RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 ARHGAP11AQ6P4F7 1023 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 ZNF517Q6ZMY9 492 aaPredicted RBP11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 RASL10BQ96S79 203 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 EDEM2Q9BV94 578 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 DEFB126Q9BYW3 111 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 WDR54Q9H977 334 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 ADGRL4Q9HBW9 690 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 NRIP3Q9NQ35 241 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 NDUFB11Q9NX14 153 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 TAS2R10Q9NYW0 307 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 KLRF1Q9NZS2 232 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 C19orf25Q9UFG5 118 aaPredicted RBP11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 EXOSC1Q9Y3B2 195 aaKnown RBP11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 TMED7Q9Y3B3 224 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 TMEM129A0AVI4 362 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 C9J4A7 227 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 PLD2O14939 933 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 CBFA2T3O75081 653 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 PLGP00747 810 aaPredicted RBP11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 OPN1LWP04000 364 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 TSPAN19P0C672 248 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 CCKBRP32239 447 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 IDUAP35475 653 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 NAA10P41227 235 aaPredicted RBP11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 CDKN2AP42771 156 aaKnown RBP11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 CTXN1P60606 82 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 PRAMEF20Q5VT98 475 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 OTPQ5XKR4 325 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 RAB11FIP2Q7L804 512 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 KLBQ86Z14 1044 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 ARHGAP9Q9BRR9 750 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 PTDSS2Q9BVG9 487 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 SLC19A3Q9BZV2 496 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 PCDHGB2Q9Y5G2 931 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 SIRT4Q9Y6E7 314 aaPredicted RBP11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 LCN1P31025 176 aa11.55□□□□□ -0.56
VIPAS39-206ENST00000553888 PTGDSP41222 190 aa11.55□□□□□ -0.56
VIPAS39-206ENST00000553888 DCTN2Q13561 401 aaKnown RBP11.55□□□□□ -0.56
VIPAS39-206ENST00000553888 DGUOKQ16854 277 aa11.55□□□□□ -0.56
VIPAS39-206ENST00000553888 ALG10Q5BKT4 473 aa11.55□□□□□ -0.56
VIPAS39-206ENST00000553888 DCAF12Q5T6F0 453 aa11.55□□□□□ -0.56
VIPAS39-206ENST00000553888 MARCH9Q86YJ5 346 aa11.55□□□□□ -0.56
VIPAS39-206ENST00000553888 LRRC75AQ8NAA5 344 aa11.55□□□□□ -0.56
VIPAS39-206ENST00000553888 SYT14Q8NB59 555 aa11.55□□□□□ -0.56
VIPAS39-206ENST00000553888 NPEPL1Q8NDH3 523 aa11.55□□□□□ -0.56
VIPAS39-206ENST00000553888 OR5M1Q8NGP8 315 aa11.55□□□□□ -0.56
VIPAS39-206ENST00000553888 ELP5Q8TE02 316 aa11.55□□□□□ -0.56
VIPAS39-206ENST00000553888 LOXL4Q96JB6 756 aa11.55□□□□□ -0.56
VIPAS39-206ENST00000553888 ZNF160Q9HCG1 818 aa11.55□□□□□ -0.56
VIPAS39-206ENST00000553888 ITGA10O75578 1167 aa11.55□□□□□ -0.56
VIPAS39-206ENST00000553888 BGLAPP02818 100 aa11.55□□□□□ -0.56
VIPAS39-206ENST00000553888 CPEP16870 476 aa11.55□□□□□ -0.56
VIPAS39-206ENST00000553888 GRPRP30550 384 aa11.55□□□□□ -0.56
VIPAS39-206ENST00000553888 PYCR1P32322 319 aa11.55□□□□□ -0.56
VIPAS39-206ENST00000553888 MXD1Q05195 221 aa11.55□□□□□ -0.56
VIPAS39-206ENST00000553888 MOGQ16653 247 aa11.55□□□□□ -0.56
VIPAS39-206ENST00000553888 DHRS13Q6UX07 377 aa11.55□□□□□ -0.56
VIPAS39-206ENST00000553888 DPY19L2P2Q6ZN68 376 aa11.55□□□□□ -0.56
VIPAS39-206ENST00000553888 USP43Q70EL4 1123 aa11.55□□□□□ -0.56
VIPAS39-206ENST00000553888 OIT3Q8WWZ8 545 aa11.55□□□□□ -0.56
VIPAS39-206ENST00000553888 ALG8Q9BVK2 526 aa11.55□□□□□ -0.56
VIPAS39-206ENST00000553888 FOXJ2Q9P0K8 574 aa11.55□□□□□ -0.56
VIPAS39-206ENST00000553888 PFDN2Q9UHV9 154 aa11.55□□□□□ -0.56
VIPAS39-206ENST00000553888 HIF3AQ9Y2N7 669 aa11.55□□□□□ -0.56
VIPAS39-206ENST00000553888 LOC400499M0QZD8 3231 aa11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 LOC102723996A0A087X1L8 192 aa11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 E9PI62 339 aa11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 ZNF254O75437 659 aa11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 TFP02787 698 aa11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 UQCRC1P31930 480 aa11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 EFR3AQ14156 821 aa11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 ISXQ2M1V0 245 aa11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 C22orf42Q6IC83 251 aa11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 LEG1Q6P5S2 330 aa11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 ZNF322Q6U7Q0 402 aaPredicted RBP11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 IL20RBQ6UXL0 311 aa11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 KDM8Q8N371 416 aa11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 NLGN4YQ8NFZ3 816 aaPredicted RBP11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 OR11G2Q8NGC1 345 aa11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 OR5L2Q8NGL0 311 aa11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 OR2Y1Q8NGV0 311 aa11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 SMPDL3BQ92485 455 aa11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 TMCO6Q96DC7 493 aa11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 TMED9Q9BVK6 235 aa11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 CDADC1Q9BWV3 514 aa11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 MARCH7Q9H992 704 aa11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 RPRD1BQ9NQG5 326 aaKnown RBP11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 BAIAP2Q9UQB8 552 aa11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 DAPL1A0PJW8 107 aa11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 IRGMA1A4Y4 181 aa11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 G3V3Y1 287 aa11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 DCTN6O00399 190 aa11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 SELENOFO60613 162 aa11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 SLC25A12O75746 678 aa11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 GPANK1O95872 356 aa11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 IFNGP01579 166 aa11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 SBK2P0C263 348 aa11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 CLEC2LP0C7M8 214 aa11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 CELP19835 753 aa11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 OTX2P32243 289 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms