RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 B3GALT5Q9Y2C3 310 aa18.71■□□□□ 0.59
SHCBP1-205ENST00000566016 BNIP1Q12981 228 aa18.71■□□□□ 0.59
SHCBP1-205ENST00000566016 TRIM25Q14258 630 aaKnown RBP18.71■□□□□ 0.59
SHCBP1-205ENST00000566016 MTX3Q5HYI7 312 aa18.71■□□□□ 0.59
SHCBP1-205ENST00000566016 MEX3BQ6ZN04 569 aaKnown RBP18.71■□□□□ 0.59
SHCBP1-205ENST00000566016 BEND4Q6ZU67 534 aa18.71■□□□□ 0.59
SHCBP1-205ENST00000566016 NUFIP2Q7Z417 695 aaKnown RBP18.71■□□□□ 0.59
SHCBP1-205ENST00000566016 P3H2Q8IVL5 708 aa18.71■□□□□ 0.59
SHCBP1-205ENST00000566016 SLC7A6OSQ96CW6 309 aaPredicted RBP18.71■□□□□ 0.59
SHCBP1-205ENST00000566016 FANCFQ9NPI8 374 aa18.71■□□□□ 0.59
SHCBP1-205ENST00000566016 FLVCR1Q9Y5Y0 555 aa18.71■□□□□ 0.59
SHCBP1-205ENST00000566016 ENPP4Q9Y6X5 453 aa18.71■□□□□ 0.59
SHCBP1-205ENST00000566016 PRSS23O95084 383 aa18.7■□□□□ 0.58
SHCBP1-205ENST00000566016 CNOT4O95628 575 aaKnown RBP18.7■□□□□ 0.58
SHCBP1-205ENST00000566016 BGLAPP02818 100 aa18.7■□□□□ 0.58
SHCBP1-205ENST00000566016 CD79BP40259 229 aa18.7■□□□□ 0.58
SHCBP1-205ENST00000566016 OR3A2P47893 321 aa18.7■□□□□ 0.58
SHCBP1-205ENST00000566016 FAM86B1Q8N7N1 296 aa18.7■□□□□ 0.58
SHCBP1-205ENST00000566016 POP5Q969H6 163 aaKnown RBP18.7■□□□□ 0.58
SHCBP1-205ENST00000566016 SLC25A36Q96CQ1 311 aa18.7■□□□□ 0.58
SHCBP1-205ENST00000566016 ASB9Q96DX5 294 aa18.7■□□□□ 0.58
SHCBP1-205ENST00000566016 PYURFQ96I23 114 aa18.7■□□□□ 0.58
SHCBP1-205ENST00000566016 HS6ST2Q96MM7 605 aa18.7■□□□□ 0.58
SHCBP1-205ENST00000566016 KLHL4Q9C0H6 718 aa18.7■□□□□ 0.58
SHCBP1-205ENST00000566016 C12orf49Q9H741 205 aa18.7■□□□□ 0.58
SHCBP1-205ENST00000566016 LOC102725191A0A1B0GVB3 256 aa18.69■□□□□ 0.58
SHCBP1-205ENST00000566016 HTR3EA5X5Y0 456 aa18.69■□□□□ 0.58
SHCBP1-205ENST00000566016 M0R082 166 aa18.69■□□□□ 0.58
SHCBP1-205ENST00000566016 GYG2O15488 501 aa18.69■□□□□ 0.58
SHCBP1-205ENST00000566016 SEMG1P04279 462 aa18.69■□□□□ 0.58
SHCBP1-205ENST00000566016 GRPRP30550 384 aa18.69■□□□□ 0.58
SHCBP1-205ENST00000566016 HIST2H2BCQ6DN03 193 aa18.69■□□□□ 0.58
SHCBP1-205ENST00000566016 TMEM225Q6GV28 225 aa18.69■□□□□ 0.58
SHCBP1-205ENST00000566016 LCN8Q6JVE9 175 aa18.69■□□□□ 0.58
SHCBP1-205ENST00000566016 H1FNTQ75WM6 255 aaPredicted RBP18.69■□□□□ 0.58
SHCBP1-205ENST00000566016 CYP4Z1Q86W10 505 aa18.69■□□□□ 0.58
SHCBP1-205ENST00000566016 OR9K2Q8NGE7 335 aa18.69■□□□□ 0.58
SHCBP1-205ENST00000566016 ZNF417Q8TAU3 575 aa18.69■□□□□ 0.58
SHCBP1-205ENST00000566016 TMEM45BQ96B21 275 aa18.69■□□□□ 0.58
SHCBP1-205ENST00000566016 C7orf34Q96L11 122 aa18.69■□□□□ 0.58
SHCBP1-205ENST00000566016 ZNF587Q96SQ5 575 aaPredicted RBP18.69■□□□□ 0.58
SHCBP1-205ENST00000566016 ANKRD19PQ9H560 264 aa18.69■□□□□ 0.58
SHCBP1-205ENST00000566016 FKRPQ9H9S5 495 aa18.69■□□□□ 0.58
SHCBP1-205ENST00000566016 MRPL39Q9NYK5 338 aaKnown RBP18.69■□□□□ 0.58
SHCBP1-205ENST00000566016 KCNN3Q9UGI6 736 aa18.69■□□□□ 0.58
SHCBP1-205ENST00000566016 NOSIPQ9Y314 301 aaKnown RBP18.69■□□□□ 0.58
SHCBP1-205ENST00000566016 APCP25054 2843 aa18.69■□□□□ 0.58
SHCBP1-205ENST00000566016 ABCA4P78363 2273 aa18.69■□□□□ 0.58
SHCBP1-205ENST00000566016 NOTCH2Q04721 2471 aa18.68■□□□□ 0.58
SHCBP1-205ENST00000566016 CACNA1DQ01668 2161 aa18.68■□□□□ 0.58
SHCBP1-205ENST00000566016 ALPK2Q86TB3 2170 aa18.68■□□□□ 0.58
SHCBP1-205ENST00000566016 FFAR1O14842 300 aa18.68■□□□□ 0.58
SHCBP1-205ENST00000566016 MT-ND1P03886 318 aa18.68■□□□□ 0.58
SHCBP1-205ENST00000566016 POU2F1P14859 743 aa18.68■□□□□ 0.58
SHCBP1-205ENST00000566016 ZNF74Q16587 644 aa18.68■□□□□ 0.58
SHCBP1-205ENST00000566016 TSEN54Q7Z6J9 526 aaKnown RBP18.68■□□□□ 0.58
SHCBP1-205ENST00000566016 NKAIN4Q8IVV8 208 aa18.68■□□□□ 0.58
SHCBP1-205ENST00000566016 TMEM239Q8WW34 195 aa18.68■□□□□ 0.58
SHCBP1-205ENST00000566016 MOGAT1Q96PD6 335 aa18.68■□□□□ 0.58
SHCBP1-205ENST00000566016 BTBD10Q9BSF8 475 aa18.68■□□□□ 0.58
SHCBP1-205ENST00000566016 ASPNQ9BXN1 380 aa18.68■□□□□ 0.58
SHCBP1-205ENST00000566016 MEPEQ9NQ76 525 aaPredicted RBP18.68■□□□□ 0.58
SHCBP1-205ENST00000566016 MAN2C1Q9NTJ4 1040 aa18.68■□□□□ 0.58
SHCBP1-205ENST00000566016 PARPBPQ9NWS1 579 aa18.68■□□□□ 0.58
SHCBP1-205ENST00000566016 NDUFAF4Q9P032 175 aa18.68■□□□□ 0.58
SHCBP1-205ENST00000566016 C6orf203Q9P0P8 240 aaPredicted RBP18.68■□□□□ 0.58
SHCBP1-205ENST00000566016 TACC2O95359 2948 aa18.67■□□□□ 0.58
SHCBP1-205ENST00000566016 ATP5HO75947 161 aa18.67■□□□□ 0.58
SHCBP1-205ENST00000566016 PDE5AO76074 875 aa18.67■□□□□ 0.58
SHCBP1-205ENST00000566016 ITGA2P17301 1181 aa18.67■□□□□ 0.58
SHCBP1-205ENST00000566016 RHCEP18577 417 aa18.67■□□□□ 0.58
SHCBP1-205ENST00000566016 PTNP21246 168 aa18.67■□□□□ 0.58
SHCBP1-205ENST00000566016 RASSF2P50749 326 aa18.67■□□□□ 0.58
SHCBP1-205ENST00000566016 LTBQ06643 244 aa18.67■□□□□ 0.58
SHCBP1-205ENST00000566016 TRAM2Q15035 370 aa18.67■□□□□ 0.58
SHCBP1-205ENST00000566016 ZNF787Q6DD87 383 aa18.67■□□□□ 0.58
SHCBP1-205ENST00000566016 Q6ZT83 130 aa18.67■□□□□ 0.58
SHCBP1-205ENST00000566016 GPAT4Q86UL3 456 aa18.67■□□□□ 0.58
SHCBP1-205ENST00000566016 GABRG1Q8N1C3 465 aa18.67■□□□□ 0.58
SHCBP1-205ENST00000566016 TMEM255BQ8WV15 326 aa18.67■□□□□ 0.58
SHCBP1-205ENST00000566016 MARVELD3Q96A59 401 aa18.67■□□□□ 0.58
SHCBP1-205ENST00000566016 APH1AQ96BI3 265 aa18.67■□□□□ 0.58
SHCBP1-205ENST00000566016 THTPAQ9BU02 230 aa18.67■□□□□ 0.58
SHCBP1-205ENST00000566016 FNDC11Q9BVV2 318 aa18.67■□□□□ 0.58
SHCBP1-205ENST00000566016 B3GAT1Q9P2W7 334 aa18.67■□□□□ 0.58
SHCBP1-205ENST00000566016 ZNF229Q9UJW7 825 aa18.67■□□□□ 0.58
SHCBP1-205ENST00000566016 J3KTA2 159 aa18.66■□□□□ 0.58
SHCBP1-205ENST00000566016 MRPL33O75394 65 aaKnown RBP18.66■□□□□ 0.58
SHCBP1-205ENST00000566016 PSMB1P20618 241 aaKnown RBP18.66■□□□□ 0.58
SHCBP1-205ENST00000566016 ATP6V1B2P21281 511 aa18.66■□□□□ 0.58
SHCBP1-205ENST00000566016 CCKARP32238 428 aa18.66■□□□□ 0.58
SHCBP1-205ENST00000566016 UGT2B10P36537 528 aa18.66■□□□□ 0.58
SHCBP1-205ENST00000566016 VLDLRP98155 873 aa18.66■□□□□ 0.58
SHCBP1-205ENST00000566016 DHFR2Q86XF0 187 aa18.66■□□□□ 0.58
SHCBP1-205ENST00000566016 ZIC4Q8N9L1 334 aa18.66■□□□□ 0.58
SHCBP1-205ENST00000566016 OXGR1Q96P68 337 aa18.66■□□□□ 0.58
SHCBP1-205ENST00000566016 SEC14L4Q9UDX3 406 aa18.66■□□□□ 0.58
SHCBP1-205ENST00000566016 MALT1Q9UDY8 824 aa18.66■□□□□ 0.58
SHCBP1-205ENST00000566016 MED31Q9Y3C7 131 aa18.66■□□□□ 0.58
SHCBP1-205ENST00000566016 FAM32AQ9Y421 112 aaKnown RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms