RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 MFSD8Q8NHS3 518 aa12.12□□□□□ -0.47
PCNX4-209ENST00000555569 STON2Q8WXE9 905 aa12.12□□□□□ -0.47
PCNX4-209ENST00000555569 MAGEB18Q96M61 343 aa12.12□□□□□ -0.47
PCNX4-209ENST00000555569 RSPO3Q9BXY4 272 aaPredicted RBP12.12□□□□□ -0.47
PCNX4-209ENST00000555569 RABEP2Q9H5N1 569 aa12.12□□□□□ -0.47
PCNX4-209ENST00000555569 IKZF5Q9H5V7 419 aa12.12□□□□□ -0.47
PCNX4-209ENST00000555569 TMEM38AQ9H6F2 299 aa12.12□□□□□ -0.47
PCNX4-209ENST00000555569 VIPAS39Q9H9C1 493 aa12.12□□□□□ -0.47
PCNX4-209ENST00000555569 C12orf10Q9HB07 376 aa12.12□□□□□ -0.47
PCNX4-209ENST00000555569 FAIMQ9NVQ4 179 aa12.12□□□□□ -0.47
PCNX4-209ENST00000555569 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.12□□□□□ -0.47
PCNX4-209ENST00000555569 RASD1Q9Y272 281 aa12.12□□□□□ -0.47
PCNX4-209ENST00000555569 A0A1B0GWA3 101 aa12.11□□□□□ -0.47
PCNX4-209ENST00000555569 FTCDNL1E5RQL4 147 aa12.11□□□□□ -0.47
PCNX4-209ENST00000555569 KRT33AO76009 404 aa12.11□□□□□ -0.47
PCNX4-209ENST00000555569 GPX2P18283 190 aa12.11□□□□□ -0.47
PCNX4-209ENST00000555569 SLC6A2P23975 617 aa12.11□□□□□ -0.47
PCNX4-209ENST00000555569 GTF2E2P29084 291 aaKnown RBP12.11□□□□□ -0.47
PCNX4-209ENST00000555569 RPS5P46782 204 aaKnown RBP12.11□□□□□ -0.47
PCNX4-209ENST00000555569 EGR4Q05215 589 aa12.11□□□□□ -0.47
PCNX4-209ENST00000555569 SPOCK1Q08629 439 aa12.11□□□□□ -0.47
PCNX4-209ENST00000555569 TNK1Q13470 666 aa12.11□□□□□ -0.47
PCNX4-209ENST00000555569 SCARB2Q14108 478 aa12.11□□□□□ -0.47
PCNX4-209ENST00000555569 VEZF1Q14119 521 aa12.11□□□□□ -0.47
PCNX4-209ENST00000555569 CLEC12BQ2HXU8 276 aa12.11□□□□□ -0.47
PCNX4-209ENST00000555569 C1QTNF12Q5T7M4 302 aa12.11□□□□□ -0.47
PCNX4-209ENST00000555569 AGAP6Q5VW22 663 aa12.11□□□□□ -0.47
PCNX4-209ENST00000555569 C6orf89Q6UWU4 347 aa12.11□□□□□ -0.47
PCNX4-209ENST00000555569 DLEU7Q6UYE1 221 aa12.11□□□□□ -0.47
PCNX4-209ENST00000555569 CREB3L2Q70SY1 520 aa12.11□□□□□ -0.47
PCNX4-209ENST00000555569 COMTD1Q86VU5 262 aa12.11□□□□□ -0.47
PCNX4-209ENST00000555569 DEPDC4Q8N2C3 294 aa12.11□□□□□ -0.47
PCNX4-209ENST00000555569 SLC25A36Q96CQ1 311 aa12.11□□□□□ -0.47
PCNX4-209ENST00000555569 KTI12Q96EK9 354 aaPredicted RBP12.11□□□□□ -0.47
PCNX4-209ENST00000555569 THOC1Q96FV9 657 aaKnown RBP12.11□□□□□ -0.47
PCNX4-209ENST00000555569 ZNF607Q96SK3 696 aa12.11□□□□□ -0.47
PCNX4-209ENST00000555569 CPPED1Q9BRF8 314 aaPredicted RBP12.11□□□□□ -0.47
PCNX4-209ENST00000555569 PTDSS2Q9BVG9 487 aa12.11□□□□□ -0.47
PCNX4-209ENST00000555569 C1QTNF6Q9BXI9 259 aa12.11□□□□□ -0.47
PCNX4-209ENST00000555569 GRIP2Q9C0E4 1043 aa12.11□□□□□ -0.47
PCNX4-209ENST00000555569 ARGLU1Q9NWB6 273 aaPredicted RBP12.11□□□□□ -0.47
PCNX4-209ENST00000555569 LEF1Q9UJU2 399 aaPredicted RBP12.11□□□□□ -0.47
PCNX4-209ENST00000555569 POU2F3Q9UKI9 436 aa12.11□□□□□ -0.47
PCNX4-209ENST00000555569 CR1P17927 2039 aa12.1□□□□□ -0.47
PCNX4-209ENST00000555569 PRORSD1PA6NEY8 169 aa12.1□□□□□ -0.47
PCNX4-209ENST00000555569 OR6C65A6NJZ3 312 aa12.1□□□□□ -0.47
PCNX4-209ENST00000555569 E7EQL1 145 aa12.1□□□□□ -0.47
PCNX4-209ENST00000555569 TPST1O60507 370 aa12.1□□□□□ -0.47
PCNX4-209ENST00000555569 PNMTP11086 282 aa12.1□□□□□ -0.47
PCNX4-209ENST00000555569 CDH2P19022 906 aaPredicted RBP12.1□□□□□ -0.47
PCNX4-209ENST00000555569 HTR2AP28223 471 aa12.1□□□□□ -0.47
PCNX4-209ENST00000555569 SELENOPP49908 381 aa12.1□□□□□ -0.47
PCNX4-209ENST00000555569 PRPS1P60891 318 aa12.1□□□□□ -0.47
PCNX4-209ENST00000555569 SLC25A3Q00325 362 aa12.1□□□□□ -0.47
PCNX4-209ENST00000555569 ADRM1Q16186 407 aa12.1□□□□□ -0.47
PCNX4-209ENST00000555569 GLIPR1L2Q4G1C9 344 aa12.1□□□□□ -0.47
PCNX4-209ENST00000555569 RUNDC3AQ59EK9 446 aa12.1□□□□□ -0.47
PCNX4-209ENST00000555569 NIPAL3Q6P499 406 aa12.1□□□□□ -0.47
PCNX4-209ENST00000555569 KLHL24Q6TFL4 600 aa12.1□□□□□ -0.47
PCNX4-209ENST00000555569 C5orf46Q6UWT4 87 aa12.1□□□□□ -0.47
PCNX4-209ENST00000555569 B3GLCTQ6Y288 498 aa12.1□□□□□ -0.47
PCNX4-209ENST00000555569 EPHX4Q8IUS5 362 aa12.1□□□□□ -0.47
PCNX4-209ENST00000555569 LSMEM1Q8N8F7 131 aa12.1□□□□□ -0.47
PCNX4-209ENST00000555569 HIPK4Q8NE63 616 aa12.1□□□□□ -0.47
PCNX4-209ENST00000555569 BHLHE22Q8NFJ8 381 aaPredicted RBP12.1□□□□□ -0.47
PCNX4-209ENST00000555569 DNAJA4Q8WW22 397 aaPredicted RBP12.1□□□□□ -0.47
PCNX4-209ENST00000555569 SLC38A4Q969I6 547 aa12.1□□□□□ -0.47
PCNX4-209ENST00000555569 DHRS9Q9BPW9 319 aa12.1□□□□□ -0.47
PCNX4-209ENST00000555569 TESQ9UGI8 421 aaKnown RBP12.1□□□□□ -0.47
PCNX4-209ENST00000555569 ABCA1O95477 2261 aa12.09□□□□□ -0.47
PCNX4-209ENST00000555569 ZNF587BE7ETH6 402 aa12.09□□□□□ -0.47
PCNX4-209ENST00000555569 OR2T1O43869 369 aa12.09□□□□□ -0.47
PCNX4-209ENST00000555569 EDF1O60869 148 aaKnown RBP12.09□□□□□ -0.47
PCNX4-209ENST00000555569 FZD7O75084 574 aa12.09□□□□□ -0.47
PCNX4-209ENST00000555569 NDUFS7O75251 213 aa12.09□□□□□ -0.47
PCNX4-209ENST00000555569 SERPINB7O75635 380 aa12.09□□□□□ -0.47
PCNX4-209ENST00000555569 WNT11O96014 354 aa12.09□□□□□ -0.47
PCNX4-209ENST00000555569 IGHV4-39P01824 125 aa12.09□□□□□ -0.47
PCNX4-209ENST00000555569 H2AFXP16104 143 aaPredicted RBP12.09□□□□□ -0.47
PCNX4-209ENST00000555569 PTNP21246 168 aa12.09□□□□□ -0.47
PCNX4-209ENST00000555569 AQP1P29972 269 aa12.09□□□□□ -0.47
PCNX4-209ENST00000555569 TTKP33981 857 aa12.09□□□□□ -0.47
PCNX4-209ENST00000555569 ACVR1BP36896 505 aa12.09□□□□□ -0.47
PCNX4-209ENST00000555569 NCALDP61601 193 aa12.09□□□□□ -0.47
PCNX4-209ENST00000555569 LGALS3BPQ08380 585 aa12.09□□□□□ -0.47
PCNX4-209ENST00000555569 ALG10BQ5I7T1 473 aa12.09□□□□□ -0.47
PCNX4-209ENST00000555569 DHDDSQ86SQ9 333 aa12.09□□□□□ -0.47
PCNX4-209ENST00000555569 FBXL14Q8N1E6 418 aa12.09□□□□□ -0.47
PCNX4-209ENST00000555569 KDM8Q8N371 416 aa12.09□□□□□ -0.47
PCNX4-209ENST00000555569 BOD1Q96IK1 185 aa12.09□□□□□ -0.47
PCNX4-209ENST00000555569 HS6ST2Q96MM7 605 aa12.09□□□□□ -0.47
PCNX4-209ENST00000555569 PRR14Q9BWN1 585 aa12.09□□□□□ -0.47
PCNX4-209ENST00000555569 ZNF385DQ9H6B1 395 aa12.09□□□□□ -0.47
PCNX4-209ENST00000555569 FKRPQ9H9S5 495 aa12.09□□□□□ -0.47
PCNX4-209ENST00000555569 BARX1Q9HBU1 254 aaPredicted RBP12.09□□□□□ -0.47
PCNX4-209ENST00000555569 NPHS2Q9NP85 383 aa12.09□□□□□ -0.47
PCNX4-209ENST00000555569 CBLN4Q9NTU7 201 aa12.09□□□□□ -0.47
PCNX4-209ENST00000555569 SELENONQ9NZV5 590 aa12.09□□□□□ -0.47
PCNX4-209ENST00000555569 GDF2Q9UK05 429 aaPredicted RBP12.09□□□□□ -0.47
PCNX4-209ENST00000555569 SLC13A4Q9UKG4 626 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms