RNA–Protein interactions for RNA: ENST00000549414.6

CUX1-213, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-213ENST00000549414 BRCA1P38398 1863 aaKnown RBP15.01□□□□□ -0.01
CUX1-213ENST00000549414 AKAP6Q13023 2319 aa15□□□□□ -0.01
CUX1-213ENST00000549414 TSPAN4O14817 238 aa15□□□□□ -0.01
CUX1-213ENST00000549414 NARSO43776 548 aaKnown RBP15□□□□□ -0.01
CUX1-213ENST00000549414 MFSD13AQ14CX5 517 aa15□□□□□ -0.01
CUX1-213ENST00000549414 C14orf28Q4W4Y0 310 aa15□□□□□ -0.01
CUX1-213ENST00000549414 SPIN3Q5JUX0 258 aa15□□□□□ -0.01
CUX1-213ENST00000549414 FBXO42Q6P3S6 717 aa15□□□□□ -0.01
CUX1-213ENST00000549414 CA13Q8N1Q1 262 aa15□□□□□ -0.01
CUX1-213ENST00000549414 TSSK2Q96PF2 358 aa15□□□□□ -0.01
CUX1-213ENST00000549414 ARL6Q9H0F7 186 aa15□□□□□ -0.01
CUX1-213ENST00000549414 C11orf54Q9H0W9 315 aaPredicted RBP15□□□□□ -0.01
CUX1-213ENST00000549414 ANKRD19PQ9H560 264 aa15□□□□□ -0.01
CUX1-213ENST00000549414 VSX1Q9NZR4 365 aaPredicted RBP15□□□□□ -0.01
CUX1-213ENST00000549414 MGAT4AQ9UM21 535 aa15□□□□□ -0.01
CUX1-213ENST00000549414 A4GNTQ9UNA3 340 aa15□□□□□ -0.01
CUX1-213ENST00000549414 GPR55Q9Y2T6 319 aaPredicted RBP15□□□□□ -0.01
CUX1-213ENST00000549414 RNF215Q9Y6U7 377 aa15□□□□□ -0.01
CUX1-213ENST00000549414 CACNA1HO95180 2353 aa15□□□□□ -0.01
CUX1-213ENST00000549414 ANKRD61A6NGH8 418 aa15□□□□□ -0.01
CUX1-213ENST00000549414 MPIG6BO95866 241 aa15□□□□□ -0.01
CUX1-213ENST00000549414 DLX2Q07687 328 aaPredicted RBP15□□□□□ -0.01
CUX1-213ENST00000549414 KCNJ8Q15842 424 aa15□□□□□ -0.01
CUX1-213ENST00000549414 SLC22A10Q63ZE4 541 aa15□□□□□ -0.01
CUX1-213ENST00000549414 SFXN4Q6P4A7 337 aa15□□□□□ -0.01
CUX1-213ENST00000549414 CADM3Q8N126 398 aa15□□□□□ -0.01
CUX1-213ENST00000549414 FTMTQ8N4E7 242 aa15□□□□□ -0.01
CUX1-213ENST00000549414 CLDN22Q8N7P3 220 aa15□□□□□ -0.01
CUX1-213ENST00000549414 ZSCAN1Q8NBB4 408 aa15□□□□□ -0.01
CUX1-213ENST00000549414 ZNF417Q8TAU3 575 aa15□□□□□ -0.01
CUX1-213ENST00000549414 ZFPM2Q8WW38 1151 aa15□□□□□ -0.01
CUX1-213ENST00000549414 TMEM106AQ96A25 262 aa15□□□□□ -0.01
CUX1-213ENST00000549414 SLC25A44Q96H78 314 aaPredicted RBP15□□□□□ -0.01
CUX1-213ENST00000549414 TRBV5-3A0A0A0MS03 114 aa15□□□□□ -0.01
CUX1-213ENST00000549414 TMEM269A0A1B0GVZ9 245 aa15□□□□□ -0.01
CUX1-213ENST00000549414 SBK2P0C263 348 aa15□□□□□ -0.01
CUX1-213ENST00000549414 OR2T7P0C7T2 308 aa15□□□□□ -0.01
CUX1-213ENST00000549414 ERP29P30040 261 aaKnown RBP15□□□□□ -0.01
CUX1-213ENST00000549414 AWAT2Q6E213 333 aa15□□□□□ -0.01
CUX1-213ENST00000549414 OR2T27Q8NH04 317 aa15□□□□□ -0.01
CUX1-213ENST00000549414 COQ8AQ8NI60 647 aa15□□□□□ -0.01
CUX1-213ENST00000549414 LGALS14Q8TCE9 139 aa15□□□□□ -0.01
CUX1-213ENST00000549414 YIPF6Q96EC8 236 aa15□□□□□ -0.01
CUX1-213ENST00000549414 CCDC88CQ9P219 2028 aa15□□□□□ -0.01
CUX1-213ENST00000549414 ZNF593O00488 134 aaPredicted RBP15□□□□□ -0.01
CUX1-213ENST00000549414 PPP1CAP62136 330 aa15□□□□□ -0.01
CUX1-213ENST00000549414 NR0B2Q15466 257 aa15□□□□□ -0.01
CUX1-213ENST00000549414 RPL22L1Q6P5R6 122 aaKnown RBP15□□□□□ -0.01
CUX1-213ENST00000549414 DHRS4L2Q6PKH6 230 aa15□□□□□ -0.01
CUX1-213ENST00000549414 TMEM92Q6UXU6 159 aa15□□□□□ -0.01
CUX1-213ENST00000549414 BAIAP2L2Q6UXY1 529 aa15□□□□□ -0.01
CUX1-213ENST00000549414 AGBL5Q8NDL9 886 aa15□□□□□ -0.01
CUX1-213ENST00000549414 SLC46A1Q96NT5 459 aa15□□□□□ -0.01
CUX1-213ENST00000549414 STACQ99469 402 aa15□□□□□ -0.01
CUX1-213ENST00000549414 ZNF471Q9BX82 626 aaPredicted RBP15□□□□□ -0.01
CUX1-213ENST00000549414 ULBP3Q9BZM4 244 aa15□□□□□ -0.01
CUX1-213ENST00000549414 SLC6A15Q9H2J7 730 aa15□□□□□ -0.01
CUX1-213ENST00000549414 NOX4Q9NPH5 578 aa15□□□□□ -0.01
CUX1-213ENST00000549414 MRPS2Q9Y399 296 aaKnown RBP15□□□□□ -0.01
CUX1-213ENST00000549414 SCN4AP35499 1836 aa14.99□□□□□ -0.01
CUX1-213ENST00000549414 BRINP1O60477 761 aa14.99□□□□□ -0.01
CUX1-213ENST00000549414 SYNGR4O95473 234 aa14.99□□□□□ -0.01
CUX1-213ENST00000549414 CD14P08571 375 aa14.99□□□□□ -0.01
CUX1-213ENST00000549414 HTR2BP41595 481 aa14.99□□□□□ -0.01
CUX1-213ENST00000549414 ZNF281Q9Y2X9 895 aa14.99□□□□□ -0.01
CUX1-213ENST00000549414 RGPD4Q7Z3J3 1758 aa14.99□□□□□ -0.01
CUX1-213ENST00000549414 A0A1W2PPC4 97 aa14.99□□□□□ -0.01
CUX1-213ENST00000549414 CER1O95813 267 aa14.99□□□□□ -0.01
CUX1-213ENST00000549414 CLUP10909 449 aa14.99□□□□□ -0.01
CUX1-213ENST00000549414 AKR1C4P17516 323 aa14.99□□□□□ -0.01
CUX1-213ENST00000549414 GPR139Q6DWJ6 353 aa14.99□□□□□ -0.01
CUX1-213ENST00000549414 LINC00346Q8IVM7 164 aa14.99□□□□□ -0.01
CUX1-213ENST00000549414 GALNT11Q8NCW6 608 aa14.99□□□□□ -0.01
CUX1-213ENST00000549414 SUN5Q8TC36 379 aa14.99□□□□□ -0.01
CUX1-213ENST00000549414 ZFAND5O76080 213 aa14.99□□□□□ -0.01
CUX1-213ENST00000549414 PRH1P02810 166 aa14.99□□□□□ -0.01
CUX1-213ENST00000549414 HIST1H1CP16403 213 aaKnown RBP14.99□□□□□ -0.01
CUX1-213ENST00000549414 CASP3P42574 277 aa14.99□□□□□ -0.01
CUX1-213ENST00000549414 HSD17B7P56937 341 aa14.99□□□□□ -0.01
CUX1-213ENST00000549414 TFF2Q03403 129 aa14.99□□□□□ -0.01
CUX1-213ENST00000549414 DUSP8Q13202 625 aa14.99□□□□□ -0.01
CUX1-213ENST00000549414 TMEM176BQ3YBM2 270 aaPredicted RBP14.99□□□□□ -0.01
CUX1-213ENST00000549414 CCDC58Q4VC31 144 aa14.99□□□□□ -0.01
CUX1-213ENST00000549414 DEDD2Q8WXF8 326 aa14.99□□□□□ -0.01
CUX1-213ENST00000549414 COX14Q96I36 57 aa14.99□□□□□ -0.01
CUX1-213ENST00000549414 ACTR6Q9GZN1 396 aa14.99□□□□□ -0.01
CUX1-213ENST00000549414 B4GALT7Q9UBV7 327 aa14.99□□□□□ -0.01
CUX1-213ENST00000549414 NOTOA8MTQ0 251 aa14.98□□□□□ -0.01
CUX1-213ENST00000549414 GATBO75879 557 aaKnown RBP14.98□□□□□ -0.01
CUX1-213ENST00000549414 CELA2BP08218 269 aaPredicted RBP14.98□□□□□ -0.01
CUX1-213ENST00000549414 AKR1D1P51857 326 aa14.98□□□□□ -0.01
CUX1-213ENST00000549414 EGFL6Q8IUX8 553 aa14.98□□□□□ -0.01
CUX1-213ENST00000549414 SLC35F3Q8IY50 421 aa14.98□□□□□ -0.01
CUX1-213ENST00000549414 OR14A16Q8NHC5 309 aa14.98□□□□□ -0.01
CUX1-213ENST00000549414 MAFAQ8NHW3 353 aaPredicted RBP14.98□□□□□ -0.01
CUX1-213ENST00000549414 ELP5Q8TE02 316 aa14.98□□□□□ -0.01
CUX1-213ENST00000549414 SFXN2Q96NB2 322 aa14.98□□□□□ -0.01
CUX1-213ENST00000549414 DCBLD2Q96PD2 775 aa14.98□□□□□ -0.01
CUX1-213ENST00000549414 FKBP14Q9NWM8 211 aa14.98□□□□□ -0.01
CUX1-213ENST00000549414 TMED7-TICAM2A0A0A6YYA0 188 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms