RNA–Protein interactions for RNA: ENST00000544455.5

BRCA2-206, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA2, Length 10,984 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-206ENST00000544455 CFAP54Q96N23 3096 aa3.43□□□□□ -1.86
BRCA2-206ENST00000544455 G3V3Y1 287 aa3.43□□□□□ -1.86
BRCA2-206ENST00000544455 EIF1AYO14602 144 aaKnown RBP3.43□□□□□ -1.86
BRCA2-206ENST00000544455 ARHGEF9O43307 516 aa3.43□□□□□ -1.86
BRCA2-206ENST00000544455 NSA2O95478 260 aaKnown RBP3.43□□□□□ -1.86
BRCA2-206ENST00000544455 MYL9P24844 172 aa3.43□□□□□ -1.86
BRCA2-206ENST00000544455 GPR176Q14439 515 aa3.43□□□□□ -1.86
BRCA2-206ENST00000544455 GUSBP11Q6P575 273 aa3.43□□□□□ -1.86
BRCA2-206ENST00000544455 ZNF574Q6ZN55 896 aaPredicted RBP3.43□□□□□ -1.86
BRCA2-206ENST00000544455 DPY19L4Q7Z388 723 aa3.43□□□□□ -1.86
BRCA2-206ENST00000544455 OR51A4Q8NGJ6 313 aa3.43□□□□□ -1.86
BRCA2-206ENST00000544455 ZNF486Q96H40 463 aaPredicted RBP3.43□□□□□ -1.86
BRCA2-206ENST00000544455 THAP7Q9BT49 309 aaPredicted RBP3.43□□□□□ -1.86
BRCA2-206ENST00000544455 SLC22A4Q9H015 551 aa3.43□□□□□ -1.86
BRCA2-206ENST00000544455 NOX4Q9NPH5 578 aa3.43□□□□□ -1.86
BRCA2-206ENST00000544455 ST6GALNAC2Q9UJ37 374 aa3.43□□□□□ -1.86
BRCA2-206ENST00000544455 A0A087WUJ7 227 aa3.43□□□□□ -1.86
BRCA2-206ENST00000544455 ISPDA4D126 451 aa3.43□□□□□ -1.86
BRCA2-206ENST00000544455 OR5K4A6NMS3 321 aa3.43□□□□□ -1.86
BRCA2-206ENST00000544455 F10P00742 488 aa3.43□□□□□ -1.86
BRCA2-206ENST00000544455 TMIGD3P0DMS9 266 aaPredicted RBP3.43□□□□□ -1.86
BRCA2-206ENST00000544455 THBS2P35442 1172 aa3.43□□□□□ -1.86
BRCA2-206ENST00000544455 FMODQ06828 376 aa3.43□□□□□ -1.86
BRCA2-206ENST00000544455 RPL18Q07020 188 aaKnown RBP3.43□□□□□ -1.86
BRCA2-206ENST00000544455 PON3Q15166 354 aa3.43□□□□□ -1.86
BRCA2-206ENST00000544455 LRRN1Q6UXK5 716 aa3.43□□□□□ -1.86
BRCA2-206ENST00000544455 GRPEL2Q8TAA5 225 aa3.43□□□□□ -1.86
BRCA2-206ENST00000544455 LMF2Q9BU23 707 aaKnown RBP3.43□□□□□ -1.86
BRCA2-206ENST00000544455 FGF21Q9NSA1 209 aa3.43□□□□□ -1.86
BRCA2-206ENST00000544455 ELF5Q9UKW6 265 aaPredicted RBP3.43□□□□□ -1.86
BRCA2-206ENST00000544455 IGHV1OR21-1A0A087WYE8 117 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 SCDO00767 359 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 AKR7A3O95154 331 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 BCL2L15Q5TBC7 163 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 HLA-DQA1Q5Y7H0 255 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 TIGD4Q8IY51 512 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 ZNF671Q8TAW3 534 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 SRFP11831 508 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 APEHP13798 732 aaKnown RBP3.42□□□□□ -1.86
BRCA2-206ENST00000544455 ANOS1P23352 680 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 GRK6P43250 576 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 PLCXD2Q0VAA5 305 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 FUT7Q11130 342 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 SKP2Q13309 424 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 TATDN3Q17R31 274 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 ZSWIM7Q19AV6 140 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 RNF113BQ8IZP6 322 aaKnown RBP3.42□□□□□ -1.86
BRCA2-206ENST00000544455 GJD3Q8N144 294 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 YIPF7Q8N8F6 280 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 CCDC74AQ96AQ1 378 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 PHF21AQ96BD5 680 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 LPAR4Q99677 370 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 TMEM246Q9BRR3 403 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 RNF121Q9H920 327 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 UBQLN4Q9NRR5 601 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 MED17Q9NVC6 651 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 KLK2P20151 261 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 MAP2K3P46734 347 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 SIRPAP78324 504 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 TMEM255AQ5JRV8 349 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 MZT2AQ6P582 158 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 LINC00114Q6XXX2 140 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 ZNF595Q8IYB9 648 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 MAFAQ8NHW3 353 aaPredicted RBP3.42□□□□□ -1.86
BRCA2-206ENST00000544455 WDR89Q96FK6 387 aaPredicted RBP3.42□□□□□ -1.86
BRCA2-206ENST00000544455 FRMD6Q96NE9 622 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 OR6C1Q96RD1 312 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 MMP25Q9NPA2 562 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 MED11Q9P086 117 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 CHRNA9Q9UGM1 479 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 PIN1P1O15428 100 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 ZNF217O75362 1048 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 NXPH1P58417 271 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 PPP3R1P63098 170 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 GPLD1P80108 840 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 ALG12Q9BV10 488 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 VN1R1Q9GZP7 353 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 LIN7BQ9HAP6 207 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 OCIAD1Q9NX40 245 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 KLK11Q9UBX7 282 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 DMDP11532 3685 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 IGKV1D-43A0A0B4J1Z2 117 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 LOC101059948A0A1B0GTJ6 334 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 FAM240BA0A1B0GVZ2 78 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 NDUFB5O43674 189 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 SRPX2O60687 465 aaPredicted RBP3.42□□□□□ -1.86
BRCA2-206ENST00000544455 IFNGP01579 166 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 ATF1P18846 271 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 FGF9P31371 208 aaPredicted RBP3.42□□□□□ -1.86
BRCA2-206ENST00000544455 RPS11P62280 158 aaKnown RBP eCLIP3.42□□□□□ -1.86
BRCA2-206ENST00000544455 CORO6Q6QEF8 472 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 COX15Q7KZN9 410 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 CMTM4Q8IZR5 234 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 OR6V1Q8N148 313 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 RGP1Q92546 391 aaPredicted RBP3.42□□□□□ -1.86
BRCA2-206ENST00000544455 TXNDC15Q96J42 360 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 MCUBQ9NWR8 336 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 A3GALT2U3KPV4 340 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 A0A0A6YYJ9 748 aa3.42□□□□□ -1.86
BRCA2-206ENST00000544455 ZNF264O43296 627 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms