RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 HIST1H2ACQ93077 130 aa10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 HAVCR1Q96D42 359 aa10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 HSPA12BQ96MM6 686 aa10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 PTCHD1Q96NR3 888 aa10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 SLITRK2Q9H156 845 aa10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 TTYH1Q9H313 450 aaPredicted RBP10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 IL21RQ9HBE5 538 aa10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 POLE3Q9NRF9 147 aa10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 OR5V1Q9UGF6 321 aa10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 SLC22A7Q9Y694 548 aa10.85□□□□□ -0.67
VIPAS39-211ENST00000557658 URADA6NGE7 173 aa10.84□□□□□ -0.67
VIPAS39-211ENST00000557658 HMSDA8MTL9 139 aa10.84□□□□□ -0.67
VIPAS39-211ENST00000557658 ATP6V1G2-DDX39BF2Z307 99 aa10.84□□□□□ -0.67
VIPAS39-211ENST00000557658 NARSO43776 548 aaKnown RBP10.84□□□□□ -0.67
VIPAS39-211ENST00000557658 SMIM10L1P0DMW3 83 aa10.84□□□□□ -0.67
VIPAS39-211ENST00000557658 PPP3CBP16298 524 aa10.84□□□□□ -0.67
VIPAS39-211ENST00000557658 POU3F2P20265 443 aaPredicted RBP10.84□□□□□ -0.67
VIPAS39-211ENST00000557658 ZNF10P21506 573 aaPredicted RBP10.84□□□□□ -0.67
VIPAS39-211ENST00000557658 CDK2P24941 298 aa10.84□□□□□ -0.67
VIPAS39-211ENST00000557658 MNDAP41218 407 aa10.84□□□□□ -0.67
VIPAS39-211ENST00000557658 KIAA1024LP59773 190 aa10.84□□□□□ -0.67
VIPAS39-211ENST00000557658 SLC35D3Q5M8T2 416 aa10.84□□□□□ -0.67
VIPAS39-211ENST00000557658 SFRP5Q5T4F7 317 aa10.84□□□□□ -0.67
VIPAS39-211ENST00000557658 ALKAL2Q6UX46 152 aa10.84□□□□□ -0.67
VIPAS39-211ENST00000557658 TMUB2Q71RG4 321 aa10.84□□□□□ -0.67
VIPAS39-211ENST00000557658 NAXDQ8IW45 347 aa10.84□□□□□ -0.67
VIPAS39-211ENST00000557658 SLC35F3Q8IY50 421 aa10.84□□□□□ -0.67
VIPAS39-211ENST00000557658 DNAAF1Q8NEP3 725 aa10.84□□□□□ -0.67
VIPAS39-211ENST00000557658 TOE1Q96GM8 510 aaKnown RBP10.84□□□□□ -0.67
VIPAS39-211ENST00000557658 SMIM10Q96HG1 83 aa10.84□□□□□ -0.67
VIPAS39-211ENST00000557658 SLC17A4Q9Y2C5 497 aa10.84□□□□□ -0.67
VIPAS39-211ENST00000557658 ETV7Q9Y603 341 aa10.84□□□□□ -0.67
VIPAS39-211ENST00000557658 A8MXK9 166 aa10.84□□□□□ -0.67
VIPAS39-211ENST00000557658 ARPC5O15511 151 aa10.84□□□□□ -0.67
VIPAS39-211ENST00000557658 SELENOFO60613 162 aa10.84□□□□□ -0.67
VIPAS39-211ENST00000557658 DNAJB6O75190 326 aa10.84□□□□□ -0.67
VIPAS39-211ENST00000557658 CSF2RAP15509 400 aa10.84□□□□□ -0.67
VIPAS39-211ENST00000557658 AK4P27144 223 aaPredicted RBP10.84□□□□□ -0.67
VIPAS39-211ENST00000557658 CALCRP30988 508 aa10.84□□□□□ -0.67
VIPAS39-211ENST00000557658 FAUP35544 74 aaKnown RBP10.84□□□□□ -0.67
VIPAS39-211ENST00000557658 TAS2R20P59543 309 aa10.84□□□□□ -0.67
VIPAS39-211ENST00000557658 IL10RAQ13651 578 aa10.84□□□□□ -0.67
VIPAS39-211ENST00000557658 CBFBQ13951 182 aa10.84□□□□□ -0.67
VIPAS39-211ENST00000557658 NDUFAF6Q330K2 333 aa10.84□□□□□ -0.67
VIPAS39-211ENST00000557658 NHLRC1Q6VVB1 395 aa10.84□□□□□ -0.67
VIPAS39-211ENST00000557658 RPS4Y2Q8TD47 263 aa10.84□□□□□ -0.67
VIPAS39-211ENST00000557658 PNPLA2Q96AD5 504 aa10.84□□□□□ -0.67
VIPAS39-211ENST00000557658 MIB2Q96AX9 1013 aa10.84□□□□□ -0.67
VIPAS39-211ENST00000557658 SGTBQ96EQ0 304 aa10.84□□□□□ -0.67
VIPAS39-211ENST00000557658 C2orf42Q9NWW7 574 aa10.84□□□□□ -0.67
VIPAS39-211ENST00000557658 MED11Q9P086 117 aa10.84□□□□□ -0.67
VIPAS39-211ENST00000557658 ENTPD2Q9Y5L3 495 aa10.84□□□□□ -0.67
VIPAS39-211ENST00000557658 TICRRQ7Z2Z1 1910 aa10.84□□□□□ -0.67
VIPAS39-211ENST00000557658 MCIDASD6RGH6 385 aa10.83□□□□□ -0.68
VIPAS39-211ENST00000557658 SCAMP1O15126 338 aa10.83□□□□□ -0.68
VIPAS39-211ENST00000557658 LDB3O75112 727 aa10.83□□□□□ -0.68
VIPAS39-211ENST00000557658 LPLP06858 475 aa10.83□□□□□ -0.68
VIPAS39-211ENST00000557658 PTHLHP12272 177 aa10.83□□□□□ -0.68
VIPAS39-211ENST00000557658 IL32P24001 234 aa10.83□□□□□ -0.68
VIPAS39-211ENST00000557658 RPL4P36578 427 aaKnown RBP10.83□□□□□ -0.68
VIPAS39-211ENST00000557658 FGL2Q14314 439 aa10.83□□□□□ -0.68
VIPAS39-211ENST00000557658 EXOSC7Q15024 291 aaKnown RBP10.83□□□□□ -0.68
VIPAS39-211ENST00000557658 FBXO42Q6P3S6 717 aa10.83□□□□□ -0.68
VIPAS39-211ENST00000557658 OR6K6Q8NGW6 343 aa10.83□□□□□ -0.68
VIPAS39-211ENST00000557658 TM4SF19Q96DZ7 209 aa10.83□□□□□ -0.68
VIPAS39-211ENST00000557658 GINS4Q9BRT9 223 aa10.83□□□□□ -0.68
VIPAS39-211ENST00000557658 TCF7L1Q9HCS4 588 aa10.83□□□□□ -0.68
VIPAS39-211ENST00000557658 THAP10Q9P2Z0 257 aaPredicted RBP10.83□□□□□ -0.68
VIPAS39-211ENST00000557658 P2RX6O15547 441 aa10.83□□□□□ -0.68
VIPAS39-211ENST00000557658 TPPPO94811 219 aa10.83□□□□□ -0.68
VIPAS39-211ENST00000557658 ZFPL1O95159 310 aa10.83□□□□□ -0.68
VIPAS39-211ENST00000557658 ACRP10323 421 aa10.83□□□□□ -0.68
VIPAS39-211ENST00000557658 GABRA1P14867 456 aa10.83□□□□□ -0.68
VIPAS39-211ENST00000557658 SPI1P17947 270 aa10.83□□□□□ -0.68
VIPAS39-211ENST00000557658 MAP3K8P41279 467 aa10.83□□□□□ -0.68
VIPAS39-211ENST00000557658 SGCGQ13326 291 aa10.83□□□□□ -0.68
VIPAS39-211ENST00000557658 GK2Q14410 553 aaPredicted RBP10.83□□□□□ -0.68
VIPAS39-211ENST00000557658 CST6Q15828 149 aa10.83□□□□□ -0.68
VIPAS39-211ENST00000557658 ZC3H14Q6PJT7 736 aaKnown RBP10.83□□□□□ -0.68
VIPAS39-211ENST00000557658 TFAP2EQ6VUC0 442 aa10.83□□□□□ -0.68
VIPAS39-211ENST00000557658 DPY19L2P2Q6ZN68 376 aa10.83□□□□□ -0.68
VIPAS39-211ENST00000557658 ZAR1Q86SH2 424 aa10.83□□□□□ -0.68
VIPAS39-211ENST00000557658 ZNRF4Q8WWF5 429 aa10.83□□□□□ -0.68
VIPAS39-211ENST00000557658 WDR89Q96FK6 387 aaPredicted RBP10.83□□□□□ -0.68
VIPAS39-211ENST00000557658 B3GNT4Q9C0J1 378 aa10.83□□□□□ -0.68
VIPAS39-211ENST00000557658 ARL6Q9H0F7 186 aa10.83□□□□□ -0.68
VIPAS39-211ENST00000557658 MKKSQ9NPJ1 570 aaPredicted RBP10.83□□□□□ -0.68
VIPAS39-211ENST00000557658 OPN4Q9UHM6 478 aa10.83□□□□□ -0.68
VIPAS39-211ENST00000557658 ADAM18Q9Y3Q7 739 aa10.83□□□□□ -0.68
VIPAS39-211ENST00000557658 SPACA6W5XKT8 324 aa10.83□□□□□ -0.68
VIPAS39-211ENST00000557658 PTPRSQ13332 1948 aa10.83□□□□□ -0.68
VIPAS39-211ENST00000557658 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 SLC22A23A1A5C7 686 aa10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 ZNF860A6NHJ4 632 aa10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 POM121CA8CG34 1229 aa10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 IDSB3KWA1 339 aa10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 PYCARD-AS1I3L0S3 204 aa10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 TOR1AO14656 332 aa10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 FGF17O60258 216 aa10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 CTNSO60931 367 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms