RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 NDUFAB1O14561 156 aa11.06□□□□□ -0.64
RNF40-208ENST00000565995 KCNAB3O43448 404 aa11.06□□□□□ -0.64
RNF40-208ENST00000565995 BCAS1O75363 584 aaPredicted RBP11.06□□□□□ -0.64
RNF40-208ENST00000565995 IGFBP1P08833 259 aaPredicted RBP11.06□□□□□ -0.64
RNF40-208ENST00000565995 HOXB1P14653 301 aaPredicted RBP11.06□□□□□ -0.64
RNF40-208ENST00000565995 PRPS1L1P21108 318 aa11.06□□□□□ -0.64
RNF40-208ENST00000565995 APEX1P27695 318 aaKnown RBP11.06□□□□□ -0.64
RNF40-208ENST00000565995 ARFIP2P53365 341 aa11.06□□□□□ -0.64
RNF40-208ENST00000565995 KCNJ10P78508 379 aa11.06□□□□□ -0.64
RNF40-208ENST00000565995 NAAAQ02083 359 aa11.06□□□□□ -0.64
RNF40-208ENST00000565995 PTGR1Q14914 329 aa11.06□□□□□ -0.64
RNF40-208ENST00000565995 TBRG1Q3YBR2 411 aa11.06□□□□□ -0.64
RNF40-208ENST00000565995 HIKESHIQ53FT3 197 aa11.06□□□□□ -0.64
RNF40-208ENST00000565995 CGB2Q6NT52 195 aa11.06□□□□□ -0.64
RNF40-208ENST00000565995 KLHL24Q6TFL4 600 aa11.06□□□□□ -0.64
RNF40-208ENST00000565995 ABHD12BQ7Z5M8 362 aaPredicted RBP11.06□□□□□ -0.64
RNF40-208ENST00000565995 OR1K1Q8NGR3 316 aa11.06□□□□□ -0.64
RNF40-208ENST00000565995 OR5AK3PQ8NH89 298 aa11.06□□□□□ -0.64
RNF40-208ENST00000565995 ZNF563Q8TA94 476 aa11.06□□□□□ -0.64
RNF40-208ENST00000565995 FAM216AQ8WUB2 273 aa11.06□□□□□ -0.64
RNF40-208ENST00000565995 BCL2L2Q92843 193 aaPredicted RBP11.06□□□□□ -0.64
RNF40-208ENST00000565995 TUBGCP3Q96CW5 907 aa11.06□□□□□ -0.64
RNF40-208ENST00000565995 DDIT4LQ96D03 193 aa11.06□□□□□ -0.64
RNF40-208ENST00000565995 DUSP26Q9BV47 211 aa11.06□□□□□ -0.64
RNF40-208ENST00000565995 EXD2Q9NVH0 621 aa11.06□□□□□ -0.64
RNF40-208ENST00000565995 TMEM45AQ9NWC5 275 aa11.06□□□□□ -0.64
RNF40-208ENST00000565995 TMED7Q9Y3B3 224 aa11.06□□□□□ -0.64
RNF40-208ENST00000565995 B4DSR2 109 aa11.05□□□□□ -0.64
RNF40-208ENST00000565995 FAM107AO95990 144 aa11.05□□□□□ -0.64
RNF40-208ENST00000565995 AGR2O95994 175 aa11.05□□□□□ -0.64
RNF40-208ENST00000565995 IGKV3-15P01624 115 aa11.05□□□□□ -0.64
RNF40-208ENST00000565995 EPHA3P29320 983 aa11.05□□□□□ -0.64
RNF40-208ENST00000565995 CALCRP30988 508 aa11.05□□□□□ -0.64
RNF40-208ENST00000565995 RPS26P62854 115 aaKnown RBP11.05□□□□□ -0.64
RNF40-208ENST00000565995 HGFACQ04756 655 aa11.05□□□□□ -0.64
RNF40-208ENST00000565995 SLC9B1Q4ZJI4 515 aa11.05□□□□□ -0.64
RNF40-208ENST00000565995 ATP6AP1LQ52LC2 224 aa11.05□□□□□ -0.64
RNF40-208ENST00000565995 C6orf136Q5SQH8 315 aa11.05□□□□□ -0.64
RNF40-208ENST00000565995 GKAP1Q5VSY0 366 aaPredicted RBP11.05□□□□□ -0.64
RNF40-208ENST00000565995 USP43Q70EL4 1123 aa11.05□□□□□ -0.64
RNF40-208ENST00000565995 OLIG3Q7RTU3 272 aa11.05□□□□□ -0.64
RNF40-208ENST00000565995 MAVSQ7Z434 540 aa11.05□□□□□ -0.64
RNF40-208ENST00000565995 SPATA19Q7Z5L4 167 aa11.05□□□□□ -0.64
RNF40-208ENST00000565995 KRTCAP2Q8N6L1 136 aa11.05□□□□□ -0.64
RNF40-208ENST00000565995 OR9K2Q8NGE7 335 aa11.05□□□□□ -0.64
RNF40-208ENST00000565995 BCAS4Q8TDM0 211 aa11.05□□□□□ -0.64
RNF40-208ENST00000565995 UBASH3BQ8TF42 649 aa11.05□□□□□ -0.64
RNF40-208ENST00000565995 ZG16BQ96DA0 208 aa11.05□□□□□ -0.64
RNF40-208ENST00000565995 ZNF385AQ96PM9 386 aaKnown RBP11.05□□□□□ -0.64
RNF40-208ENST00000565995 CCT8L2Q96SF2 557 aa11.05□□□□□ -0.64
RNF40-208ENST00000565995 KCNS3Q9BQ31 491 aa11.05□□□□□ -0.64
RNF40-208ENST00000565995 WDR55Q9H6Y2 383 aaPredicted RBP11.05□□□□□ -0.64
RNF40-208ENST00000565995 MEAF6Q9HAF1 191 aa11.05□□□□□ -0.64
RNF40-208ENST00000565995 OSGIN1Q9UJX0 560 aa11.05□□□□□ -0.64
RNF40-208ENST00000565995 ARHGAP32A7KAX9 2087 aa11.04□□□□□ -0.64
RNF40-208ENST00000565995 TMEM72A0PK05 275 aa11.04□□□□□ -0.64
RNF40-208ENST00000565995 OR6C65A6NJZ3 312 aa11.04□□□□□ -0.64
RNF40-208ENST00000565995 VSTM5A8MXK1 200 aa11.04□□□□□ -0.64
RNF40-208ENST00000565995 FAM157AC9JC47 383 aa11.04□□□□□ -0.64
RNF40-208ENST00000565995 SDHDO14521 159 aa11.04□□□□□ -0.64
RNF40-208ENST00000565995 CFLARO15519 480 aa11.04□□□□□ -0.64
RNF40-208ENST00000565995 PEX11AO75192 247 aa11.04□□□□□ -0.64
RNF40-208ENST00000565995 ERCC1P07992 297 aaPredicted RBP11.04□□□□□ -0.64
RNF40-208ENST00000565995 CECR9P0C854 216 aa11.04□□□□□ -0.64
RNF40-208ENST00000565995 RYKP34925 604 aa11.04□□□□□ -0.64
RNF40-208ENST00000565995 SLC1A3P43003 542 aa11.04□□□□□ -0.64
RNF40-208ENST00000565995 IDH2P48735 452 aaKnown RBP11.04□□□□□ -0.64
RNF40-208ENST00000565995 IDH3AP50213 366 aa11.04□□□□□ -0.64
RNF40-208ENST00000565995 POLR2HP52434 150 aaKnown RBP11.04□□□□□ -0.64
RNF40-208ENST00000565995 SCGB2A2Q13296 93 aa11.04□□□□□ -0.64
RNF40-208ENST00000565995 IL23RQ5VWK5 629 aa11.04□□□□□ -0.64
RNF40-208ENST00000565995 EPGNQ6UW88 154 aa11.04□□□□□ -0.64
RNF40-208ENST00000565995 FRRS1Q6ZNA5 592 aa11.04□□□□□ -0.64
RNF40-208ENST00000565995 AAED1Q7RTV5 226 aa11.04□□□□□ -0.64
RNF40-208ENST00000565995 C16orf62Q7Z3J2 963 aa11.04□□□□□ -0.64
RNF40-208ENST00000565995 CMIPQ8IY22 773 aa11.04□□□□□ -0.64
RNF40-208ENST00000565995 ANKK1Q8NFD2 765 aa11.04□□□□□ -0.64
RNF40-208ENST00000565995 WDR60Q8WVS4 1066 aa11.04□□□□□ -0.64
RNF40-208ENST00000565995 DNAJA3Q96EY1 480 aa11.04□□□□□ -0.64
RNF40-208ENST00000565995 AURKBQ96GD4 344 aaPredicted RBP11.04□□□□□ -0.64
RNF40-208ENST00000565995 C3orf30Q96M34 536 aa11.04□□□□□ -0.64
RNF40-208ENST00000565995 ANKRD27Q96NW4 1050 aa11.04□□□□□ -0.64
RNF40-208ENST00000565995 SNX18Q96RF0 628 aa11.04□□□□□ -0.64
RNF40-208ENST00000565995 EBF4Q9BQW3 602 aa11.04□□□□□ -0.64
RNF40-208ENST00000565995 RACGAP1Q9H0H5 632 aa11.04□□□□□ -0.64
RNF40-208ENST00000565995 OR51I1Q9H343 314 aa11.04□□□□□ -0.64
RNF40-208ENST00000565995 NELFAQ9H3P2 528 aa11.04□□□□□ -0.64
RNF40-208ENST00000565995 TCF7L2Q9NQB0 619 aa11.04□□□□□ -0.64
RNF40-208ENST00000565995 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.04□□□□□ -0.64
RNF40-208ENST00000565995 GIMAP2Q9UG22 337 aa11.04□□□□□ -0.64
RNF40-208ENST00000565995 WDR45Q9Y484 360 aa11.04□□□□□ -0.64
RNF40-208ENST00000565995 SPEF1Q9Y4P9 236 aa11.04□□□□□ -0.64
RNF40-208ENST00000565995 LIPT2A6NK58 231 aa11.03□□□□□ -0.64
RNF40-208ENST00000565995 AQP7P3A6NL99 342 aa11.03□□□□□ -0.64
RNF40-208ENST00000565995 E9PBE3 544 aa11.03□□□□□ -0.64
RNF40-208ENST00000565995 RPL36A-HNRNPH2H7BZ11 118 aa11.03□□□□□ -0.64
RNF40-208ENST00000565995 hCG_2039718K7EN88 272 aa11.03□□□□□ -0.64
RNF40-208ENST00000565995 RNASET2O00584 256 aaKnown RBP11.03□□□□□ -0.64
RNF40-208ENST00000565995 SNX3O60493 162 aa11.03□□□□□ -0.64
RNF40-208ENST00000565995 SCN2BO60939 215 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms