RNA–Protein interactions for RNA: ENST00000541295.5

LMO3-225, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-225ENST00000541295 ST8SIA3O43173 380 aa5.72□□□□□ -1.49
LMO3-225ENST00000541295 MRPS14O60783 128 aaKnown RBP5.72□□□□□ -1.49
LMO3-225ENST00000541295 SH3BGRLO75368 114 aa5.72□□□□□ -1.49
LMO3-225ENST00000541295 S1PR4O95977 384 aa5.72□□□□□ -1.49
LMO3-225ENST00000541295 NR2F6P10588 404 aa5.72□□□□□ -1.49
LMO3-225ENST00000541295 COL9A1P20849 921 aa5.72□□□□□ -1.49
LMO3-225ENST00000541295 EPHA1P21709 976 aa5.72□□□□□ -1.49
LMO3-225ENST00000541295 KDELR1P24390 212 aa5.72□□□□□ -1.49
LMO3-225ENST00000541295 COILP38432 576 aaPredicted RBP5.72□□□□□ -1.49
LMO3-225ENST00000541295 PPT1P50897 306 aa5.72□□□□□ -1.49
LMO3-225ENST00000541295 PRR27Q6MZM9 219 aa5.72□□□□□ -1.49
LMO3-225ENST00000541295 GAREM2Q75VX8 874 aa5.72□□□□□ -1.49
LMO3-225ENST00000541295 FAM129CQ86XR2 697 aa5.72□□□□□ -1.49
LMO3-225ENST00000541295 TTC16Q8NEE8 873 aa5.72□□□□□ -1.49
LMO3-225ENST00000541295 KCNG3Q8TAE7 436 aa5.72□□□□□ -1.49
LMO3-225ENST00000541295 CLEC4CQ8WTT0 213 aa5.72□□□□□ -1.49
LMO3-225ENST00000541295 NDRG1Q92597 394 aaKnown RBP5.72□□□□□ -1.49
LMO3-225ENST00000541295 BCL2L2Q92843 193 aaPredicted RBP5.72□□□□□ -1.49
LMO3-225ENST00000541295 HRASLS5Q96KN8 279 aa5.72□□□□□ -1.49
LMO3-225ENST00000541295 MECRQ9BV79 373 aa5.72□□□□□ -1.49
LMO3-225ENST00000541295 AGPAT4Q9NRZ5 378 aa5.72□□□□□ -1.49
LMO3-225ENST00000541295 SLC17A6Q9P2U8 582 aa5.72□□□□□ -1.49
LMO3-225ENST00000541295 SCN10AQ9Y5Y9 1956 aa5.71□□□□□ -1.49
LMO3-225ENST00000541295 KCNE1BA0A087WTH5 132 aa5.71□□□□□ -1.49
LMO3-225ENST00000541295 A0A087X1B8 175 aa5.71□□□□□ -1.49
LMO3-225ENST00000541295 TMEM218A2RU14 115 aa5.71□□□□□ -1.49
LMO3-225ENST00000541295 K7ESF4 209 aa5.71□□□□□ -1.49
LMO3-225ENST00000541295 NRP2O60462 931 aa5.71□□□□□ -1.49
LMO3-225ENST00000541295 DKK1O94907 266 aa5.71□□□□□ -1.49
LMO3-225ENST00000541295 C1QCP02747 245 aa5.71□□□□□ -1.49
LMO3-225ENST00000541295 CYBBP04839 570 aa5.71□□□□□ -1.49
LMO3-225ENST00000541295 ITGB2P05107 769 aa5.71□□□□□ -1.49
LMO3-225ENST00000541295 KITP10721 976 aa5.71□□□□□ -1.49
LMO3-225ENST00000541295 CSNK1A1P48729 337 aa5.71□□□□□ -1.49
LMO3-225ENST00000541295 RAB9AP51151 201 aa5.71□□□□□ -1.49
LMO3-225ENST00000541295 LILRA4P59901 499 aa5.71□□□□□ -1.49
LMO3-225ENST00000541295 NAAAQ02083 359 aa5.71□□□□□ -1.49
LMO3-225ENST00000541295 EMX1Q04741 257 aaPredicted RBP5.71□□□□□ -1.49
LMO3-225ENST00000541295 BICRALQ6AI39 1079 aa5.71□□□□□ -1.49
LMO3-225ENST00000541295 LINGO4Q6UY18 593 aa5.71□□□□□ -1.49
LMO3-225ENST00000541295 SLC16A9Q7RTY1 509 aa5.71□□□□□ -1.49
LMO3-225ENST00000541295 RTN4RL1Q86UN2 441 aaPredicted RBP5.71□□□□□ -1.49
LMO3-225ENST00000541295 OR5M9Q8NGP3 310 aa5.71□□□□□ -1.49
LMO3-225ENST00000541295 OR5R1Q8NH85 324 aa5.71□□□□□ -1.49
LMO3-225ENST00000541295 GNPDA2Q8TDQ7 276 aa5.71□□□□□ -1.49
LMO3-225ENST00000541295 RXFP2Q8WXD0 754 aa5.71□□□□□ -1.49
LMO3-225ENST00000541295 RPUSD4Q96CM3 377 aaKnown RBP5.71□□□□□ -1.49
LMO3-225ENST00000541295 CCDC126Q96EE4 140 aa5.71□□□□□ -1.49
LMO3-225ENST00000541295 REEP6Q96HR9 211 aa5.71□□□□□ -1.49
LMO3-225ENST00000541295 HHIPL1Q96JK4 782 aa5.71□□□□□ -1.49
LMO3-225ENST00000541295 ZNF583Q96ND8 569 aa5.71□□□□□ -1.49
LMO3-225ENST00000541295 DGAT2Q96PD7 388 aa5.71□□□□□ -1.49
LMO3-225ENST00000541295 NPAS2Q99743 824 aa5.71□□□□□ -1.49
LMO3-225ENST00000541295 WDR54Q9H977 334 aa5.71□□□□□ -1.49
LMO3-225ENST00000541295 USP22Q9UPT9 525 aa5.71□□□□□ -1.49
LMO3-225ENST00000541295 ARL5CA6NH57 179 aa5.71□□□□□ -1.5
LMO3-225ENST00000541295 WIPF1O43516 503 aa5.71□□□□□ -1.5
LMO3-225ENST00000541295 ORC5O43913 435 aa5.71□□□□□ -1.5
LMO3-225ENST00000541295 PRKCGP05129 697 aa5.71□□□□□ -1.5
LMO3-225ENST00000541295 SYPP08247 313 aa5.71□□□□□ -1.5
LMO3-225ENST00000541295 CSF3P09919 207 aa5.71□□□□□ -1.5
LMO3-225ENST00000541295 PNPLA4P41247 253 aa5.71□□□□□ -1.5
LMO3-225ENST00000541295 TTPAP49638 278 aa5.71□□□□□ -1.5
LMO3-225ENST00000541295 PDLIM4P50479 330 aa5.71□□□□□ -1.5
LMO3-225ENST00000541295 RAB28P51157 221 aa5.71□□□□□ -1.5
LMO3-225ENST00000541295 CDKN2DP55273 166 aa5.71□□□□□ -1.5
LMO3-225ENST00000541295 CLDN18P56856 261 aa5.71□□□□□ -1.5
LMO3-225ENST00000541295 CKS1BP61024 79 aa5.71□□□□□ -1.5
LMO3-225ENST00000541295 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.71□□□□□ -1.5
LMO3-225ENST00000541295 SRSF6Q13247 344 aaKnown RBP5.71□□□□□ -1.5
LMO3-225ENST00000541295 ZNF234Q14588 700 aa5.71□□□□□ -1.5
LMO3-225ENST00000541295 ZBTB6Q15916 424 aa5.71□□□□□ -1.5
LMO3-225ENST00000541295 PYCR3Q53H96 274 aa5.71□□□□□ -1.5
LMO3-225ENST00000541295 LCLAT1Q6UWP7 414 aa5.71□□□□□ -1.5
LMO3-225ENST00000541295 RNF111Q6ZNA4 994 aa5.71□□□□□ -1.5
LMO3-225ENST00000541295 ZNF620Q6ZNG0 422 aa5.71□□□□□ -1.5
LMO3-225ENST00000541295 ATP6V1C2Q8NEY4 427 aa5.71□□□□□ -1.5
LMO3-225ENST00000541295 OR4E2Q8NGC2 313 aa5.71□□□□□ -1.5
LMO3-225ENST00000541295 OR5AK3PQ8NH89 298 aa5.71□□□□□ -1.5
LMO3-225ENST00000541295 FBXO25Q8TCJ0 367 aa5.71□□□□□ -1.5
LMO3-225ENST00000541295 ELMOD3Q96FG2 381 aa5.71□□□□□ -1.5
LMO3-225ENST00000541295 SIGLEC10Q96LC7 697 aa5.71□□□□□ -1.5
LMO3-225ENST00000541295 SENP8Q96LD8 212 aa5.71□□□□□ -1.5
LMO3-225ENST00000541295 SLC32A1Q9H598 525 aa5.71□□□□□ -1.5
LMO3-225ENST00000541295 SMCO4Q9NRQ5 59 aa5.71□□□□□ -1.5
LMO3-225ENST00000541295 PNPOQ9NVS9 261 aa5.71□□□□□ -1.5
LMO3-225ENST00000541295 COMMD3Q9UBI1 195 aa5.71□□□□□ -1.5
LMO3-225ENST00000541295 PRPF19Q9UMS4 504 aaKnown RBP5.71□□□□□ -1.5
LMO3-225ENST00000541295 EFCAB9A8MZ26 197 aa5.71□□□□□ -1.5
LMO3-225ENST00000541295 PIRO00625 290 aa5.71□□□□□ -1.5
LMO3-225ENST00000541295 ICOSLGO75144 302 aa5.71□□□□□ -1.5
LMO3-225ENST00000541295 HPP00738 406 aa5.71□□□□□ -1.5
LMO3-225ENST00000541295 HPRP00739 348 aa5.71□□□□□ -1.5
LMO3-225ENST00000541295 MTHFD2P13995 350 aa5.71□□□□□ -1.5
LMO3-225ENST00000541295 GPD1P21695 349 aa5.71□□□□□ -1.5
LMO3-225ENST00000541295 OMGP23515 440 aa5.71□□□□□ -1.5
LMO3-225ENST00000541295 MIPP30301 263 aa5.71□□□□□ -1.5
LMO3-225ENST00000541295 RPL21P46778 160 aaKnown RBP5.71□□□□□ -1.5
LMO3-225ENST00000541295 CDX1P47902 265 aaPredicted RBP5.71□□□□□ -1.5
LMO3-225ENST00000541295 SLC18A1P54219 525 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms