RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 CNIH3Q8TBE1 160 aa9.67□□□□□ -0.86
TDP1-211ENST00000555178 TEX47Q8TBZ9 253 aa9.67□□□□□ -0.86
TDP1-211ENST00000555178 PNPLA2Q96AD5 504 aa9.67□□□□□ -0.86
TDP1-211ENST00000555178 SFXN2Q96NB2 322 aa9.67□□□□□ -0.86
TDP1-211ENST00000555178 OR5B2Q96R09 309 aa9.67□□□□□ -0.86
TDP1-211ENST00000555178 TSSK6Q9BXA6 273 aa9.67□□□□□ -0.86
TDP1-211ENST00000555178 SLC25A18Q9H1K4 315 aa9.67□□□□□ -0.86
TDP1-211ENST00000555178 ADNPQ9H2P0 1102 aa9.67□□□□□ -0.86
TDP1-211ENST00000555178 IL20Q9NYY1 176 aa9.67□□□□□ -0.86
TDP1-211ENST00000555178 PCDHGB7Q9Y5F8 929 aa9.67□□□□□ -0.86
TDP1-211ENST00000555178 M0R082 166 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 CDK2AP1O14519 115 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 TFECO14948 347 aaPredicted RBP9.66□□□□□ -0.86
TDP1-211ENST00000555178 SEC14L5O43304 696 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 ZNF208O43345 1280 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 AHSA1O95433 338 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 RPSAP08865 295 aaKnown RBP9.66□□□□□ -0.86
TDP1-211ENST00000555178 GRPRP30550 384 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 GGT2P36268 569 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 RPS4XP62701 263 aaKnown RBP9.66□□□□□ -0.86
TDP1-211ENST00000555178 FOXK2Q01167 660 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 IL5RAQ01344 420 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 CD47Q08722 323 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 SLC10A1Q14973 349 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 ZBED5Q49AG3 693 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 FAM69AQ5T7M9 428 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 TTC23Q5W5X9 447 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 LAIR2Q6ISS4 152 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 SMARCD3Q6STE5 483 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 BCDIN3DQ7Z5W3 292 aaKnown RBP9.66□□□□□ -0.86
TDP1-211ENST00000555178 SLC22A16Q86VW1 577 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 WDFY1Q8IWB7 410 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 ENTHD1Q8IYW4 607 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 KDM8Q8N371 416 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 MARVELD2Q8N4S9 558 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 ZNF417Q8TAU3 575 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 STK35Q8TDR2 534 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 DDIT4LQ96D03 193 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 SNRNP40Q96DI7 357 aaKnown RBP9.66□□□□□ -0.86
TDP1-211ENST00000555178 ZNF587Q96SQ5 575 aaPredicted RBP9.66□□□□□ -0.86
TDP1-211ENST00000555178 PIGQQ9BRB3 760 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 ASF1BQ9NVP2 202 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 RALYQ9UKM9 306 aaKnown RBP9.66□□□□□ -0.86
TDP1-211ENST00000555178 RNF6Q9Y252 685 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 ADAM18Q9Y3Q7 739 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 ARHGAP21Q5T5U3 1957 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 IGHV3-15A0A0B4J1V0 119 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 TNFSF11O14788 317 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 SERPINI2O75830 405 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 SMNDC1O75940 238 aaKnown RBP eCLIP9.66□□□□□ -0.86
TDP1-211ENST00000555178 PPP1R3DO95685 299 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 F13BP05160 661 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 ZNF17P17021 662 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 ADH6P28332 368 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 GIPRP48546 466 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 LHX2P50458 406 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 ISL1P61371 349 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 CDK5Q00535 292 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 SRYQ05066 204 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 KEAP1Q14145 624 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 SMN1Q16637 294 aaKnown RBP9.66□□□□□ -0.86
TDP1-211ENST00000555178 ZNF324BQ6AW86 544 aaPredicted RBP9.66□□□□□ -0.86
TDP1-211ENST00000555178 CCDC103Q8IW40 242 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 C8orf59Q8N0T1 100 aaPredicted RBP9.66□□□□□ -0.86
TDP1-211ENST00000555178 APH1BQ8WW43 257 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 ZNF845Q96IR2 970 aaPredicted RBP9.66□□□□□ -0.86
TDP1-211ENST00000555178 IL4I1Q96RQ9 567 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 SRXN1Q9BYN0 137 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 Q9H521 79 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 HHATLQ9HCP6 504 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 ZNF226Q9NYT6 803 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 TVP23BQ9NYZ1 205 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 B4GALT7Q9UBV7 327 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 TUBD1Q9UJT1 453 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 GPR52Q9Y2T5 361 aa9.66□□□□□ -0.86
TDP1-211ENST00000555178 DOCK7Q96N67 2140 aa9.65□□□□□ -0.86
TDP1-211ENST00000555178 PCNX1Q96RV3 2341 aa9.65□□□□□ -0.86
TDP1-211ENST00000555178 LIPT2A6NK58 231 aa9.65□□□□□ -0.86
TDP1-211ENST00000555178 C11orf98E9PRG8 122 aa9.65□□□□□ -0.86
TDP1-211ENST00000555178 BHLHE40O14503 412 aa9.65□□□□□ -0.86
TDP1-211ENST00000555178 IMPA2O14732 288 aa9.65□□□□□ -0.86
TDP1-211ENST00000555178 PRKYO43930 277 aa9.65□□□□□ -0.86
TDP1-211ENST00000555178 HCN1O60741 890 aa9.65□□□□□ -0.86
TDP1-211ENST00000555178 AKR7A3O95154 331 aa9.65□□□□□ -0.86
TDP1-211ENST00000555178 PLGP00747 810 aaPredicted RBP9.65□□□□□ -0.86
TDP1-211ENST00000555178 UQCRC1P31930 480 aa9.65□□□□□ -0.86
TDP1-211ENST00000555178 IDUAP35475 653 aa9.65□□□□□ -0.86
TDP1-211ENST00000555178 CLDN18P56856 261 aa9.65□□□□□ -0.86
TDP1-211ENST00000555178 MYBPC1Q00872 1141 aa9.65□□□□□ -0.86
TDP1-211ENST00000555178 RPL18Q07020 188 aaKnown RBP9.65□□□□□ -0.86
TDP1-211ENST00000555178 SLC35F1Q5T1Q4 408 aa9.65□□□□□ -0.86
TDP1-211ENST00000555178 SLX4IPQ5VYV7 408 aa9.65□□□□□ -0.86
TDP1-211ENST00000555178 C12orf73Q69YU5 71 aa9.65□□□□□ -0.86
TDP1-211ENST00000555178 RPUSD3Q6P087 351 aaKnown RBP9.65□□□□□ -0.86
TDP1-211ENST00000555178 SLC27A4Q6P1M0 643 aa9.65□□□□□ -0.86
TDP1-211ENST00000555178 UGT2A3Q6UWM9 527 aa9.65□□□□□ -0.86
TDP1-211ENST00000555178 NANOGNBQ7Z5D8 188 aa9.65□□□□□ -0.86
TDP1-211ENST00000555178 TEX19Q8NA77 164 aa9.65□□□□□ -0.86
TDP1-211ENST00000555178 NEIL3Q8TAT5 605 aa9.65□□□□□ -0.86
TDP1-211ENST00000555178 RHNO1Q9BSD3 238 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms