RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 IL1AP01583 271 aa13□□□□□ -0.33
SPG11-210ENST00000558319 HES1Q14469 280 aa13□□□□□ -0.33
SPG11-210ENST00000558319 MELKQ14680 651 aa13□□□□□ -0.33
SPG11-210ENST00000558319 OR8B8Q15620 311 aa13□□□□□ -0.33
SPG11-210ENST00000558319 SSX7Q7RTT5 188 aa13□□□□□ -0.33
SPG11-210ENST00000558319 PRSS45Q7RTY3 260 aa13□□□□□ -0.33
SPG11-210ENST00000558319 SIAH3Q8IW03 269 aa13□□□□□ -0.33
SPG11-210ENST00000558319 NANPQ8TBE9 248 aa13□□□□□ -0.33
SPG11-210ENST00000558319 FGF13Q92913 245 aa13□□□□□ -0.33
SPG11-210ENST00000558319 C20orf85Q9H1P6 137 aa13□□□□□ -0.33
SPG11-210ENST00000558319 KLHL42Q9P2K6 505 aa13□□□□□ -0.33
SPG11-210ENST00000558319 DUSP13Q9UII6 198 aa13□□□□□ -0.33
SPG11-210ENST00000558319 V9GYS6 101 aa13□□□□□ -0.33
SPG11-210ENST00000558319 SPATA31D1Q6ZQQ2 1576 aa13□□□□□ -0.33
SPG11-210ENST00000558319 AQP7O14520 342 aa13□□□□□ -0.33
SPG11-210ENST00000558319 TIMM8AO60220 97 aaPredicted RBP13□□□□□ -0.33
SPG11-210ENST00000558319 ZNF217O75362 1048 aa13□□□□□ -0.33
SPG11-210ENST00000558319 CTSCP53634 463 aa13□□□□□ -0.33
SPG11-210ENST00000558319 MRPS10P82664 201 aaKnown RBP13□□□□□ -0.33
SPG11-210ENST00000558319 ALKBH6Q3KRA9 238 aa13□□□□□ -0.33
SPG11-210ENST00000558319 BCDIN3DQ7Z5W3 292 aaKnown RBP13□□□□□ -0.33
SPG11-210ENST00000558319 HERPUD2Q9BSE4 406 aa13□□□□□ -0.33
SPG11-210ENST00000558319 SDHAF2Q9NX18 166 aa13□□□□□ -0.33
SPG11-210ENST00000558319 GABRR3A8MPY1 467 aa12.99□□□□□ -0.33
SPG11-210ENST00000558319 HOXA11P31270 313 aaPredicted RBP12.99□□□□□ -0.33
SPG11-210ENST00000558319 POLR2IP36954 125 aaKnown RBP12.99□□□□□ -0.33
SPG11-210ENST00000558319 CSNK1A1P48729 337 aa12.99□□□□□ -0.33
SPG11-210ENST00000558319 HMGN3Q15651 99 aa12.99□□□□□ -0.33
SPG11-210ENST00000558319 AADACL3Q5VUY0 350 aa12.99□□□□□ -0.33
SPG11-210ENST00000558319 KDELC1Q6UW63 502 aa12.99□□□□□ -0.33
SPG11-210ENST00000558319 MARC2Q969Z3 335 aa12.99□□□□□ -0.33
SPG11-210ENST00000558319 SORCS2Q96PQ0 1159 aa12.99□□□□□ -0.33
SPG11-210ENST00000558319 C8orf33Q9H7E9 229 aaPredicted RBP12.99□□□□□ -0.33
SPG11-210ENST00000558319 ELOVL3Q9HB03 270 aa12.99□□□□□ -0.33
SPG11-210ENST00000558319 EFSO43281 561 aa12.99□□□□□ -0.33
SPG11-210ENST00000558319 AK1P00568 194 aa12.99□□□□□ -0.33
SPG11-210ENST00000558319 PTHP01270 115 aa12.99□□□□□ -0.33
SPG11-210ENST00000558319 GASTP01350 101 aa12.99□□□□□ -0.33
SPG11-210ENST00000558319 THBS1P07996 1170 aa12.99□□□□□ -0.33
SPG11-210ENST00000558319 ACP2P11117 423 aa12.99□□□□□ -0.33
SPG11-210ENST00000558319 VASPP50552 380 aaPredicted RBP12.99□□□□□ -0.33
SPG11-210ENST00000558319 TMUB2Q71RG4 321 aa12.99□□□□□ -0.33
SPG11-210ENST00000558319 TPRA1Q86W33 373 aa12.99□□□□□ -0.33
SPG11-210ENST00000558319 OR52D1Q9H346 318 aa12.99□□□□□ -0.33
SPG11-210ENST00000558319 ZMAT3Q9HA38 289 aaKnown RBP12.99□□□□□ -0.33
SPG11-210ENST00000558319 DHCR7Q9UBM7 475 aaKnown RBP12.99□□□□□ -0.33
SPG11-210ENST00000558319 BTNL2Q9UIR0 455 aa12.99□□□□□ -0.33
SPG11-210ENST00000558319 OR5K4A6NMS3 321 aa12.99□□□□□ -0.33
SPG11-210ENST00000558319 CLEC3BP05452 202 aa12.99□□□□□ -0.33
SPG11-210ENST00000558319 HOXA1P49639 335 aaPredicted RBP12.99□□□□□ -0.33
SPG11-210ENST00000558319 P2RX1P51575 399 aa12.99□□□□□ -0.33
SPG11-210ENST00000558319 GNB1P62873 340 aa12.99□□□□□ -0.33
SPG11-210ENST00000558319 NHSL2Q5HYW2 709 aa12.99□□□□□ -0.33
SPG11-210ENST00000558319 ADAMTS14Q8WXS8 1223 aa12.99□□□□□ -0.33
SPG11-210ENST00000558319 MS4A4EQ96PG1 132 aa12.99□□□□□ -0.33
SPG11-210ENST00000558319 CMSS1Q9BQ75 279 aaKnown RBP12.99□□□□□ -0.33
SPG11-210ENST00000558319 TRBV4-1A0A0J9YWV2 114 aa12.99□□□□□ -0.33
SPG11-210ENST00000558319 CPMP14384 443 aa12.99□□□□□ -0.33
SPG11-210ENST00000558319 S100A11P31949 105 aa12.99□□□□□ -0.33
SPG11-210ENST00000558319 GLO1Q04760 184 aa12.99□□□□□ -0.33
SPG11-210ENST00000558319 LANCL3Q6ZV70 420 aa12.99□□□□□ -0.33
SPG11-210ENST00000558319 BHLHE23Q8NDY6 225 aa12.99□□□□□ -0.33
SPG11-210ENST00000558319 POFUT1Q9H488 388 aa12.99□□□□□ -0.33
SPG11-210ENST00000558319 NPAP1Q9NZP6 1156 aa12.99□□□□□ -0.33
SPG11-210ENST00000558319 ZMAT5Q9UDW3 170 aaKnown RBP12.99□□□□□ -0.33
SPG11-210ENST00000558319 ARL2-SNX15V9GYD0 113 aa12.99□□□□□ -0.33
SPG11-210ENST00000558319 KIF1AQ12756 1690 aa12.99□□□□□ -0.33
SPG11-210ENST00000558319 METTL15A6NJ78 407 aa12.99□□□□□ -0.33
SPG11-210ENST00000558319 GPR137BO60478 399 aa12.99□□□□□ -0.33
SPG11-210ENST00000558319 ADAMTS4O75173 837 aa12.99□□□□□ -0.33
SPG11-210ENST00000558319 OR2C1O95371 312 aa12.99□□□□□ -0.33
SPG11-210ENST00000558319 SLC2A1P11166 492 aa12.99□□□□□ -0.33
SPG11-210ENST00000558319 SDC1P18827 310 aa12.99□□□□□ -0.33
SPG11-210ENST00000558319 ANXA7P20073 488 aaKnown RBP12.99□□□□□ -0.33
SPG11-210ENST00000558319 CNR1P21554 472 aa12.99□□□□□ -0.33
SPG11-210ENST00000558319 CLDN17P56750 224 aa12.99□□□□□ -0.33
SPG11-210ENST00000558319 RPE65Q16518 533 aa12.99□□□□□ -0.33
SPG11-210ENST00000558319 SLC6A19Q695T7 634 aa12.99□□□□□ -0.33
SPG11-210ENST00000558319 OR8U1Q8NH10 309 aa12.99□□□□□ -0.33
SPG11-210ENST00000558319 RAB39BQ96DA2 213 aa12.99□□□□□ -0.33
SPG11-210ENST00000558319 NIPSNAP3BQ9BS92 247 aa12.99□□□□□ -0.33
SPG11-210ENST00000558319 MCOLN1Q9GZU1 580 aa12.99□□□□□ -0.33
SPG11-210ENST00000558319 SLC45A1Q9Y2W3 748 aa12.99□□□□□ -0.33
SPG11-210ENST00000558319 TMEM184BQ9Y519 407 aaPredicted RBP12.99□□□□□ -0.33
SPG11-210ENST00000558319 VIRMAQ69YN4 1812 aaKnown RBP12.98□□□□□ -0.33
SPG11-210ENST00000558319 NSG1A0A0A6YYJ2 146 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 BCAT2O15382 392 aaPredicted RBP12.98□□□□□ -0.33
SPG11-210ENST00000558319 H3F3CQ6NXT2 135 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 MAMDC4Q6UXC1 1216 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 PARS2Q7L3T8 475 aaKnown RBP12.98□□□□□ -0.33
SPG11-210ENST00000558319 LRP10Q7Z4F1 713 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 GRAMD2AQ8IUY3 354 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 ZBTB44Q8NCP5 570 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 UBXN10Q96LJ8 280 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 C1orf123Q9NWV4 160 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 MYH13Q9UKX3 1938 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 CLDN24A6NM45 220 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 SEC14L6B5MCN3 397 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 LGALS8O00214 317 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 CPN1P15169 458 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms