RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 TMEM231Q9H6L2 316 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 KAT8Q9H7Z6 458 aaKnown RBP2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 NMRK1Q9NWW6 199 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 EURLQ9NYK6 297 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 ATP6V1HQ9UI12 483 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 USP16Q9Y5T5 823 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 NUP98P52948 1817 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 GRIN2DO15399 1336 aa2.65□□□□□ -1.99
HERPUD1-212ENST00000567944 KDM3BQ7LBC6 1761 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 RGSL1A5PLK6 1076 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 GOLGA8IPA6NC78 632 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 KRT87PA6NCN2 255 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 GOLGA8JA6NMD2 632 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 WASHC1A8K0Z3 465 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 CENPBD1B2RD01 187 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 ZNF879B4DU55 563 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 WASH3PC4AMC7 463 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 H3BTX0 84 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 PANO1I0J062 215 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 PDXKO00764 312 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 RAD51BO15315 384 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 SCRG1O75711 98 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 ATP5HO75947 161 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 MT-ATP6P00846 226 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 TGFAP01135 160 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 OPN1LWP04000 364 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 CAPN1P07384 714 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 POLR2MP0CAP2 368 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 RALAP11233 206 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 CTRB1P17538 263 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 ATF6P18850 670 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 CFL1P23528 166 aaKnown RBP2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 RPA1P27694 616 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 CRABP2P29373 138 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 GDI1P31150 447 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 EVI2BP34910 448 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 RABIFP47224 123 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 STARP49675 285 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 TMED10P49755 219 aaKnown RBP2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 SLC26A5P58743 744 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 RAB4BP61018 213 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 PRKCEQ02156 737 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 PLOD1Q02809 727 aaPredicted RBP2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 RFTN1Q14699 578 aaPredicted RBP2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 MOGQ16653 247 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 HADHQ16836 314 aaKnown RBP2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 CCDC58Q4VC31 144 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 ZCWPW2Q504Y3 356 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 TOR1AIP1Q5JTV8 583 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 MEDAGQ5VYS4 303 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 ATL3Q6DD88 541 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 CTRB2Q6GPI1 263 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 RAB12Q6IQ22 244 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 ZCCHC12Q6PEW1 402 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 CXCL17Q6UXB2 119 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 WASH2PQ6VEQ5 465 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 TPGS1Q6ZTW0 290 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 CYS1Q717R9 158 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 MCOLN2Q8IZK6 566 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 SYCE1Q8N0S2 351 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 BPIFB2Q8N4F0 458 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 MRPL43Q8N983 215 aaKnown RBP2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 FAM71CQ8NEG0 241 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 TRPV1Q8NER1 839 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 CDC26Q8NHZ8 85 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 TEX47Q8TBZ9 253 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 RASSF5Q8WWW0 418 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 NELFBQ8WX92 580 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 CYYR1Q96J86 154 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 IFT74Q96LB3 600 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 NOL4LQ96MY1 436 aaPredicted RBP2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 TTC25Q96NG3 672 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 FAM111AQ96PZ2 611 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 PLEKHF1Q96S99 279 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 CCDC77Q9BR77 488 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 TBC1D10AQ9BXI6 508 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 GCOM2Q9BZD3 368 aaPredicted RBP2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 SHCBP1LQ9BZQ2 653 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 C1orf21Q9H246 121 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 ISG20L2Q9H9L3 353 aaKnown RBP2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 ARMC1Q9NVT9 282 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 SOHLH2Q9NX45 425 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 GGA2Q9UJY4 613 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 ANGPTL2Q9UKU9 493 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 PSME2Q9UL46 239 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 FLVCR1Q9Y5Y0 555 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 USH1CQ9Y6N9 552 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 FRMPD4Q14CM0 1322 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 PAPPA2Q9BXP8 1791 aa2.64□□□□□ -1.99
HERPUD1-212ENST00000567944 COL4A5P29400 1685 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 FLT4P35916 1363 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 CARMIL3Q8ND23 1372 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 DOCK3Q8IZD9 2030 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 TRAV6A0A075B6T7 132 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 OR6C74A6NCV1 312 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 FAM231BA6NCW3 169 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 OR7A17O14581 309 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 MAGEB3O15480 346 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 GATCO43716 136 aaKnown RBP2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 KLHL2O95198 593 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms