RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 HPF1Q9NWY4 346 aa18.82■□□□□ 0.6
MAP1LC3B-206ENST00000564844 TAS2R5Q9NYW4 299 aa18.82■□□□□ 0.6
MAP1LC3B-206ENST00000564844 MED11Q9P086 117 aa18.82■□□□□ 0.6
MAP1LC3B-206ENST00000564844 RNF215Q9Y6U7 377 aa18.82■□□□□ 0.6
MAP1LC3B-206ENST00000564844 UBE2QL1A1L167 161 aa18.82■□□□□ 0.6
MAP1LC3B-206ENST00000564844 HIST1H2ABP04908 130 aa18.82■□□□□ 0.6
MAP1LC3B-206ENST00000564844 OR8G3PP0DMU2 310 aa18.82■□□□□ 0.6
MAP1LC3B-206ENST00000564844 CLVS2Q5SYC1 327 aa18.82■□□□□ 0.6
MAP1LC3B-206ENST00000564844 ZNF626Q68DY1 528 aa18.82■□□□□ 0.6
MAP1LC3B-206ENST00000564844 HIST3H2AQ7L7L0 130 aa18.82■□□□□ 0.6
MAP1LC3B-206ENST00000564844 LINC00518Q8N0U6 118 aa18.82■□□□□ 0.6
MAP1LC3B-206ENST00000564844 OR51S1Q8NGJ8 323 aa18.82■□□□□ 0.6
MAP1LC3B-206ENST00000564844 SFXN5Q8TD22 340 aa18.82■□□□□ 0.6
MAP1LC3B-206ENST00000564844 HIST1H2ACQ93077 130 aa18.82■□□□□ 0.6
MAP1LC3B-206ENST00000564844 RASD2Q96D21 266 aa18.82■□□□□ 0.6
MAP1LC3B-206ENST00000564844 C7orf50Q9BRJ6 194 aaKnown RBP18.82■□□□□ 0.6
MAP1LC3B-206ENST00000564844 ZMAT3Q9HA38 289 aaKnown RBP18.82■□□□□ 0.6
MAP1LC3B-206ENST00000564844 CHD9Q3L8U1 2897 aa18.82■□□□□ 0.6
MAP1LC3B-206ENST00000564844 OR2M5A3KFT3 312 aa18.82■□□□□ 0.6
MAP1LC3B-206ENST00000564844 GRXCR1A8MXD5 290 aa18.82■□□□□ 0.6
MAP1LC3B-206ENST00000564844 D6RAR5 112 aa18.82■□□□□ 0.6
MAP1LC3B-206ENST00000564844 MCIDASD6RGH6 385 aa18.82■□□□□ 0.6
MAP1LC3B-206ENST00000564844 SERPINA3P01011 423 aa18.82■□□□□ 0.6
MAP1LC3B-206ENST00000564844 IKZF1Q13422 519 aa18.82■□□□□ 0.6
MAP1LC3B-206ENST00000564844 TRAM1Q15629 374 aa18.82■□□□□ 0.6
MAP1LC3B-206ENST00000564844 AMZ1Q400G9 498 aa18.82■□□□□ 0.6
MAP1LC3B-206ENST00000564844 SEZ6L2Q6UXD5 910 aa18.82■□□□□ 0.6
MAP1LC3B-206ENST00000564844 OR52E1Q8NGJ3 308 aa18.82■□□□□ 0.6
MAP1LC3B-206ENST00000564844 DPYSL5Q9BPU6 564 aa18.82■□□□□ 0.6
MAP1LC3B-206ENST00000564844 TRPV4Q9HBA0 871 aa18.82■□□□□ 0.6
MAP1LC3B-206ENST00000564844 ZNF304Q9HCX3 659 aa18.82■□□□□ 0.6
MAP1LC3B-206ENST00000564844 ADAM29Q9UKF5 820 aa18.82■□□□□ 0.6
MAP1LC3B-206ENST00000564844 FOXJ3Q9UPW0 622 aa18.82■□□□□ 0.6
MAP1LC3B-206ENST00000564844 V9GY05 133 aa18.82■□□□□ 0.6
MAP1LC3B-206ENST00000564844 MPDZO75970 2070 aa18.82■□□□□ 0.6
MAP1LC3B-206ENST00000564844 TRAV1-2A0A0B4J238 106 aa18.81■□□□□ 0.6
MAP1LC3B-206ENST00000564844 PRICKLE3O43900 615 aaPredicted RBP18.81■□□□□ 0.6
MAP1LC3B-206ENST00000564844 FGF2P09038 288 aa18.81■□□□□ 0.6
MAP1LC3B-206ENST00000564844 DPP4P27487 766 aa18.81■□□□□ 0.6
MAP1LC3B-206ENST00000564844 CDK3Q00526 305 aa18.81■□□□□ 0.6
MAP1LC3B-206ENST00000564844 ZNF169Q14929 603 aaPredicted RBP18.81■□□□□ 0.6
MAP1LC3B-206ENST00000564844 C12orf76Q8N812 135 aaPredicted RBP18.81■□□□□ 0.6
MAP1LC3B-206ENST00000564844 OR4C16Q8NGL9 310 aa18.81■□□□□ 0.6
MAP1LC3B-206ENST00000564844 SEC22AQ96IW7 307 aa18.81■□□□□ 0.6
MAP1LC3B-206ENST00000564844 Q96M85 177 aa18.81■□□□□ 0.6
MAP1LC3B-206ENST00000564844 FOXN4Q96NZ1 517 aa18.81■□□□□ 0.6
MAP1LC3B-206ENST00000564844 TMEM185BQ9H7F4 350 aa18.81■□□□□ 0.6
MAP1LC3B-206ENST00000564844 TSPAN11A1L157 253 aa18.81■□□□□ 0.6
MAP1LC3B-206ENST00000564844 AIPO00170 330 aa18.81■□□□□ 0.6
MAP1LC3B-206ENST00000564844 GMFGO60234 142 aa18.81■□□□□ 0.6
MAP1LC3B-206ENST00000564844 PRAF2O60831 178 aa18.81■□□□□ 0.6
MAP1LC3B-206ENST00000564844 PRNPP04156 253 aa18.81■□□□□ 0.6
MAP1LC3B-206ENST00000564844 RPN2P04844 631 aa18.81■□□□□ 0.6
MAP1LC3B-206ENST00000564844 RHOP08100 348 aa18.81■□□□□ 0.6
MAP1LC3B-206ENST00000564844 CPMP14384 443 aa18.81■□□□□ 0.6
MAP1LC3B-206ENST00000564844 ART1P52961 327 aa18.81■□□□□ 0.6
MAP1LC3B-206ENST00000564844 EEF1A1P68104 462 aaKnown RBP18.81■□□□□ 0.6
MAP1LC3B-206ENST00000564844 DHCR24Q15392 516 aa18.81■□□□□ 0.6
MAP1LC3B-206ENST00000564844 PWWP2BQ6NUJ5 590 aa18.81■□□□□ 0.6
MAP1LC3B-206ENST00000564844 OR10AC1Q8NH08 325 aa18.81■□□□□ 0.6
MAP1LC3B-206ENST00000564844 LINC00615Q96LM1 132 aaPredicted RBP18.81■□□□□ 0.6
MAP1LC3B-206ENST00000564844 ZNF75AQ96N20 296 aa18.81■□□□□ 0.6
MAP1LC3B-206ENST00000564844 NCDNQ9UBB6 729 aa18.81■□□□□ 0.6
MAP1LC3B-206ENST00000564844 DNASE2O00115 360 aaPredicted RBP18.8■□□□□ 0.6
MAP1LC3B-206ENST00000564844 CCSO14618 274 aa18.8■□□□□ 0.6
MAP1LC3B-206ENST00000564844 GSTZ1O43708 216 aaPredicted RBP18.8■□□□□ 0.6
MAP1LC3B-206ENST00000564844 CSF2RAP15509 400 aa18.8■□□□□ 0.6
MAP1LC3B-206ENST00000564844 PPP3CBP16298 524 aa18.8■□□□□ 0.6
MAP1LC3B-206ENST00000564844 GABRA3P34903 492 aa18.8■□□□□ 0.6
MAP1LC3B-206ENST00000564844 TAS2R20P59543 309 aa18.8■□□□□ 0.6
MAP1LC3B-206ENST00000564844 AP3S2P59780 193 aa18.8■□□□□ 0.6
MAP1LC3B-206ENST00000564844 LIN54Q6MZP7 749 aa18.8■□□□□ 0.6
MAP1LC3B-206ENST00000564844 OVCH2Q7RTZ1 564 aa18.8■□□□□ 0.6
MAP1LC3B-206ENST00000564844 CNN2Q99439 309 aaKnown RBP18.8■□□□□ 0.6
MAP1LC3B-206ENST00000564844 TCF7L1Q9HCS4 588 aa18.8■□□□□ 0.6
MAP1LC3B-206ENST00000564844 GTF2A1LQ9UNN4 478 aa18.8■□□□□ 0.6
MAP1LC3B-206ENST00000564844 CFAP54Q96N23 3096 aa18.8■□□□□ 0.6
MAP1LC3B-206ENST00000564844 OTOL1A6NHN0 477 aaPredicted RBP18.8■□□□□ 0.6
MAP1LC3B-206ENST00000564844 F5H5P2 479 aa18.8■□□□□ 0.6
MAP1LC3B-206ENST00000564844 SLC2A5P22732 501 aa18.8■□□□□ 0.6
MAP1LC3B-206ENST00000564844 VASPP50552 380 aaPredicted RBP18.8■□□□□ 0.6
MAP1LC3B-206ENST00000564844 RAB28P51157 221 aa18.8■□□□□ 0.6
MAP1LC3B-206ENST00000564844 EFNB2P52799 333 aa18.8■□□□□ 0.6
MAP1LC3B-206ENST00000564844 MC2RQ01718 297 aa18.8■□□□□ 0.6
MAP1LC3B-206ENST00000564844 RNF44Q7L0R7 432 aa18.8■□□□□ 0.6
MAP1LC3B-206ENST00000564844 GLB1L2Q8IW92 636 aa18.8■□□□□ 0.6
MAP1LC3B-206ENST00000564844 LRRC25Q8N386 305 aaPredicted RBP18.8■□□□□ 0.6
MAP1LC3B-206ENST00000564844 FAM71CQ8NEG0 241 aa18.8■□□□□ 0.6
MAP1LC3B-206ENST00000564844 JAM3Q9BX67 310 aa18.8■□□□□ 0.6
MAP1LC3B-206ENST00000564844 ANKRD20A5PA0PJZ0 165 aa18.8■□□□□ 0.6
MAP1LC3B-206ENST00000564844 VEGFDO43915 354 aa18.8■□□□□ 0.6
MAP1LC3B-206ENST00000564844 DOK2O60496 412 aa18.8■□□□□ 0.6
MAP1LC3B-206ENST00000564844 F12P00748 615 aaPredicted RBP18.8■□□□□ 0.6
MAP1LC3B-206ENST00000564844 PPP2CBP62714 309 aa18.8■□□□□ 0.6
MAP1LC3B-206ENST00000564844 PPP2CAP67775 309 aa18.8■□□□□ 0.6
MAP1LC3B-206ENST00000564844 HTRA3P83110 453 aa18.8■□□□□ 0.6
MAP1LC3B-206ENST00000564844 BAMBIQ13145 260 aa18.8■□□□□ 0.6
MAP1LC3B-206ENST00000564844 DCST2Q5T1A1 773 aa18.8■□□□□ 0.6
MAP1LC3B-206ENST00000564844 B3GNTL1Q67FW5 361 aaPredicted RBP18.8■□□□□ 0.6
MAP1LC3B-206ENST00000564844 RGP1Q92546 391 aaPredicted RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms