3S4 243 aa7.76□□□□□ -1.17
SMG6-218ENST00000575454 SERHL2Q9H4I8 314 aa7.76□□□□□ -1.17
SMG6-218ENST00000575454 CRLF2Q9HC73 371 aa7.76□□□□□ -1.17
SMG6-218ENST00000575454 DDX28Q9NUL7 540 aaKnown RBP7.76□□□□□ -1.17
SMG6-218ENST00000575454 TREM2Q9NZC2 230 aa7.76□□□□□ -1.17
SMG6-218ENST00000575454 TBK1Q9UHD2 729 aa7.76□□□□□ -1.17
SMG6-218ENST00000575454 PYCARDQ9ULZ3 195 aa7.76□□□□□ -1.17
SMG6-218ENST00000575454 NOX1Q9Y5S8 564 aa7.76□□□□□ -1.17
SMG6-218ENST00000575454 A0A096LPI6 279 aa7.75□□□□□ -1.17
SMG6-218ENST00000575454 A0A1W2PPM1 405 aa7.75□□□□□ -1.17
SMG6-218ENST00000575454 ZC3H12DA2A288 527 aaKnown RBP7.75□□□□□ -1.17
SMG6-218ENST00000575454 AGAP5A6NIR3 686 aa7.75□□□□□ -1.17
SMG6-218ENST00000575454 TMEM229AB2RXF0 380 aa7.75□□□□□ -1.17
SMG6-218ENST00000575454 PPIHO43447 177 aaKnown RBP7.75□□□□□ -1.17
SMG6-218ENST00000575454 NPHS1O60500 1241 aa7.75□□□□□ -1.17
SMG6-218ENST00000575454 BCAS1O75363 584 aaPredicted RBP7.75□□□□□ -1.17
SMG6-218ENST00000575454 SLC43A1O75387 559 aa7.75□□□□□ -1.17
SMG6-218ENST00000575454 UPK3AO75631 287 aa7.75□□□□□ -1.17
SMG6-218ENST00000575454 IGFBP1P08833 259 aaPredicted RBP7.75□□□□□ -1.17
SMG6-218ENST00000575454 GATA3P23771 443 aa7.75□□□□□ -1.17
SMG6-218ENST00000575454 SERPINB5P36952 375 aa7.75□□□□□ -1.17
SMG6-218ENST00000575454 ANXA11P50995 505 aaKnown RBP7.75□□□□□ -1.17
SMG6-218ENST00000575454 CLDN8P56748 225 aa7.75□□□□□ -1.17
SMG6-218ENST00000575454 COPZ1P61923 177 aa7.75□□□□□ -1.17
SMG6-218ENST00000575454 ARF1P84077 181 aaKnown RBP7.75□□□□□ -1.17
SMG6-218ENST00000575454 NPRL3Q12980 569 aa7.75□□□□□ -1.17
SMG6-218ENST00000575454 UGT3A2Q3SY77 523 aa7.75□□□□□ -1.17
SMG6-218ENST00000575454 GPAT3Q53EU6 434 aa7.75□□□□□ -1.17
SMG6-218ENST00000575454 XKR7Q5GH72 579 aa7.75□□□□□ -1.17
SMG6-218ENST00000575454 ELFN2Q5R3F8 820 aa7.75□□□□□ -1.17
SMG6-218ENST00000575454 ANXA8L1Q5VT79 327 aa7.75□□□□□ -1.17
SMG6-218ENST00000575454 PRAMEF8Q5VWM4 474 aa7.75□□□□□ -1.17
SMG6-218ENST00000575454 PRAMEF7Q5VXH5 474 aa7.75□□□□□ -1.17
SMG6-218ENST00000575454 RBMS3Q6XE24 437 aaKnown RBP7.75□□□□□ -1.17
SMG6-218ENST00000575454 FRRS1Q6ZNA5 592 aa7.75□□□□□ -1.17
SMG6-218ENST00000575454 C1QL2Q7Z5L3 287 aa7.75□□□□□ -1.17
SMG6-218ENST00000575454 C10orf107Q8IVU9 208 aa7.75□□□□□ -1.17
SMG6-218ENST00000575454 RIBC1Q8N443 379 aaPredicted RBP7.75□□□□□ -1.17
SMG6-218ENST00000575454 MNS1Q8NEH6 495 aa7.75□□□□□ -1.17
SMG6-218ENST00000575454 OR4A15Q8NGL6 344 aa7.75□□□□□ -1.17
SMG6-218ENST00000575454 ZG16BQ96DA0 208 aa7.75□□□□□ -1.17
SMG6-218ENST00000575454 TRNT1Q96Q11 434 aaKnown RBP7.75□□□□□ -1.17
SMG6-218ENST00000575454 C1orf50Q9BV19 199 aa7.75□□□□□ -1.17
SMG6-218ENST00000575454 GATA5Q9BWX5 397 aaPredicted RBP7.75□□□□□ -1.17
SMG6-218ENST00000575454 DPY30Q9C005 99 aa7.75□□□□□ -1.17
SMG6-218ENST00000575454 DENND2DQ9H6A0 471 aaPredicted RBP7.75□□□□□ -1.17
SMG6-218ENST00000575454 ZNF385DQ9H6B1 395 aa7.75□□□□□ -1.17
SMG6-218ENST00000575454 MTHFD2LQ9H903 347 aaPredicted RBP7.75□□□□□ -1.17
SMG6-218ENST00000575454 PPCSQ9HAB8 311 aa7.75□□□□□ -1.17
SMG6-218ENST00000575454 GRPEL1Q9HAV7 217 aa7.75□□□□□ -1.17
SMG6-218ENST00000575454 NOX3Q9HBY0 568 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms