RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 APOBEC1P41238 236 aaKnown RBP6.96□□□□□ -1.29
TCF4-216ENST00000562680 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.96□□□□□ -1.29
TCF4-216ENST00000562680 GLT8D1Q68CQ7 371 aa6.96□□□□□ -1.29
TCF4-216ENST00000562680 KDM4DQ6B0I6 523 aa6.96□□□□□ -1.29
TCF4-216ENST00000562680 UGT2A3Q6UWM9 527 aa6.96□□□□□ -1.29
TCF4-216ENST00000562680 IL20RBQ6UXL0 311 aa6.96□□□□□ -1.29
TCF4-216ENST00000562680 GDF7Q7Z4P5 450 aa6.96□□□□□ -1.29
TCF4-216ENST00000562680 GHDCQ8N2G8 530 aa6.96□□□□□ -1.29
TCF4-216ENST00000562680 CHDHQ8NE62 594 aaPredicted RBP6.96□□□□□ -1.29
TCF4-216ENST00000562680 C16orf52Q8NHV5 167 aa6.96□□□□□ -1.29
TCF4-216ENST00000562680 C10orf90Q96M02 699 aa6.96□□□□□ -1.29
TCF4-216ENST00000562680 OR5B2Q96R09 309 aa6.96□□□□□ -1.29
TCF4-216ENST00000562680 AMBRA1Q9C0C7 1298 aa6.96□□□□□ -1.29
TCF4-216ENST00000562680 CABIN1Q9Y6J0 2220 aa6.96□□□□□ -1.29
TCF4-216ENST00000562680 TRBV4-1A0A0J9YWV2 114 aa6.96□□□□□ -1.3
TCF4-216ENST00000562680 MEGF11A6BM72 1044 aa6.96□□□□□ -1.3
TCF4-216ENST00000562680 KLRC4-KLRK1H3BQV0 150 aa6.96□□□□□ -1.3
TCF4-216ENST00000562680 BMP1P13497 986 aa6.96□□□□□ -1.3
TCF4-216ENST00000562680 ACVR1BP36896 505 aa6.96□□□□□ -1.3
TCF4-216ENST00000562680 CYB561P49447 251 aa6.96□□□□□ -1.3
TCF4-216ENST00000562680 MEOX2P50222 304 aa6.96□□□□□ -1.3
TCF4-216ENST00000562680 SLC3A1Q07837 685 aa6.96□□□□□ -1.3
TCF4-216ENST00000562680 IL18Q14116 193 aa6.96□□□□□ -1.3
TCF4-216ENST00000562680 SHEQ5VZ18 495 aa6.96□□□□□ -1.3
TCF4-216ENST00000562680 C12orf45Q8N5I9 185 aaPredicted RBP6.96□□□□□ -1.3
TCF4-216ENST00000562680 NANPQ8TBE9 248 aa6.96□□□□□ -1.3
TCF4-216ENST00000562680 ZNF431Q8TF32 576 aaPredicted RBP6.96□□□□□ -1.3
TCF4-216ENST00000562680 ACOT12Q8WYK0 555 aa6.96□□□□□ -1.3
TCF4-216ENST00000562680 C11orf24Q96F05 449 aaPredicted RBP6.96□□□□□ -1.3
TCF4-216ENST00000562680 PIGQQ9BRB3 760 aa6.96□□□□□ -1.3
TCF4-216ENST00000562680 SEC22CQ9BRL7 303 aa6.96□□□□□ -1.3
TCF4-216ENST00000562680 MRI1Q9BV20 369 aa6.96□□□□□ -1.3
TCF4-216ENST00000562680 SRA1Q9HD15 236 aaKnown RBP6.96□□□□□ -1.3
TCF4-216ENST00000562680 REV1Q9UBZ9 1251 aa6.96□□□□□ -1.3
TCF4-216ENST00000562680 STUB1Q9UNE7 303 aa6.96□□□□□ -1.3
TCF4-216ENST00000562680 MRPS2Q9Y399 296 aaKnown RBP6.96□□□□□ -1.3
TCF4-216ENST00000562680 TMED7-TICAM2A0A0A6YYA0 188 aa6.96□□□□□ -1.3
TCF4-216ENST00000562680 RPP14O95059 124 aaKnown RBP6.96□□□□□ -1.3
TCF4-216ENST00000562680 TP53P04637 393 aaPredicted RBP6.96□□□□□ -1.3
TCF4-216ENST00000562680 POU3F2P20265 443 aaPredicted RBP6.96□□□□□ -1.3
TCF4-216ENST00000562680 GDF1P27539 372 aa6.96□□□□□ -1.3
TCF4-216ENST00000562680 OR12D2P58182 307 aa6.96□□□□□ -1.3
TCF4-216ENST00000562680 RELQ04864 619 aaPredicted RBP6.96□□□□□ -1.3
TCF4-216ENST00000562680 FOXB2Q5VYV0 432 aa6.96□□□□□ -1.3
TCF4-216ENST00000562680 BAIAP2L2Q6UXY1 529 aa6.96□□□□□ -1.3
TCF4-216ENST00000562680 DPY19L2P2Q6ZN68 376 aa6.96□□□□□ -1.3
TCF4-216ENST00000562680 FTMTQ8N4E7 242 aa6.96□□□□□ -1.3
TCF4-216ENST00000562680 ZNF283Q8N7M2 679 aa6.96□□□□□ -1.3
TCF4-216ENST00000562680 NUDT22Q9BRQ3 303 aa6.96□□□□□ -1.3
TCF4-216ENST00000562680 MED28Q9H204 178 aa6.96□□□□□ -1.3
TCF4-216ENST00000562680 ZNF768Q9H5H4 540 aaKnown RBP6.96□□□□□ -1.3
TCF4-216ENST00000562680 PARPBPQ9NWS1 579 aa6.96□□□□□ -1.3
TCF4-216ENST00000562680 MBD1Q9UIS9 605 aaPredicted RBP6.96□□□□□ -1.3
TCF4-216ENST00000562680 VDAC3Q9Y277 283 aa6.96□□□□□ -1.3
TCF4-216ENST00000562680 TMED7Q9Y3B3 224 aa6.96□□□□□ -1.3
TCF4-216ENST00000562680 A0A087WZY1 265 aa6.96□□□□□ -1.3
TCF4-216ENST00000562680 GPR171O14626 319 aa6.96□□□□□ -1.3
TCF4-216ENST00000562680 TO15178 435 aa6.96□□□□□ -1.3
TCF4-216ENST00000562680 MT-CO3P00414 261 aa6.96□□□□□ -1.3
TCF4-216ENST00000562680 ACP2P11117 423 aa6.96□□□□□ -1.3
TCF4-216ENST00000562680 PEPDP12955 493 aa6.96□□□□□ -1.3
TCF4-216ENST00000562680 ZNF14P17017 642 aaPredicted RBP6.96□□□□□ -1.3
TCF4-216ENST00000562680 PYCR1P32322 319 aa6.96□□□□□ -1.3
TCF4-216ENST00000562680 PRTGQ2VWP7 1150 aa6.96□□□□□ -1.3
TCF4-216ENST00000562680 BCORP1Q8N888 145 aa6.96□□□□□ -1.3
TCF4-216ENST00000562680 DUSP19Q8WTR2 217 aa6.96□□□□□ -1.3
TCF4-216ENST00000562680 ASB17Q8WXJ9 295 aa6.96□□□□□ -1.3
TCF4-216ENST00000562680 ZNF350Q9GZX5 532 aa6.96□□□□□ -1.3
TCF4-216ENST00000562680 NKIRAS2Q9NYR9 191 aa6.96□□□□□ -1.3
TCF4-216ENST00000562680 FKBP7Q9Y680 259 aa6.96□□□□□ -1.3
TCF4-216ENST00000562680 IGHV5-51A0A0C4DH38 117 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 FABP12A6NFH5 140 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 HMGB3O15347 200 aaKnown RBP6.95□□□□□ -1.3
TCF4-216ENST00000562680 SUSD5O60279 629 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 CSO75390 466 aaKnown RBP6.95□□□□□ -1.3
TCF4-216ENST00000562680 VAMP5O95183 116 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 IGHG1P01857 330 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 APOC3P02656 99 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 IFNA4P05014 189 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 GADD45AP24522 165 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 TGFBR2P37173 567 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 SLC1A3P43003 542 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 FAM69AQ5T7M9 428 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 LIN54Q6MZP7 749 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 MEPCEQ7L2J0 689 aaKnown RBP6.95□□□□□ -1.3
TCF4-216ENST00000562680 IGFN1Q86VF2 1251 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 OR1N1Q8NGS0 311 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 TXNDC15Q96J42 360 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 CHRNA10Q9GZZ6 450 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 COMMD9Q9P000 198 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 ATG2BQ96BY7 2078 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 PLXNA3P51805 1871 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 P2RX6O15547 441 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 CD14P08571 375 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 DPP4P27487 766 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 DAPP51397 102 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 NUBP1P53384 320 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 SELENOVP59797 346 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 BPIFB3P59826 476 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 MXD1Q05195 221 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms