RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 LTBQ06643 244 aa9.46□□□□□ -0.9
LINC00239-201ENST00000556973 ITGADQ13349 1161 aa9.46□□□□□ -0.9
LINC00239-201ENST00000556973 POU4F3Q15319 338 aa9.46□□□□□ -0.9
LINC00239-201ENST00000556973 SPATS1Q496A3 300 aa9.46□□□□□ -0.9
LINC00239-201ENST00000556973 FBXW9Q5XUX1 488 aa9.46□□□□□ -0.9
LINC00239-201ENST00000556973 ANKRD34AQ69YU3 496 aa9.46□□□□□ -0.9
LINC00239-201ENST00000556973 CREB3L2Q70SY1 520 aa9.46□□□□□ -0.9
LINC00239-201ENST00000556973 FKBP9P1Q75LS8 142 aa9.46□□□□□ -0.9
LINC00239-201ENST00000556973 H1FNTQ75WM6 255 aaPredicted RBP9.46□□□□□ -0.9
LINC00239-201ENST00000556973 TMEM200AQ86VY9 491 aa9.46□□□□□ -0.9
LINC00239-201ENST00000556973 LSRQ86X29 649 aaPredicted RBP9.46□□□□□ -0.9
LINC00239-201ENST00000556973 P3H2Q8IVL5 708 aa9.46□□□□□ -0.9
LINC00239-201ENST00000556973 UBE2J2Q8N2K1 259 aa9.46□□□□□ -0.9
LINC00239-201ENST00000556973 FAM162AQ96A26 154 aa9.46□□□□□ -0.9
LINC00239-201ENST00000556973 TMEM45BQ96B21 275 aa9.46□□□□□ -0.9
LINC00239-201ENST00000556973 SLC41A3Q96GZ6 507 aa9.46□□□□□ -0.9
LINC00239-201ENST00000556973 LURAP1Q96LR2 239 aa9.46□□□□□ -0.9
LINC00239-201ENST00000556973 OXGR1Q96P68 337 aa9.46□□□□□ -0.9
LINC00239-201ENST00000556973 CDRT15Q96T59 188 aa9.46□□□□□ -0.9
LINC00239-201ENST00000556973 PRSS27Q9BQR3 290 aa9.46□□□□□ -0.9
LINC00239-201ENST00000556973 ASPNQ9BXN1 380 aa9.46□□□□□ -0.9
LINC00239-201ENST00000556973 POLDIP3Q9BY77 421 aaKnown RBP9.46□□□□□ -0.9
LINC00239-201ENST00000556973 SLC19A3Q9BZV2 496 aa9.46□□□□□ -0.9
LINC00239-201ENST00000556973 GORASP2Q9H8Y8 452 aa9.46□□□□□ -0.9
LINC00239-201ENST00000556973 RASSF1Q9NS23 344 aa9.46□□□□□ -0.9
LINC00239-201ENST00000556973 C6orf203Q9P0P8 240 aaPredicted RBP9.46□□□□□ -0.9
LINC00239-201ENST00000556973 CD300AQ9UGN4 299 aa9.46□□□□□ -0.9
LINC00239-201ENST00000556973 EGFL7Q9UHF1 273 aa9.46□□□□□ -0.9
LINC00239-201ENST00000556973 RIMS3Q9UJD0 308 aa9.46□□□□□ -0.9
LINC00239-201ENST00000556973 RPS6KA6Q9UK32 745 aa9.46□□□□□ -0.9
LINC00239-201ENST00000556973 CELSR2Q9HCU4 2923 aa9.45□□□□□ -0.9
LINC00239-201ENST00000556973 ADGRG4Q8IZF6 3080 aa9.45□□□□□ -0.9
LINC00239-201ENST00000556973 FLNBO75369 2602 aaKnown RBP9.45□□□□□ -0.9
LINC00239-201ENST00000556973 MS4A18H0YCH9 400 aa9.45□□□□□ -0.9
LINC00239-201ENST00000556973 OR5F1O95221 314 aa9.45□□□□□ -0.9
LINC00239-201ENST00000556973 ZNF682O95780 498 aa9.45□□□□□ -0.9
LINC00239-201ENST00000556973 MT-ATP6P00846 226 aa9.45□□□□□ -0.9
LINC00239-201ENST00000556973 BGLAPP02818 100 aa9.45□□□□□ -0.9
LINC00239-201ENST00000556973 IFNW1P05000 195 aa9.45□□□□□ -0.9
LINC00239-201ENST00000556973 NCK1P16333 377 aa9.45□□□□□ -0.9
LINC00239-201ENST00000556973 ZNF43P17038 809 aa9.45□□□□□ -0.9
LINC00239-201ENST00000556973 CBLP22681 906 aa9.45□□□□□ -0.9
LINC00239-201ENST00000556973 CRYGSP22914 178 aa9.45□□□□□ -0.9
LINC00239-201ENST00000556973 IL32P24001 234 aa9.45□□□□□ -0.9
LINC00239-201ENST00000556973 RBM34P42696 430 aaKnown RBP9.45□□□□□ -0.9
LINC00239-201ENST00000556973 KRTAP10-9P60411 292 aa9.45□□□□□ -0.9
LINC00239-201ENST00000556973 ST3GAL3Q11203 375 aa9.45□□□□□ -0.9
LINC00239-201ENST00000556973 PIN1Q13526 163 aaPredicted RBP9.45□□□□□ -0.9
LINC00239-201ENST00000556973 MS4A18Q3C1V0 323 aa9.45□□□□□ -0.9
LINC00239-201ENST00000556973 IFI44LQ53G44 452 aa9.45□□□□□ -0.9
LINC00239-201ENST00000556973 SAMD4BQ5PRF9 694 aaKnown RBP9.45□□□□□ -0.9
LINC00239-201ENST00000556973 FBXW10Q5XX13 1052 aa9.45□□□□□ -0.9
LINC00239-201ENST00000556973 CASP12Q6UXS9 341 aa9.45□□□□□ -0.9
LINC00239-201ENST00000556973 WDR88Q6ZMY6 472 aa9.45□□□□□ -0.9
LINC00239-201ENST00000556973 DEF8Q6ZN54 512 aa9.45□□□□□ -0.9
LINC00239-201ENST00000556973 AAED1Q7RTV5 226 aa9.45□□□□□ -0.9
LINC00239-201ENST00000556973 VTCN1Q7Z7D3 282 aa9.45□□□□□ -0.9
LINC00239-201ENST00000556973 TSPYL5Q86VY4 417 aaPredicted RBP9.45□□□□□ -0.9
LINC00239-201ENST00000556973 EPHX4Q8IUS5 362 aa9.45□□□□□ -0.9
LINC00239-201ENST00000556973 KDM8Q8N371 416 aa9.45□□□□□ -0.9
LINC00239-201ENST00000556973 C10orf53Q8N6V4 93 aa9.45□□□□□ -0.9
LINC00239-201ENST00000556973 RNF148Q8N7C7 305 aa9.45□□□□□ -0.9
LINC00239-201ENST00000556973 ZIC4Q8N9L1 334 aa9.45□□□□□ -0.9
LINC00239-201ENST00000556973 SCAIQ8N9R8 606 aa9.45□□□□□ -0.9
LINC00239-201ENST00000556973 ADPRHL1Q8NDY3 354 aa9.45□□□□□ -0.9
LINC00239-201ENST00000556973 HSD17B8Q92506 261 aa9.45□□□□□ -0.9
LINC00239-201ENST00000556973 KISS1RQ969F8 398 aaPredicted RBP9.45□□□□□ -0.9
LINC00239-201ENST00000556973 HS6ST2Q96MM7 605 aa9.45□□□□□ -0.9
LINC00239-201ENST00000556973 ZNF426Q9BUY5 554 aa9.45□□□□□ -0.9
LINC00239-201ENST00000556973 AMBRA1Q9C0C7 1298 aa9.45□□□□□ -0.9
LINC00239-201ENST00000556973 ACTR6Q9GZN1 396 aa9.45□□□□□ -0.9
LINC00239-201ENST00000556973 CLEC4MQ9H2X3 399 aaPredicted RBP9.45□□□□□ -0.9
LINC00239-201ENST00000556973 ASB6Q9NWX5 421 aa9.45□□□□□ -0.9
LINC00239-201ENST00000556973 MRPL39Q9NYK5 338 aaKnown RBP9.45□□□□□ -0.9
LINC00239-201ENST00000556973 UPB1Q9UBR1 384 aa9.45□□□□□ -0.9
LINC00239-201ENST00000556973 SAMD4AQ9UPU9 718 aaKnown RBP9.45□□□□□ -0.9
LINC00239-201ENST00000556973 HTR3EA5X5Y0 456 aa9.44□□□□□ -0.9
LINC00239-201ENST00000556973 OR6C65A6NJZ3 312 aa9.44□□□□□ -0.9
LINC00239-201ENST00000556973 M0R082 166 aa9.44□□□□□ -0.9
LINC00239-201ENST00000556973 IGF2P01344 180 aa9.44□□□□□ -0.9
LINC00239-201ENST00000556973 IGHV3-9P01782 118 aa9.44□□□□□ -0.9
LINC00239-201ENST00000556973 MT-ND1P03886 318 aa9.44□□□□□ -0.9
LINC00239-201ENST00000556973 HIST1H2ABP04908 130 aa9.44□□□□□ -0.9
LINC00239-201ENST00000556973 NQO1P15559 274 aaKnown RBP9.44□□□□□ -0.9
LINC00239-201ENST00000556973 TCN1P20061 433 aaPredicted RBP9.44□□□□□ -0.9
LINC00239-201ENST00000556973 CALB2P22676 271 aa9.44□□□□□ -0.9
LINC00239-201ENST00000556973 IGHV1-2P23083 117 aa9.44□□□□□ -0.9
LINC00239-201ENST00000556973 EDNRAP25101 427 aa9.44□□□□□ -0.9
LINC00239-201ENST00000556973 GRPRP30550 384 aa9.44□□□□□ -0.9
LINC00239-201ENST00000556973 CCKARP32238 428 aa9.44□□□□□ -0.9
LINC00239-201ENST00000556973 FAPQ12884 760 aa9.44□□□□□ -0.9
LINC00239-201ENST00000556973 PMS2P3Q13401 168 aa9.44□□□□□ -0.9
LINC00239-201ENST00000556973 FXNQ16595 210 aa9.44□□□□□ -0.9
LINC00239-201ENST00000556973 C22orf34Q6ZV56 151 aa9.44□□□□□ -0.9
LINC00239-201ENST00000556973 HIST3H2AQ7L7L0 130 aa9.44□□□□□ -0.9
LINC00239-201ENST00000556973 BHLHA15Q7RTS1 189 aaPredicted RBP9.44□□□□□ -0.9
LINC00239-201ENST00000556973 SSX8Q7RTT4 187 aa9.44□□□□□ -0.9
LINC00239-201ENST00000556973 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.44□□□□□ -0.9
LINC00239-201ENST00000556973 P2RY8Q86VZ1 359 aa9.44□□□□□ -0.9
LINC00239-201ENST00000556973 NKAIN4Q8IVV8 208 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms