RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 ATAD3AQ9NVI7 634 aa7.43□□□□□ -1.22
SMG1-216ENST00000569122 FBXL3Q9UKT7 428 aa7.43□□□□□ -1.22
SMG1-216ENST00000569122 SAR1BQ9Y6B6 198 aa7.43□□□□□ -1.22
SMG1-216ENST00000569122 WNK1Q9H4A3 2382 aa7.43□□□□□ -1.22
SMG1-216ENST00000569122 HEATR1Q9H583 2144 aaKnown RBP7.42□□□□□ -1.22
SMG1-216ENST00000569122 TMED7-TICAM2A0A0A6YYA0 188 aa7.42□□□□□ -1.22
SMG1-216ENST00000569122 A0A1W2PPW3 197 aa7.42□□□□□ -1.22
SMG1-216ENST00000569122 AGAP5A6NIR3 686 aa7.42□□□□□ -1.22
SMG1-216ENST00000569122 AQP7P3A6NL99 342 aa7.42□□□□□ -1.22
SMG1-216ENST00000569122 TMEM114B3SHH9 223 aa7.42□□□□□ -1.22
SMG1-216ENST00000569122 CLDN25C9JDP6 229 aa7.42□□□□□ -1.22
SMG1-216ENST00000569122 DEAF1O75398 565 aaPredicted RBP7.42□□□□□ -1.22
SMG1-216ENST00000569122 RP2O75695 350 aa7.42□□□□□ -1.22
SMG1-216ENST00000569122 UGT2B17O75795 530 aa7.42□□□□□ -1.22
SMG1-216ENST00000569122 ZNF432O94892 652 aa7.42□□□□□ -1.22
SMG1-216ENST00000569122 IGHV2-5P01817 119 aa7.42□□□□□ -1.22
SMG1-216ENST00000569122 MT-ND5P03915 603 aa7.42□□□□□ -1.22
SMG1-216ENST00000569122 NEFHP12036 1026 aa7.42□□□□□ -1.22
SMG1-216ENST00000569122 CCNA2P20248 432 aa7.42□□□□□ -1.22
SMG1-216ENST00000569122 MDKP21741 143 aaPredicted RBP7.42□□□□□ -1.22
SMG1-216ENST00000569122 RYKP34925 604 aa7.42□□□□□ -1.22
SMG1-216ENST00000569122 PGM1P36871 562 aa7.42□□□□□ -1.22
SMG1-216ENST00000569122 CRYBB2P43320 205 aa7.42□□□□□ -1.22
SMG1-216ENST00000569122 ALDH3B1P43353 468 aa7.42□□□□□ -1.22
SMG1-216ENST00000569122 CAPZA2P47755 286 aa7.42□□□□□ -1.22
SMG1-216ENST00000569122 TUBA1BP68363 451 aa7.42□□□□□ -1.22
SMG1-216ENST00000569122 TUBA4AP68366 448 aa7.42□□□□□ -1.22
SMG1-216ENST00000569122 ROR2Q01974 943 aaKnown RBP7.42□□□□□ -1.22
SMG1-216ENST00000569122 MVKQ03426 396 aa7.42□□□□□ -1.22
SMG1-216ENST00000569122 SLC3A1Q07837 685 aa7.42□□□□□ -1.22
SMG1-216ENST00000569122 HFEQ30201 348 aa7.42□□□□□ -1.22
SMG1-216ENST00000569122 ARHGAP11BQ3KRB8 267 aa7.42□□□□□ -1.22
SMG1-216ENST00000569122 ZNF385BQ569K4 471 aa7.42□□□□□ -1.22
SMG1-216ENST00000569122 ATAD3BQ5T9A4 648 aa7.42□□□□□ -1.22
SMG1-216ENST00000569122 AP1ARQ63HQ0 302 aa7.42□□□□□ -1.22
SMG1-216ENST00000569122 TUBA1AQ71U36 451 aa7.42□□□□□ -1.22
SMG1-216ENST00000569122 FBXO25Q8TCJ0 367 aa7.42□□□□□ -1.22
SMG1-216ENST00000569122 SNX33Q8WV41 574 aa7.42□□□□□ -1.22
SMG1-216ENST00000569122 YIPF5Q969M3 257 aa7.42□□□□□ -1.22
SMG1-216ENST00000569122 ZNF385AQ96PM9 386 aaKnown RBP7.42□□□□□ -1.22
SMG1-216ENST00000569122 TSSK3Q96PN8 268 aa7.42□□□□□ -1.22
SMG1-216ENST00000569122 DUX5Q96PT3 197 aa7.42□□□□□ -1.22
SMG1-216ENST00000569122 OR7D2Q96RA2 312 aa7.42□□□□□ -1.22
SMG1-216ENST00000569122 KCNA7Q96RP8 456 aa7.42□□□□□ -1.22
SMG1-216ENST00000569122 NAPGQ99747 312 aaPredicted RBP7.42□□□□□ -1.22
SMG1-216ENST00000569122 SLC30A2Q9BRI3 323 aa7.42□□□□□ -1.22
SMG1-216ENST00000569122 MRI1Q9BV20 369 aa7.42□□□□□ -1.22
SMG1-216ENST00000569122 MS4A7Q9GZW8 240 aaPredicted RBP7.42□□□□□ -1.22
SMG1-216ENST00000569122 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.42□□□□□ -1.22
SMG1-216ENST00000569122 SIRT3Q9NTG7 399 aaPredicted RBP7.42□□□□□ -1.22
SMG1-216ENST00000569122 DECR2Q9NUI1 292 aa7.42□□□□□ -1.22
SMG1-216ENST00000569122 GPATCH2Q9NW75 528 aa7.42□□□□□ -1.22
SMG1-216ENST00000569122 NKIRAS2Q9NYR9 191 aa7.42□□□□□ -1.22
SMG1-216ENST00000569122 OPN4Q9UHM6 478 aa7.42□□□□□ -1.22
SMG1-216ENST00000569122 MID2Q9UJV3 735 aa7.42□□□□□ -1.22
SMG1-216ENST00000569122 RASD1Q9Y272 281 aa7.42□□□□□ -1.22
SMG1-216ENST00000569122 TMED7Q9Y3B3 224 aa7.42□□□□□ -1.22
SMG1-216ENST00000569122 DSPPQ9NZW4 1301 aa7.42□□□□□ -1.22
SMG1-216ENST00000569122 TMEM229AB2RXF0 380 aa7.41□□□□□ -1.22
SMG1-216ENST00000569122 C3orf80F5H4A9 247 aa7.41□□□□□ -1.22
SMG1-216ENST00000569122 SNRPAP09012 282 aaKnown RBP7.41□□□□□ -1.22
SMG1-216ENST00000569122 SBK3P0C264 359 aa7.41□□□□□ -1.22
SMG1-216ENST00000569122 UROSP10746 265 aa7.41□□□□□ -1.22
SMG1-216ENST00000569122 IMPDH2P12268 514 aa7.41□□□□□ -1.22
SMG1-216ENST00000569122 BCKDHAP12694 445 aa7.41□□□□□ -1.22
SMG1-216ENST00000569122 MATN1P21941 496 aa7.41□□□□□ -1.22
SMG1-216ENST00000569122 MAPK1P28482 360 aa7.41□□□□□ -1.22
SMG1-216ENST00000569122 PCGF2P35227 344 aa7.41□□□□□ -1.22
SMG1-216ENST00000569122 IDH2P48735 452 aaKnown RBP7.41□□□□□ -1.22
SMG1-216ENST00000569122 SELENOPP49908 381 aa7.41□□□□□ -1.22
SMG1-216ENST00000569122 ETF1P62495 437 aaKnown RBP7.41□□□□□ -1.22
SMG1-216ENST00000569122 CEACAM7Q14002 265 aa7.41□□□□□ -1.22
SMG1-216ENST00000569122 GNA13Q14344 377 aa7.41□□□□□ -1.22
SMG1-216ENST00000569122 PDCD1Q15116 288 aa7.41□□□□□ -1.22
SMG1-216ENST00000569122 SLC9A3R2Q15599 337 aa7.41□□□□□ -1.22
SMG1-216ENST00000569122 GSTA3Q16772 222 aa7.41□□□□□ -1.22
SMG1-216ENST00000569122 NKPD1Q17RQ9 610 aa7.41□□□□□ -1.22
SMG1-216ENST00000569122 FAM205BPQ63HN1 556 aa7.41□□□□□ -1.22
SMG1-216ENST00000569122 NIPAL3Q6P499 406 aa7.41□□□□□ -1.22
SMG1-216ENST00000569122 EMBQ6PCB8 327 aa7.41□□□□□ -1.22
SMG1-216ENST00000569122 CREB3L2Q70SY1 520 aa7.41□□□□□ -1.22
SMG1-216ENST00000569122 SPATC1Q76KD6 591 aa7.41□□□□□ -1.22
SMG1-216ENST00000569122 C16orf62Q7Z3J2 963 aa7.41□□□□□ -1.22
SMG1-216ENST00000569122 SNX32Q86XE0 403 aa7.41□□□□□ -1.22
SMG1-216ENST00000569122 GPR137CQ8N3F9 429 aa7.41□□□□□ -1.22
SMG1-216ENST00000569122 TMEM99Q8N816 258 aa7.41□□□□□ -1.22
SMG1-216ENST00000569122 CPEB3Q8NE35 698 aaKnown RBP7.41□□□□□ -1.22
SMG1-216ENST00000569122 FAM71CQ8NEG0 241 aa7.41□□□□□ -1.22
SMG1-216ENST00000569122 WFDC12Q8WWY7 111 aa7.41□□□□□ -1.22
SMG1-216ENST00000569122 DNAJA3Q96EY1 480 aa7.41□□□□□ -1.22
SMG1-216ENST00000569122 ALKBH3Q96Q83 286 aaPredicted RBP7.41□□□□□ -1.22
SMG1-216ENST00000569122 CITED1Q99966 193 aa7.41□□□□□ -1.22
SMG1-216ENST00000569122 GAL3ST1Q99999 423 aa7.41□□□□□ -1.22
SMG1-216ENST00000569122 SYT3Q9BQG1 590 aa7.41□□□□□ -1.22
SMG1-216ENST00000569122 TSPYL1Q9H0U9 437 aa7.41□□□□□ -1.22
SMG1-216ENST00000569122 SEC61A2Q9H9S3 476 aa7.41□□□□□ -1.22
SMG1-216ENST00000569122 HINT3Q9NQE9 182 aaKnown RBP7.41□□□□□ -1.22
SMG1-216ENST00000569122 SLCO1C1Q9NYB5 712 aa7.41□□□□□ -1.22
SMG1-216ENST00000569122 PDP1Q9P0J1 537 aaPredicted RBP7.41□□□□□ -1.22
SMG1-216ENST00000569122 ATP6V1HQ9UI12 483 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms