RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 OXSR1O95747 527 aaPredicted RBP3.79□□□□□ -1.8
SPG11-211ENST00000558561 ANGPTL1O95841 491 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 EDNRAP25101 427 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 PSMA4P25789 261 aaKnown RBP3.79□□□□□ -1.8
SPG11-211ENST00000558561 DPP4P27487 766 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 EVI2BP34910 448 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 SLC6A8P48029 635 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 SOX2P48431 317 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 LHX2P50458 406 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 ZNF136P52737 540 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 MVDP53602 400 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 CLDN18P56856 261 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 NAA20P61599 178 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 DCAF7P61962 342 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 TFF3Q07654 80 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 SNTA1Q13424 505 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 SELPLGQ14242 412 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 GPR68Q15743 365 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 INAQ16352 499 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 SYPL1Q16563 259 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 ZNF630Q2M218 657 aaPredicted RBP3.79□□□□□ -1.8
SPG11-211ENST00000558561 FAM174BQ3ZCQ3 159 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 SLC30A6Q6NXT4 461 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 CDC73Q6P1J9 531 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 ARHGAP11AQ6P4F7 1023 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 ZNF621Q6ZSS3 439 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 IKBIPQ70UQ0 350 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 COMTD1Q86VU5 262 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 RNF130Q86XS8 419 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 PLCZ1Q86YW0 608 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 MSRB3Q8IXL7 192 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 GPALPP1Q8IXQ4 340 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 UBQLNLQ8IYU4 475 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 ANKFN1Q8N957 763 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 FADS6Q8N9I5 356 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 RELL2Q8NC24 303 aaPredicted RBP3.79□□□□□ -1.8
SPG11-211ENST00000558561 C17orf47Q8NEP4 570 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 ATP6V1C2Q8NEY4 427 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 LILRB4Q8NHJ6 448 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 PSMA8Q8TAA3 256 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 LINC01560Q8TB33 94 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 CKAP2Q8WWK9 683 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 IGFBPL1Q8WX77 278 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 FIG4Q92562 907 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 ZBED6CLQ96FA7 236 aaPredicted RBP3.79□□□□□ -1.8
SPG11-211ENST00000558561 CHMP6Q96FZ7 201 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 MAELQ96JY0 434 aaKnown RBP3.79□□□□□ -1.8
SPG11-211ENST00000558561 ABHD14AQ9BUJ0 271 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 OSBPL11Q9BXB4 747 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 DPY30Q9C005 99 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 TRIM2Q9C040 744 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 PRSS22Q9GZN4 317 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 OR51I1Q9H343 314 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 PIGUQ9H490 435 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 TMEM185BQ9H7F4 350 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 ACSS1Q9NUB1 689 aaPredicted RBP3.79□□□□□ -1.8
SPG11-211ENST00000558561 ZCCHC3Q9NUD5 404 aaKnown RBP3.79□□□□□ -1.8
SPG11-211ENST00000558561 GIMAP4Q9NUV9 329 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 DDX18Q9NVP1 670 aaKnown RBP3.79□□□□□ -1.8
SPG11-211ENST00000558561 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.79□□□□□ -1.8
SPG11-211ENST00000558561 AIG1Q9NVV5 245 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 TAS2R10Q9NYW0 307 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 KLRF1Q9NZS2 232 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 SENP1Q9P0U3 644 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 CLEC4AQ9UMR7 237 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 RCE1Q9Y256 329 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 EIF3LQ9Y262 564 aaKnown RBP3.79□□□□□ -1.8
SPG11-211ENST00000558561 VDAC3Q9Y277 283 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 CARD8Q9Y2G2 431 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 WBP11Q9Y2W2 641 aaKnown RBP3.79□□□□□ -1.8
SPG11-211ENST00000558561 OR10H1Q9Y4A9 318 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 USH1CQ9Y6N9 552 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 ABCA4P78363 2273 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 POLQO75417 2590 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 APCP25054 2843 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 NOTCH2Q04721 2471 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 SPG11Q96JI7 2443 aa3.79□□□□□ -1.8
SPG11-211ENST00000558561 ABCA12Q86UK0 2595 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 RTTNQ86VV8 2226 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 PRSS51A0A1B0GVH4 220 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 A0A1W2PPR1 153 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 OR2M5A3KFT3 312 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 B9A039 149 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 E9PBE3 544 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 HMGN4O00479 90 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 ACOX3O15254 700 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 HDAC3O15379 428 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 ERLIN1O75477 346 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 UGT2B17O75795 530 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 AQP8O94778 261 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 SNX4O95219 450 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 CLDN14O95500 239 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 EPPINO95925 133 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 TUBBP07437 444 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 CHRM4P08173 479 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 ALOX5P09917 674 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 ETFAP13804 333 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 HOXB9P17482 250 aaPredicted RBP3.78□□□□□ -1.8
SPG11-211ENST00000558561 IGFBP2P18065 325 aa3.78□□□□□ -1.8
SPG11-211ENST00000558561 CAPN3P20807 821 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms