RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 SLC38A4Q969I6 547 aa6.96□□□□□ -1.3
SMG1-214ENST00000568038 SNRNP40Q96DI7 357 aaKnown RBP6.96□□□□□ -1.3
SMG1-214ENST00000568038 DNAJA3Q96EY1 480 aa6.96□□□□□ -1.3
SMG1-214ENST00000568038 POLR2J2Q9GZM3 115 aaKnown RBP6.96□□□□□ -1.3
SMG1-214ENST00000568038 POLR2J3Q9H1A7 115 aaKnown RBP6.96□□□□□ -1.3
SMG1-214ENST00000568038 SEMA6AQ9H2E6 1030 aa6.96□□□□□ -1.3
SMG1-214ENST00000568038 ACKR4Q9NPB9 350 aa6.96□□□□□ -1.3
SMG1-214ENST00000568038 SERINC1Q9NRX5 453 aa6.96□□□□□ -1.3
SMG1-214ENST00000568038 MAN2C1Q9NTJ4 1040 aa6.96□□□□□ -1.3
SMG1-214ENST00000568038 ASF1BQ9NVP2 202 aa6.96□□□□□ -1.3
SMG1-214ENST00000568038 VNN3Q9NY84 501 aa6.96□□□□□ -1.3
SMG1-214ENST00000568038 CHRNA9Q9UGM1 479 aa6.96□□□□□ -1.3
SMG1-214ENST00000568038 ACAD8Q9UKU7 415 aa6.96□□□□□ -1.3
SMG1-214ENST00000568038 ZNF337Q9Y3M9 751 aa6.96□□□□□ -1.3
SMG1-214ENST00000568038 SAMHD1Q9Y3Z3 626 aaKnown RBP6.96□□□□□ -1.3
SMG1-214ENST00000568038 U3KQV3 271 aa6.96□□□□□ -1.3
SMG1-214ENST00000568038 ACACBO00763 2458 aa6.95□□□□□ -1.3
SMG1-214ENST00000568038 MED12Q93074 2177 aa6.95□□□□□ -1.3
SMG1-214ENST00000568038 A0A087WUJ7 227 aa6.95□□□□□ -1.3
SMG1-214ENST00000568038 TRBV4-1A0A0J9YWV2 114 aa6.95□□□□□ -1.3
SMG1-214ENST00000568038 TNFRSF11BO00300 401 aa6.95□□□□□ -1.3
SMG1-214ENST00000568038 KPNA4O00629 521 aaPredicted RBP6.95□□□□□ -1.3
SMG1-214ENST00000568038 ADAMDEC1O15204 470 aa6.95□□□□□ -1.3
SMG1-214ENST00000568038 CLOCKO15516 846 aa6.95□□□□□ -1.3
SMG1-214ENST00000568038 E2F6O75461 281 aa6.95□□□□□ -1.3
SMG1-214ENST00000568038 LDLRP01130 860 aa6.95□□□□□ -1.3
SMG1-214ENST00000568038 IGHG3P01860 377 aa6.95□□□□□ -1.3
SMG1-214ENST00000568038 THRBP10828 461 aa6.95□□□□□ -1.3
SMG1-214ENST00000568038 PNMTP11086 282 aa6.95□□□□□ -1.3
SMG1-214ENST00000568038 ZNF17P17021 662 aa6.95□□□□□ -1.3
SMG1-214ENST00000568038 POU3F2P20265 443 aaPredicted RBP6.95□□□□□ -1.3
SMG1-214ENST00000568038 FASP25445 335 aa6.95□□□□□ -1.3
SMG1-214ENST00000568038 SHC1P29353 583 aa6.95□□□□□ -1.3
SMG1-214ENST00000568038 SFTPDP35247 375 aa6.95□□□□□ -1.3
SMG1-214ENST00000568038 MLLT10P55197 1068 aa6.95□□□□□ -1.3
SMG1-214ENST00000568038 SRYQ05066 204 aa6.95□□□□□ -1.3
SMG1-214ENST00000568038 SELENBP1Q13228 472 aa6.95□□□□□ -1.3
SMG1-214ENST00000568038 RCN1Q15293 331 aa6.95□□□□□ -1.3
SMG1-214ENST00000568038 EXOC3L2Q2M3D2 409 aa6.95□□□□□ -1.3
SMG1-214ENST00000568038 TMEM176BQ3YBM2 270 aaPredicted RBP6.95□□□□□ -1.3
SMG1-214ENST00000568038 DCST1Q5T197 706 aa6.95□□□□□ -1.3
SMG1-214ENST00000568038 C1QL3Q5VWW1 255 aa6.95□□□□□ -1.3
SMG1-214ENST00000568038 HMBOX1Q6NT76 420 aa6.95□□□□□ -1.3
SMG1-214ENST00000568038 C3orf33Q6P1S2 294 aa6.95□□□□□ -1.3
SMG1-214ENST00000568038 PODNL1Q6PEZ8 512 aa6.95□□□□□ -1.3
SMG1-214ENST00000568038 TTC33Q6PID6 262 aaPredicted RBP6.95□□□□□ -1.3
SMG1-214ENST00000568038 TBPL2Q6SJ96 375 aa6.95□□□□□ -1.3
SMG1-214ENST00000568038 ZNF730Q6ZMV8 503 aa6.95□□□□□ -1.3
SMG1-214ENST00000568038 TRILQ7L0X0 811 aa6.95□□□□□ -1.3
SMG1-214ENST00000568038 RRM2BQ7LG56 351 aa6.95□□□□□ -1.3
SMG1-214ENST00000568038 UBQLNLQ8IYU4 475 aa6.95□□□□□ -1.3
SMG1-214ENST00000568038 FAR1Q8WVX9 515 aa6.95□□□□□ -1.3
SMG1-214ENST00000568038 ABTB1Q969K4 478 aaPredicted RBP6.95□□□□□ -1.3
SMG1-214ENST00000568038 MPP4Q96JB8 637 aa6.95□□□□□ -1.3
SMG1-214ENST00000568038 PKP2Q99959 881 aa6.95□□□□□ -1.3
SMG1-214ENST00000568038 PRSS27Q9BQR3 290 aa6.95□□□□□ -1.3
SMG1-214ENST00000568038 JAM3Q9BX67 310 aa6.95□□□□□ -1.3
SMG1-214ENST00000568038 OR11A1Q9GZK7 315 aa6.95□□□□□ -1.3
SMG1-214ENST00000568038 REEP1Q9H902 201 aa6.95□□□□□ -1.3
SMG1-214ENST00000568038 DNAJB9Q9UBS3 223 aa6.95□□□□□ -1.3
SMG1-214ENST00000568038 PRDM4Q9UKN5 801 aa6.95□□□□□ -1.3
SMG1-214ENST00000568038 LYVE1Q9Y5Y7 322 aa6.95□□□□□ -1.3
SMG1-214ENST00000568038 ASPMQ8IZT6 3477 aa6.95□□□□□ -1.3
SMG1-214ENST00000568038 CHD8Q9HCK8 2581 aa6.95□□□□□ -1.3
SMG1-214ENST00000568038 DMXL2Q8TDJ6 3036 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 IGKV1D-42A0A075B6H8 117 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 A0A087WUU8 490 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 A0A1B0GTH9 108 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 A0A1W2PRQ8 180 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 A8MVM7 634 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 NPIPA2E9PIF3 369 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 NPIPA3F8WFD2 350 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 H0YC42 278 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 SEC14L5O43304 696 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 PIP5K1CO60331 668 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 HCN1O60741 890 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 CCNB2O95067 398 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 FCGR1AP12314 374 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 CBLP22681 906 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 CHMP24386 653 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 ELK4P28324 431 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 RPS5P46782 204 aaKnown RBP6.94□□□□□ -1.3
SMG1-214ENST00000568038 UGT2B15P54855 530 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 TPD52P55327 224 aaPredicted RBP6.94□□□□□ -1.3
SMG1-214ENST00000568038 DLX5P56178 289 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 CLDN20P56880 219 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 EGR4Q05215 589 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 DGCR6Q14129 220 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 SEC23BQ15437 767 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 ATP6AP1Q15904 470 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 C3AR1Q16581 482 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 KRTCAP3Q53RY4 240 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 SYT14P1Q58G82 188 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 SLC35F1Q5T1Q4 408 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 ZNF324BQ6AW86 544 aaPredicted RBP6.94□□□□□ -1.3
SMG1-214ENST00000568038 VASNQ6EMK4 673 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 TMEM179BQ7Z7N9 219 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 MEX3DQ86XN8 651 aaKnown RBP6.94□□□□□ -1.3
SMG1-214ENST00000568038 GHDCQ8N2G8 530 aa6.94□□□□□ -1.3
SMG1-214ENST00000568038 PQLC1Q8N2U9 271 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms