RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 RASGEF1BQ0VAM2 473 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 HSPB3Q12988 150 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 TOMM34Q15785 309 aaPredicted RBP5.12□□□□□ -1.59
VPS33B-207ENST00000557470 CARTPTQ16568 116 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 DUSP5Q16690 384 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 VPS26BQ4G0F5 336 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 UNC50Q53HI1 259 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 ARL13AQ5H913 290 aaPredicted RBP5.12□□□□□ -1.59
VPS33B-207ENST00000557470 SPDYAQ5MJ70 313 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 CCNJQ5T5M9 372 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 CBLN3Q6UW01 205 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 IKBIPQ70UQ0 350 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 MISPQ8IVT2 679 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 ZNF100Q8IYN0 542 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 MMGT1Q8N4V1 131 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 RFLNBQ8N5W9 214 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 CDRT4Q8N9R6 151 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 SLC16A11Q8NCK7 471 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 FAM110BQ8TC76 370 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 METTL6Q8TCB7 284 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 ZNF75CPQ92670 426 aaPredicted RBP5.12□□□□□ -1.59
VPS33B-207ENST00000557470 RAB24Q969Q5 203 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 CIDECQ96AQ7 238 aaPredicted RBP5.12□□□□□ -1.59
VPS33B-207ENST00000557470 FOXRED1Q96CU9 486 aaPredicted RBP5.12□□□□□ -1.59
VPS33B-207ENST00000557470 GIMAP5Q96F15 307 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 C16orf45Q96MC5 204 aaPredicted RBP5.12□□□□□ -1.59
VPS33B-207ENST00000557470 SORCS2Q96PQ0 1159 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 TMEM237Q96Q45 408 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 CITED2Q99967 270 aaPredicted RBP5.12□□□□□ -1.59
VPS33B-207ENST00000557470 PIMREGQ9BSJ6 248 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 INPP5KQ9BT40 448 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 C1QTNF6Q9BXI9 259 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 C12orf65Q9H3J6 166 aaKnown RBP5.12□□□□□ -1.59
VPS33B-207ENST00000557470 SMURF2Q9HAU4 748 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 MYNNQ9NPC7 610 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 UBQLN4Q9NRR5 601 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 DECR2Q9NUI1 292 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 SIRT5Q9NXA8 310 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 GRID1Q9ULK0 1009 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 HSF4Q9ULV5 492 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 POLR3HQ9Y535 204 aaPredicted RBP5.12□□□□□ -1.59
VPS33B-207ENST00000557470 TIMM22Q9Y584 194 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 SLC25A15Q9Y619 301 aa5.12□□□□□ -1.59
VPS33B-207ENST00000557470 NPIPA5A0A0B4J1W7 369 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 CIB4A0PJX0 185 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 SHISA3A0PJX4 238 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 CCT8L1PA6NM43 557 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 ZNF724A8MTY0 619 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 NPIPA7E9PJI5 369 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 ATP6V1G2-DDX39BF2Z307 99 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 PDLIM1O00151 329 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 NDUFS8O00217 210 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 DNPH1O43598 174 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 H6PDO95479 791 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 NUDT14O95848 222 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 ENO1P06733 434 aaKnown RBP5.11□□□□□ -1.59
VPS33B-207ENST00000557470 NPIPA8P0DM63 369 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 PRKCAP17252 672 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 EGR1P18146 543 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 FPR2P25090 351 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 GCH1P30793 250 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 LCN1P31025 176 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 PSMD7P51665 324 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 FOXG1P55316 489 aaPredicted RBP5.11□□□□□ -1.59
VPS33B-207ENST00000557470 FOXA1P55317 472 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 GNG11P61952 73 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 ROM1Q03395 351 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 CHRNB3Q05901 458 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 C2orf54Q08AI8 447 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 MRPL28Q13084 256 aaKnown RBP5.11□□□□□ -1.59
VPS33B-207ENST00000557470 LCP2Q13094 533 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 SELENBP1Q13228 472 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 RAB32Q13637 225 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 MST1LQ2TV78 715 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 NDUFAF6Q330K2 333 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 C2orf76Q3KRA6 126 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 FAM174BQ3ZCQ3 159 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 IQCCQ4KMZ1 466 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 ZNF678Q5SXM1 525 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.11□□□□□ -1.59
VPS33B-207ENST00000557470 FBXW9Q5XUX1 488 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 ANKRD26P1Q6NSI1 321 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 BHLHB9Q6PI77 547 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 PIWIL3Q7Z3Z3 882 aaKnown RBP5.11□□□□□ -1.59
VPS33B-207ENST00000557470 Q8N1Y9 231 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 UBE2J2Q8N2K1 259 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 C10orf53Q8N6V4 93 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 COX18Q8N8Q8 333 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 ANKS4BQ8N8V4 417 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 ZNF540Q8NDQ6 660 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 HIPK4Q8NE63 616 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 Q8NFD4 153 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 NUP43Q8NFH3 380 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 PHOSPHO1Q8TCT1 267 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 GPR119Q8TDV5 335 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 PTP4A1Q93096 173 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 C16orf58Q96GQ5 468 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 EGLN2Q96KS0 407 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 MRGPRX4Q96LA9 322 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 FOXN4Q96NZ1 517 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms