RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 RCBTB2O95199 551 aa21.6■■□□□ 1.05
ATPAF1-213ENST00000574428 SMIM18P0DKX4 95 aa21.6■■□□□ 1.05
ATPAF1-213ENST00000574428 NUP107P57740 925 aa21.6■■□□□ 1.05
ATPAF1-213ENST00000574428 MOSPD2Q8NHP6 518 aa21.6■■□□□ 1.05
ATPAF1-213ENST00000574428 ZNF417Q8TAU3 575 aa21.6■■□□□ 1.05
ATPAF1-213ENST00000574428 HRASLS5Q96KN8 279 aa21.6■■□□□ 1.05
ATPAF1-213ENST00000574428 ZNF587Q96SQ5 575 aaPredicted RBP21.6■■□□□ 1.05
ATPAF1-213ENST00000574428 PITX2Q99697 317 aa21.6■■□□□ 1.05
ATPAF1-213ENST00000574428 TAPBPLQ9BX59 468 aa21.6■■□□□ 1.05
ATPAF1-213ENST00000574428 TSSK6Q9BXA6 273 aa21.6■■□□□ 1.05
ATPAF1-213ENST00000574428 ASPNQ9BXN1 380 aa21.6■■□□□ 1.05
ATPAF1-213ENST00000574428 LDAHQ9H6V9 325 aa21.6■■□□□ 1.05
ATPAF1-213ENST00000574428 NDRG4Q9ULP0 352 aaKnown RBP21.6■■□□□ 1.05
ATPAF1-213ENST00000574428 A0A0J9YW62 118 aa21.59■■□□□ 1.05
ATPAF1-213ENST00000574428 LINC01387J3KSC0 135 aa21.59■■□□□ 1.05
ATPAF1-213ENST00000574428 GTF2E2P29084 291 aaKnown RBP21.59■■□□□ 1.05
ATPAF1-213ENST00000574428 AQP2P41181 271 aa21.59■■□□□ 1.05
ATPAF1-213ENST00000574428 DIO1P49895 249 aa21.59■■□□□ 1.05
ATPAF1-213ENST00000574428 OR2B6P58173 313 aa21.59■■□□□ 1.05
ATPAF1-213ENST00000574428 GINS1Q14691 196 aa21.59■■□□□ 1.05
ATPAF1-213ENST00000574428 USP51Q70EK9 711 aa21.59■■□□□ 1.05
ATPAF1-213ENST00000574428 IGFN1Q86VF2 1251 aa21.59■■□□□ 1.05
ATPAF1-213ENST00000574428 NEIL3Q8TAT5 605 aa21.59■■□□□ 1.05
ATPAF1-213ENST00000574428 MIB2Q96AX9 1013 aa21.59■■□□□ 1.05
ATPAF1-213ENST00000574428 MUS81Q96NY9 551 aa21.59■■□□□ 1.05
ATPAF1-213ENST00000574428 EXO5Q9H790 373 aa21.59■■□□□ 1.05
ATPAF1-213ENST00000574428 ALKBH4Q9NXW9 302 aa21.59■■□□□ 1.05
ATPAF1-213ENST00000574428 HIF3AQ9Y2N7 669 aa21.59■■□□□ 1.05
ATPAF1-213ENST00000574428 PIEZO2Q9H5I5 2752 aa21.59■■□□□ 1.05
ATPAF1-213ENST00000574428 SULT2B1O00204 365 aa21.59■■□□□ 1.05
ATPAF1-213ENST00000574428 EIF1AYO14602 144 aaKnown RBP21.59■■□□□ 1.05
ATPAF1-213ENST00000574428 WISP2O76076 250 aa21.59■■□□□ 1.05
ATPAF1-213ENST00000574428 BMP7P18075 431 aa21.59■■□□□ 1.05
ATPAF1-213ENST00000574428 UQCRC1P31930 480 aa21.59■■□□□ 1.05
ATPAF1-213ENST00000574428 LHX2P50458 406 aa21.59■■□□□ 1.05
ATPAF1-213ENST00000574428 CTU2Q2VPK5 515 aaKnown RBP21.59■■□□□ 1.05
ATPAF1-213ENST00000574428 RPL13AP3Q6NVV1 102 aa21.59■■□□□ 1.05
ATPAF1-213ENST00000574428 TMPPEQ6ZT21 453 aa21.59■■□□□ 1.05
ATPAF1-213ENST00000574428 CCDC71Q8IV32 467 aaPredicted RBP21.59■■□□□ 1.05
ATPAF1-213ENST00000574428 OR52L1Q8NGH7 329 aa21.59■■□□□ 1.05
ATPAF1-213ENST00000574428 OR4Q3Q8NH05 313 aa21.59■■□□□ 1.05
ATPAF1-213ENST00000574428 OR5J2Q8NH18 312 aa21.59■■□□□ 1.05
ATPAF1-213ENST00000574428 TNFRSF10DQ9UBN6 386 aa21.59■■□□□ 1.05
ATPAF1-213ENST00000574428 TRGV5A0A0B4J1U4 118 aa21.58■■□□□ 1.04
ATPAF1-213ENST00000574428 AKR7A3O95154 331 aa21.58■■□□□ 1.04
ATPAF1-213ENST00000574428 NDUFB2O95178 105 aa21.58■■□□□ 1.04
ATPAF1-213ENST00000574428 GGT2P36268 569 aa21.58■■□□□ 1.04
ATPAF1-213ENST00000574428 GIPRP48546 466 aa21.58■■□□□ 1.04
ATPAF1-213ENST00000574428 SUCLG1P53597 346 aaKnown RBP21.58■■□□□ 1.04
ATPAF1-213ENST00000574428 RPL18Q07020 188 aaKnown RBP21.58■■□□□ 1.04
ATPAF1-213ENST00000574428 PMS2P3Q13401 168 aa21.58■■□□□ 1.04
ATPAF1-213ENST00000574428 KEAP1Q14145 624 aa21.58■■□□□ 1.04
ATPAF1-213ENST00000574428 RPUSD3Q6P087 351 aaKnown RBP21.58■■□□□ 1.04
ATPAF1-213ENST00000574428 SLC27A4Q6P1M0 643 aa21.58■■□□□ 1.04
ATPAF1-213ENST00000574428 PNPLA2Q96AD5 504 aa21.58■■□□□ 1.04
ATPAF1-213ENST00000574428 MRPL39Q9NYK5 338 aaKnown RBP21.58■■□□□ 1.04
ATPAF1-213ENST00000574428 MCIDASD6RGH6 385 aa21.57■■□□□ 1.04
ATPAF1-213ENST00000574428 M0R129 80 aa21.57■■□□□ 1.04
ATPAF1-213ENST00000574428 CDK5Q00535 292 aa21.57■■□□□ 1.04
ATPAF1-213ENST00000574428 MFSD13AQ14CX5 517 aa21.57■■□□□ 1.04
ATPAF1-213ENST00000574428 SGCBQ16585 318 aa21.57■■□□□ 1.04
ATPAF1-213ENST00000574428 ZNF691Q5VV52 312 aa21.57■■□□□ 1.04
ATPAF1-213ENST00000574428 SLX4IPQ5VYV7 408 aa21.57■■□□□ 1.04
ATPAF1-213ENST00000574428 ACSM5Q6NUN0 579 aa21.57■■□□□ 1.04
ATPAF1-213ENST00000574428 SIAH3Q8IW03 269 aa21.57■■□□□ 1.04
ATPAF1-213ENST00000574428 EXD3Q8N9H8 876 aa21.57■■□□□ 1.04
ATPAF1-213ENST00000574428 ABTB1Q969K4 478 aaPredicted RBP21.57■■□□□ 1.04
ATPAF1-213ENST00000574428 IFT27Q9BW83 186 aa21.57■■□□□ 1.04
ATPAF1-213ENST00000574428 SLC25A19Q9HC21 320 aa21.57■■□□□ 1.04
ATPAF1-213ENST00000574428 TAS2R5Q9NYW4 299 aa21.57■■□□□ 1.04
ATPAF1-213ENST00000574428 SPRR3Q9UBC9 169 aa21.57■■□□□ 1.04
ATPAF1-213ENST00000574428 TRAPPC4Q9Y296 219 aa21.57■■□□□ 1.04
ATPAF1-213ENST00000574428 CORINQ9Y5Q5 1042 aa21.57■■□□□ 1.04
ATPAF1-213ENST00000574428 NPIPA5E9PKD4 350 aa21.56■■□□□ 1.04
ATPAF1-213ENST00000574428 PMS2P2O95744 297 aa21.56■■□□□ 1.04
ATPAF1-213ENST00000574428 TSPAN19P0C672 248 aa21.56■■□□□ 1.04
ATPAF1-213ENST00000574428 KLK2P20151 261 aa21.56■■□□□ 1.04
ATPAF1-213ENST00000574428 RPL4P36578 427 aaKnown RBP21.56■■□□□ 1.04
ATPAF1-213ENST00000574428 SMSP52788 366 aa21.56■■□□□ 1.04
ATPAF1-213ENST00000574428 CLDN15P56746 228 aa21.56■■□□□ 1.04
ATPAF1-213ENST00000574428 PRPS1P60891 318 aa21.56■■□□□ 1.04
ATPAF1-213ENST00000574428 INAQ16352 499 aa21.56■■□□□ 1.04
ATPAF1-213ENST00000574428 OR2T33Q8NG76 320 aa21.56■■□□□ 1.04
ATPAF1-213ENST00000574428 FAM81AQ8TBF8 368 aa21.56■■□□□ 1.04
ATPAF1-213ENST00000574428 CHST11Q9NPF2 352 aa21.56■■□□□ 1.04
ATPAF1-213ENST00000574428 NPIPA1Q9UND3 350 aa21.56■■□□□ 1.04
ATPAF1-213ENST00000574428 C11orf98E9PRG8 122 aa21.56■■□□□ 1.04
ATPAF1-213ENST00000574428 PLPP3O14495 311 aa21.56■■□□□ 1.04
ATPAF1-213ENST00000574428 PPP1R3DO95685 299 aa21.56■■□□□ 1.04
ATPAF1-213ENST00000574428 ADORA3P0DMS8 318 aa21.56■■□□□ 1.04
ATPAF1-213ENST00000574428 SLC6A6P31641 620 aa21.56■■□□□ 1.04
ATPAF1-213ENST00000574428 CLDN18P56856 261 aa21.56■■□□□ 1.04
ATPAF1-213ENST00000574428 SLC35A1P78382 337 aa21.56■■□□□ 1.04
ATPAF1-213ENST00000574428 SRYQ05066 204 aa21.56■■□□□ 1.04
ATPAF1-213ENST00000574428 PGGHGQ32M88 737 aa21.56■■□□□ 1.04
ATPAF1-213ENST00000574428 ALG10Q5BKT4 473 aa21.56■■□□□ 1.04
ATPAF1-213ENST00000574428 HBMQ6B0K9 141 aa21.56■■□□□ 1.04
ATPAF1-213ENST00000574428 ESPNLQ6ZVH7 1005 aa21.56■■□□□ 1.04
ATPAF1-213ENST00000574428 H1FNTQ75WM6 255 aaPredicted RBP21.56■■□□□ 1.04
ATPAF1-213ENST00000574428 SCAIQ8N9R8 606 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms