RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 CLEC4FQ8N1N0 589 aa4.06□□□□□ -1.76
MTHFD1-216ENST00000557539 ARL14Q8N4G2 192 aa4.06□□□□□ -1.76
MTHFD1-216ENST00000557539 OR1F12Q8NHA8 337 aa4.06□□□□□ -1.76
MTHFD1-216ENST00000557539 SCFD1Q8WVM8 642 aa4.06□□□□□ -1.76
MTHFD1-216ENST00000557539 SDSLQ96GA7 329 aa4.06□□□□□ -1.76
MTHFD1-216ENST00000557539 LYZL4Q96KX0 146 aa4.06□□□□□ -1.76
MTHFD1-216ENST00000557539 CFAP53Q96M91 514 aa4.06□□□□□ -1.76
MTHFD1-216ENST00000557539 C12orf66Q96MD2 445 aa4.06□□□□□ -1.76
MTHFD1-216ENST00000557539 ZNF300Q96RE9 604 aaPredicted RBP4.06□□□□□ -1.76
MTHFD1-216ENST00000557539 USP28Q96RU2 1077 aa4.06□□□□□ -1.76
MTHFD1-216ENST00000557539 EPYCQ99645 322 aa4.06□□□□□ -1.76
MTHFD1-216ENST00000557539 CHRDL1Q9BU40 450 aa4.06□□□□□ -1.76
MTHFD1-216ENST00000557539 TSSK1BQ9BXA7 367 aa4.06□□□□□ -1.76
MTHFD1-216ENST00000557539 NXF5Q9H1B4 397 aaKnown RBP4.06□□□□□ -1.76
MTHFD1-216ENST00000557539 LIME1Q9H400 295 aa4.06□□□□□ -1.76
MTHFD1-216ENST00000557539 ESM1Q9NQ30 184 aa4.06□□□□□ -1.76
MTHFD1-216ENST00000557539 POLE4Q9NR33 117 aa4.06□□□□□ -1.76
MTHFD1-216ENST00000557539 NOTCH3Q9UM47 2321 aa4.06□□□□□ -1.76
MTHFD1-216ENST00000557539 CEP192Q8TEP8 1941 aa4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 IGSF9BQ9UPX0 1349 aa4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 IGHV3-20A0A0C4DH32 117 aa4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 TRBV5-4A0A0C4DH59 114 aa4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 G3V2L1 256 aa4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 H0YIV9 168 aa4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 K7EM74 188 aa4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 K7EQD1 137 aa4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 M0QZ92 97 aa4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 OR7A17O14581 309 aa4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 TRDMT1O14717 391 aaKnown RBP4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 LRRTM2O43300 516 aa4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 PCDH7O60245 1069 aa4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 LMX1BO60663 402 aa4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 SORBS2O94875 1100 aaKnown RBP4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 F10P00742 488 aa4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 ALPIP09923 528 aa4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 PABPC4LP0CB38 370 aaKnown RBP4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 HSMCR30P0CW71 290 aa4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 HTR1EP28566 365 aa4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 CHRNB4P30926 498 aa4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 THBS3P49746 956 aa4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 STK19P49842 368 aaPredicted RBP4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 NDST2P52849 883 aa4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 CDH4P55283 916 aa4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 ERVFC1-1P60608 527 aa4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 PHEXP78562 749 aa4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 ZNF85Q03923 595 aa4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 FASTKQ14296 549 aaKnown RBP4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 TMEM52BQ4KMG9 183 aa4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 CYBRD1Q53TN4 286 aa4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 PDZK1Q5T2W1 519 aa4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 OR4F3Q6IEY1 312 aa4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 FAM71F2Q6NXP2 309 aa4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 LCLAT1Q6UWP7 414 aa4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 Q6ZRP5 223 aa4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 HSD11B1LQ7Z5J1 315 aa4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 SMIM29Q86T20 159 aa4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 ECHDC2Q86YB7 292 aa4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 SAMD12Q8N8I0 201 aa4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 ZNRF1Q8ND25 227 aa4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 CCDC148Q8NFR7 591 aa4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 OR10G7Q8NGN6 311 aa4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 SGMS2Q8NHU3 365 aa4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 DNAJA3Q96EY1 480 aa4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 SLC6A7Q99884 636 aa4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 P2RY13Q9BPV8 354 aa4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 C19orf43Q9BQ61 176 aa4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 FEM1AQ9BSK4 669 aa4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 CABLES2Q9BTV7 478 aa4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 MMP28Q9H239 520 aa4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 RNF41Q9H4P4 317 aaPredicted RBP4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 SLC17A5Q9NRA2 495 aa4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 ZDHHC18Q9NUE0 388 aa4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 CYTH4Q9UIA0 394 aa4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 ABCA13Q86UQ4 5058 aa4.05□□□□□ -1.76
MTHFD1-216ENST00000557539 ANK3Q12955 4377 aaKnown RBP4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 A0A1B0GUV1 79 aa4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 A0A1W2PNU3 283 aaPredicted RBP4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 LRP5LA4QPB2 252 aa4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 ACOT8O14734 319 aa4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 TM9SF1O15321 606 aa4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 NBR2O15453 112 aa4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 SRPX2O60687 465 aaPredicted RBP4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 TNFSF15O95150 251 aa4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 NXPH4O95158 308 aa4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 TSPAN12O95859 305 aa4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 CA1P00915 261 aaPredicted RBP4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 JCHAINP01591 159 aa4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 IGFBP1P08833 259 aaPredicted RBP4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 HOXB7P09629 217 aa4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 CCDC159P0C7I6 412 aa4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 CCDC130P13994 396 aa4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 POU2F1P14859 743 aa4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 ACADSP16219 412 aa4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 PGCP20142 388 aa4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 PRKACGP22612 351 aa4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 U2AF2P26368 475 aaKnown RBP eCLIP4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 HOXA9P31269 272 aa4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 SLC11A1P49279 550 aa4.04□□□□□ -1.76
MTHFD1-216ENST00000557539 POU3F4P49335 361 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms