RNA–Protein interactions for RNA: ENST00000553651.1

CHD8-205, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 291 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-205ENST00000553651 SYT3Q9BQG1 590 aa8.2□□□□□ -1.1
CHD8-205ENST00000553651 MMP27Q9H306 513 aa8.2□□□□□ -1.1
CHD8-205ENST00000553651 TUBB1Q9H4B7 451 aa8.2□□□□□ -1.1
CHD8-205ENST00000553651 B3GNT2Q9NY97 397 aa8.2□□□□□ -1.1
CHD8-205ENST00000553651 ZNF180Q9UJW8 692 aa8.2□□□□□ -1.1
CHD8-205ENST00000553651 FAF1Q9UNN5 650 aaPredicted RBP8.2□□□□□ -1.1
CHD8-205ENST00000553651 TENM3Q9P273 2699 aa8.19□□□□□ -1.1
CHD8-205ENST00000553651 SCAMP2O15127 329 aaKnown RBP8.19□□□□□ -1.1
CHD8-205ENST00000553651 STX11O75558 287 aa8.19□□□□□ -1.1
CHD8-205ENST00000553651 ZNF432O94892 652 aa8.19□□□□□ -1.1
CHD8-205ENST00000553651 C6orf47O95873 294 aa8.19□□□□□ -1.1
CHD8-205ENST00000553651 NAT2P11245 290 aa8.19□□□□□ -1.1
CHD8-205ENST00000553651 GATA3P23771 443 aa8.19□□□□□ -1.1
CHD8-205ENST00000553651 GLRXP35754 106 aa8.19□□□□□ -1.1
CHD8-205ENST00000553651 ARR3P36575 388 aa8.19□□□□□ -1.1
CHD8-205ENST00000553651 PAFAH1B1P43034 410 aa8.19□□□□□ -1.1
CHD8-205ENST00000553651 MAGEB1P43366 347 aa8.19□□□□□ -1.1
CHD8-205ENST00000553651 IDH2P48735 452 aaKnown RBP8.19□□□□□ -1.1
CHD8-205ENST00000553651 SH3BGRP55822 239 aaPredicted RBP8.19□□□□□ -1.1
CHD8-205ENST00000553651 KRTAP10-3P60369 221 aa8.19□□□□□ -1.1
CHD8-205ENST00000553651 ETF1P62495 437 aaKnown RBP8.19□□□□□ -1.1
CHD8-205ENST00000553651 ROR2Q01974 943 aaKnown RBP8.19□□□□□ -1.1
CHD8-205ENST00000553651 MVKQ03426 396 aa8.19□□□□□ -1.1
CHD8-205ENST00000553651 FUT5Q11128 374 aa8.19□□□□□ -1.1
CHD8-205ENST00000553651 NPRL3Q12980 569 aa8.19□□□□□ -1.1
CHD8-205ENST00000553651 CEACAM7Q14002 265 aa8.19□□□□□ -1.1
CHD8-205ENST00000553651 LIPMQ5VYY2 423 aa8.19□□□□□ -1.1
CHD8-205ENST00000553651 CLEC6AQ6EIG7 209 aa8.19□□□□□ -1.1
CHD8-205ENST00000553651 TYW3Q6IPR3 259 aaKnown RBP8.19□□□□□ -1.1
CHD8-205ENST00000553651 TIFABQ6ZNK6 161 aa8.19□□□□□ -1.1
CHD8-205ENST00000553651 FRMD7Q6ZUT3 714 aa8.19□□□□□ -1.1
CHD8-205ENST00000553651 C1QL4Q86Z23 238 aa8.19□□□□□ -1.1
CHD8-205ENST00000553651 RELL1Q8IUW5 271 aa8.19□□□□□ -1.1
CHD8-205ENST00000553651 DEFB108BQ8NET1 73 aa8.19□□□□□ -1.1
CHD8-205ENST00000553651 SPATA4Q8NEY3 305 aa8.19□□□□□ -1.1
CHD8-205ENST00000553651 ANKK1Q8NFD2 765 aa8.19□□□□□ -1.1
CHD8-205ENST00000553651 IL17RDQ8NFM7 739 aa8.19□□□□□ -1.1
CHD8-205ENST00000553651 OR5AK3PQ8NH89 298 aa8.19□□□□□ -1.1
CHD8-205ENST00000553651 ZNF563Q8TA94 476 aa8.19□□□□□ -1.1
CHD8-205ENST00000553651 CNOT9Q92600 299 aaKnown RBP8.19□□□□□ -1.1
CHD8-205ENST00000553651 PMM1Q92871 262 aa8.19□□□□□ -1.1
CHD8-205ENST00000553651 DDIT4LQ96D03 193 aa8.19□□□□□ -1.1
CHD8-205ENST00000553651 MS4A3Q96HJ5 214 aa8.19□□□□□ -1.1
CHD8-205ENST00000553651 ZNF385DQ9H6B1 395 aa8.19□□□□□ -1.1
CHD8-205ENST00000553651 CRLF2Q9HC73 371 aa8.19□□□□□ -1.1
CHD8-205ENST00000553651 EXOSC3Q9NQT5 275 aaKnown RBP8.19□□□□□ -1.1
CHD8-205ENST00000553651 OXSMQ9NWU1 459 aa8.19□□□□□ -1.1
CHD8-205ENST00000553651 EMCNQ9ULC0 261 aa8.19□□□□□ -1.1
CHD8-205ENST00000553651 SLC35A3Q9Y2D2 325 aa8.19□□□□□ -1.1
CHD8-205ENST00000553651 G3V2L1 256 aa8.18□□□□□ -1.1
CHD8-205ENST00000553651 LSM1O15116 133 aaKnown RBP8.18□□□□□ -1.1
CHD8-205ENST00000553651 KRT33AO76009 404 aa8.18□□□□□ -1.1
CHD8-205ENST00000553651 AK1P00568 194 aa8.18□□□□□ -1.1
CHD8-205ENST00000553651 GUSBP08236 651 aa8.18□□□□□ -1.1
CHD8-205ENST00000553651 ZNF14P17017 642 aaPredicted RBP8.18□□□□□ -1.1
CHD8-205ENST00000553651 OMGP23515 440 aa8.18□□□□□ -1.1
CHD8-205ENST00000553651 GCAP28676 217 aa8.18□□□□□ -1.1
CHD8-205ENST00000553651 TACR3P29371 465 aa8.18□□□□□ -1.1
CHD8-205ENST00000553651 POLR2HP52434 150 aaKnown RBP8.18□□□□□ -1.1
CHD8-205ENST00000553651 RPL38P63173 70 aaKnown RBP8.18□□□□□ -1.1
CHD8-205ENST00000553651 C2orf54Q08AI8 447 aa8.18□□□□□ -1.1
CHD8-205ENST00000553651 BAMBIQ13145 260 aa8.18□□□□□ -1.1
CHD8-205ENST00000553651 REP15Q6BDI9 236 aa8.18□□□□□ -1.1
CHD8-205ENST00000553651 NIPAL3Q6P499 406 aa8.18□□□□□ -1.1
CHD8-205ENST00000553651 RBMS3Q6XE24 437 aaKnown RBP8.18□□□□□ -1.1
CHD8-205ENST00000553651 FRRS1Q6ZNA5 592 aa8.18□□□□□ -1.1
CHD8-205ENST00000553651 RNF165Q6ZSG1 346 aa8.18□□□□□ -1.1
CHD8-205ENST00000553651 HMGN2P46Q86SG4 172 aa8.18□□□□□ -1.1
CHD8-205ENST00000553651 CCNYL1Q8N7R7 359 aa8.18□□□□□ -1.1
CHD8-205ENST00000553651 BHLHE22Q8NFJ8 381 aaPredicted RBP8.18□□□□□ -1.1
CHD8-205ENST00000553651 OIT3Q8WWZ8 545 aa8.18□□□□□ -1.1
CHD8-205ENST00000553651 TMIGD2Q96BF3 282 aa8.18□□□□□ -1.1
CHD8-205ENST00000553651 COQ8BQ96D53 544 aa8.18□□□□□ -1.1
CHD8-205ENST00000553651 RAB39BQ96DA2 213 aa8.18□□□□□ -1.1
CHD8-205ENST00000553651 PLEK2Q9NYT0 353 aa8.18□□□□□ -1.1
CHD8-205ENST00000553651 NUP50Q9UKX7 468 aa8.18□□□□□ -1.1
CHD8-205ENST00000553651 FZR1Q9UM11 496 aa8.18□□□□□ -1.1
CHD8-205ENST00000553651 UTP11Q9Y3A2 253 aaKnown RBP8.18□□□□□ -1.1
CHD8-205ENST00000553651 WIPI2Q9Y4P8 454 aa8.18□□□□□ -1.1
CHD8-205ENST00000553651 SOX21Q9Y651 276 aaPredicted RBP8.18□□□□□ -1.1
CHD8-205ENST00000553651 PPIAL4EA0A075B759 164 aa8.17□□□□□ -1.1
CHD8-205ENST00000553651 PPIAL4CA0A0B4J2A2 164 aa8.17□□□□□ -1.1
CHD8-205ENST00000553651 PRAMEF27A3QJZ7 478 aa8.17□□□□□ -1.1
CHD8-205ENST00000553651 PPIAL4DF5H284 164 aa8.17□□□□□ -1.1
CHD8-205ENST00000553651 SLC28A1O00337 649 aa8.17□□□□□ -1.1
CHD8-205ENST00000553651 FAAHO00519 579 aa8.17□□□□□ -1.1
CHD8-205ENST00000553651 TRAF3IP2O43734 574 aaPredicted RBP8.17□□□□□ -1.1
CHD8-205ENST00000553651 CDC14BO60729 498 aa8.17□□□□□ -1.1
CHD8-205ENST00000553651 GPIP06744 558 aa8.17□□□□□ -1.1
CHD8-205ENST00000553651 SNRPAP09012 282 aaKnown RBP8.17□□□□□ -1.1
CHD8-205ENST00000553651 PPIAL4FP0DN26 164 aa8.17□□□□□ -1.1
CHD8-205ENST00000553651 UROSP10746 265 aa8.17□□□□□ -1.1
CHD8-205ENST00000553651 PHBP35232 272 aa8.17□□□□□ -1.1
CHD8-205ENST00000553651 HTR3AP46098 478 aa8.17□□□□□ -1.1
CHD8-205ENST00000553651 MAP2K6P52564 334 aa8.17□□□□□ -1.1
CHD8-205ENST00000553651 HBA1P69905 142 aa8.17□□□□□ -1.1
CHD8-205ENST00000553651 KCNJ10P78508 379 aa8.17□□□□□ -1.1
CHD8-205ENST00000553651 OR7A5Q15622 319 aa8.17□□□□□ -1.1
CHD8-205ENST00000553651 SAXO2Q658L1 398 aa8.17□□□□□ -1.1
CHD8-205ENST00000553651 ASPHD2Q6ICH7 369 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms