RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 PRAMEF8Q5VWM4 474 aa13.49□□□□□ -0.25
NME3-211ENST00000568561 PRAMEF7Q5VXH5 474 aa13.49□□□□□ -0.25
NME3-211ENST00000568561 TMEM225Q6GV28 225 aa13.49□□□□□ -0.25
NME3-211ENST00000568561 CREB3L2Q70SY1 520 aa13.49□□□□□ -0.25
NME3-211ENST00000568561 EPHX4Q8IUS5 362 aa13.49□□□□□ -0.25
NME3-211ENST00000568561 PEX5LQ8IYB4 626 aa13.49□□□□□ -0.25
NME3-211ENST00000568561 ZCCHC24Q8N2G6 241 aaKnown RBP13.49□□□□□ -0.25
NME3-211ENST00000568561 KDM8Q8N371 416 aa13.49□□□□□ -0.25
NME3-211ENST00000568561 OR52P1PQ8NH57 321 aa13.49□□□□□ -0.25
NME3-211ENST00000568561 BCL2L2Q92843 193 aaPredicted RBP13.49□□□□□ -0.25
NME3-211ENST00000568561 TAPBPLQ9BX59 468 aa13.49□□□□□ -0.25
NME3-211ENST00000568561 MEAF6Q9HAF1 191 aa13.49□□□□□ -0.25
NME3-211ENST00000568561 LOC390937A0A1W2PQ73 354 aa13.48□□□□□ -0.25
NME3-211ENST00000568561 A8MVM7 634 aa13.48□□□□□ -0.25
NME3-211ENST00000568561 SDHDO14521 159 aa13.48□□□□□ -0.25
NME3-211ENST00000568561 BIRC5O15392 142 aa13.48□□□□□ -0.25
NME3-211ENST00000568561 BCHEP06276 602 aa13.48□□□□□ -0.25
NME3-211ENST00000568561 C8BP07358 591 aa13.48□□□□□ -0.25
NME3-211ENST00000568561 ETFAP13804 333 aa13.48□□□□□ -0.25
NME3-211ENST00000568561 NCF2P19878 526 aaPredicted RBP13.48□□□□□ -0.25
NME3-211ENST00000568561 IL2RGP31785 369 aa13.48□□□□□ -0.25
NME3-211ENST00000568561 ANXA11P50995 505 aaKnown RBP13.48□□□□□ -0.25
NME3-211ENST00000568561 MAP2K6P52564 334 aa13.48□□□□□ -0.25
NME3-211ENST00000568561 MPP2Q14168 576 aa13.48□□□□□ -0.25
NME3-211ENST00000568561 GSTA3Q16772 222 aa13.48□□□□□ -0.25
NME3-211ENST00000568561 CR1LQ2VPA4 569 aa13.48□□□□□ -0.25
NME3-211ENST00000568561 LIN52Q52LA3 116 aa13.48□□□□□ -0.25
NME3-211ENST00000568561 C1orf140Q5VVS0 124 aa13.48□□□□□ -0.25
NME3-211ENST00000568561 ATG16L1Q676U5 607 aa13.48□□□□□ -0.25
NME3-211ENST00000568561 WBP2NLQ6ICG8 309 aa13.48□□□□□ -0.25
NME3-211ENST00000568561 OGFOD2Q6N063 350 aa13.48□□□□□ -0.25
NME3-211ENST00000568561 ABHD12BQ7Z5M8 362 aaPredicted RBP13.48□□□□□ -0.25
NME3-211ENST00000568561 ZNF440Q8IYI8 595 aa13.48□□□□□ -0.25
NME3-211ENST00000568561 CLIP4Q8N3C7 705 aa13.48□□□□□ -0.25
NME3-211ENST00000568561 KATNB1Q9BVA0 655 aa13.48□□□□□ -0.25
NME3-211ENST00000568561 WDR55Q9H6Y2 383 aaPredicted RBP13.48□□□□□ -0.25
NME3-211ENST00000568561 OBP2BQ9NPH6 170 aa13.48□□□□□ -0.25
NME3-211ENST00000568561 SEC14L4Q9UDX3 406 aa13.48□□□□□ -0.25
NME3-211ENST00000568561 ZNF443Q9Y2A4 671 aaPredicted RBP13.48□□□□□ -0.25
NME3-211ENST00000568561 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.48□□□□□ -0.25
NME3-211ENST00000568561 TENM1Q9UKZ4 2725 aa13.48□□□□□ -0.25
NME3-211ENST00000568561 DSPPQ9NZW4 1301 aa13.47□□□□□ -0.25
NME3-211ENST00000568561 B9A039 149 aa13.47□□□□□ -0.25
NME3-211ENST00000568561 ZNF23P17027 643 aa13.47□□□□□ -0.25
NME3-211ENST00000568561 HNF1AP20823 631 aa13.47□□□□□ -0.25
NME3-211ENST00000568561 THBS2P35442 1172 aa13.47□□□□□ -0.25
NME3-211ENST00000568561 MVDP53602 400 aa13.47□□□□□ -0.25
NME3-211ENST00000568561 COPZ1P61923 177 aa13.47□□□□□ -0.25
NME3-211ENST00000568561 HOXC5Q00444 222 aa13.47□□□□□ -0.25
NME3-211ENST00000568561 ROR2Q01974 943 aaKnown RBP13.47□□□□□ -0.25
NME3-211ENST00000568561 HGFACQ04756 655 aa13.47□□□□□ -0.25
NME3-211ENST00000568561 BST1Q10588 318 aa13.47□□□□□ -0.25
NME3-211ENST00000568561 GTDC1Q4AE62 458 aa13.47□□□□□ -0.25
NME3-211ENST00000568561 ANKRD16Q6P6B7 361 aa13.47□□□□□ -0.25
NME3-211ENST00000568561 SERPINA11Q86U17 422 aa13.47□□□□□ -0.25
NME3-211ENST00000568561 LRRC34Q8IZ02 419 aa13.47□□□□□ -0.25
NME3-211ENST00000568561 SVOPLQ8N434 492 aa13.47□□□□□ -0.25
NME3-211ENST00000568561 SLC25A36Q96CQ1 311 aa13.47□□□□□ -0.25
NME3-211ENST00000568561 BOD1Q96IK1 185 aa13.47□□□□□ -0.25
NME3-211ENST00000568561 PLK3Q9H4B4 646 aa13.47□□□□□ -0.25
NME3-211ENST00000568561 P2RX2Q9UBL9 471 aa13.47□□□□□ -0.25
NME3-211ENST00000568561 HAO1Q9UJM8 370 aa13.47□□□□□ -0.25
NME3-211ENST00000568561 CHST2Q9Y4C5 530 aa13.47□□□□□ -0.25
NME3-211ENST00000568561 GPR45Q9Y5Y3 372 aa13.47□□□□□ -0.25
NME3-211ENST00000568561 ARPC4-TTLL3A0A0A6YYG9 625 aa13.46□□□□□ -0.25
NME3-211ENST00000568561 ZNF503-AS2A6NEH8 195 aa13.46□□□□□ -0.25
NME3-211ENST00000568561 TMEM229AB2RXF0 380 aa13.46□□□□□ -0.25
NME3-211ENST00000568561 hCG_2039718K7EN88 272 aa13.46□□□□□ -0.25
NME3-211ENST00000568561 RFXANKO14593 260 aa13.46□□□□□ -0.25
NME3-211ENST00000568561 RGS16O15492 202 aaPredicted RBP13.46□□□□□ -0.25
NME3-211ENST00000568561 SEC14L2O76054 403 aa13.46□□□□□ -0.25
NME3-211ENST00000568561 PNMTP11086 282 aa13.46□□□□□ -0.25
NME3-211ENST00000568561 EPHA3P29320 983 aa13.46□□□□□ -0.25
NME3-211ENST00000568561 THBS4P35443 961 aa13.46□□□□□ -0.25
NME3-211ENST00000568561 CRATP43155 626 aa13.46□□□□□ -0.25
NME3-211ENST00000568561 PPOXP50336 477 aa13.46□□□□□ -0.25
NME3-211ENST00000568561 IDH3GP51553 393 aaPredicted RBP13.46□□□□□ -0.25
NME3-211ENST00000568561 CLDN17P56750 224 aa13.46□□□□□ -0.25
NME3-211ENST00000568561 ARF1P84077 181 aaKnown RBP13.46□□□□□ -0.25
NME3-211ENST00000568561 STX3Q13277 289 aa13.46□□□□□ -0.25
NME3-211ENST00000568561 EFNB3Q15768 340 aa13.46□□□□□ -0.25
NME3-211ENST00000568561 C1QTNF12Q5T7M4 302 aa13.46□□□□□ -0.25
NME3-211ENST00000568561 C1orf159Q96HA4 380 aa13.46□□□□□ -0.25
NME3-211ENST00000568561 TMEM19Q96HH6 336 aa13.46□□□□□ -0.25
NME3-211ENST00000568561 ZBTB18Q99592 522 aa13.46□□□□□ -0.25
NME3-211ENST00000568561 PAIP2Q9BPZ3 127 aaKnown RBP13.46□□□□□ -0.25
NME3-211ENST00000568561 TMEM109Q9BVC6 243 aa13.46□□□□□ -0.25
NME3-211ENST00000568561 CENPHQ9H3R5 247 aa13.46□□□□□ -0.25
NME3-211ENST00000568561 PIF1Q9H611 641 aa13.46□□□□□ -0.25
NME3-211ENST00000568561 MYOZ1Q9NP98 299 aaPredicted RBP13.46□□□□□ -0.25
NME3-211ENST00000568561 CRNNQ9UBG3 495 aaPredicted RBP13.46□□□□□ -0.25
NME3-211ENST00000568561 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.46□□□□□ -0.25
NME3-211ENST00000568561 V9GYY5 206 aaPredicted RBP13.46□□□□□ -0.25
NME3-211ENST00000568561 SH3PXD2BA1X283 911 aa13.45□□□□□ -0.26
NME3-211ENST00000568561 FTCDNL1E5RQL4 147 aa13.45□□□□□ -0.26
NME3-211ENST00000568561 NPIPB7O75200 414 aa13.45□□□□□ -0.26
NME3-211ENST00000568561 PDE5AO76074 875 aa13.45□□□□□ -0.26
NME3-211ENST00000568561 VAMP5O95183 116 aa13.45□□□□□ -0.26
NME3-211ENST00000568561 AHSA1O95433 338 aa13.45□□□□□ -0.26
NME3-211ENST00000568561 STAMBPO95630 424 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms