RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 PARM1Q6UWI2 310 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 TMPRSS11FQ6ZWK6 438 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 PARGQ86W56 976 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 APCDD1Q8J025 514 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 UBAC2Q8NBM4 344 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 OR2L5Q8NG80 312 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 OR4K2Q8NGD2 314 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 STOML3Q8TAV4 291 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 FGF14Q92915 247 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 TRPV4Q9HBA0 871 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 RDH14Q9HBH5 336 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 NLE1Q9NVX2 485 aaPredicted RBP8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 PARPBPQ9NWS1 579 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 GAR1Q9NY12 217 aaKnown RBP8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 PIKFYVEQ9Y2I7 2098 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 MYOFQ9NZM1 2061 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 A0A1W2PPH5 198 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 OTOL1A6NHN0 477 aaPredicted RBP8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 PCDH8O95206 1070 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 IFNA2P01563 188 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 PMP2P02689 132 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 FGF1P05230 155 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 C6P13671 934 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 ATF1P18846 271 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 AGTR1P30556 359 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 CD70P32970 193 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 CDK6Q00534 326 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 CDK5Q00535 292 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 LMAN2Q12907 356 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 SMAD4Q13485 552 aaKnown RBP8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 RSU1Q15404 277 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 MPPED2Q15777 294 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 TMEM244Q5VVB8 128 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 OLFML2AQ68BL7 652 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 ASTLQ6HA08 431 aaPredicted RBP8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 FIGNL1Q6PIW4 674 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 ZNF322Q6U7Q0 402 aaPredicted RBP8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 VITQ6UXI7 678 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 MUC20Q8N307 709 aaPredicted RBP8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 GTPBP8Q8N3Z3 284 aaPredicted RBP8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 POGLUT1Q8NBL1 392 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 DNAAF1Q8NEP3 725 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 OR5D16Q8NGK9 328 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 FIBINQ8TAL6 211 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 ALG14Q96F25 216 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 ATG101Q9BSB4 218 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 SMOC1Q9H4F8 434 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 ISG20L2Q9H9L3 353 aaKnown RBP8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 UNKLQ9H9P5 680 aaKnown RBP8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 SEC61A2Q9H9S3 476 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 CRLF2Q9HC73 371 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 KLK11Q9UBX7 282 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 CD207Q9UJ71 328 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 FBXL21Q9UKT6 434 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 OR51B4Q9Y5P0 310 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 NUDT19A8MXV4 375 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 TOX3O15405 576 aaPredicted RBP8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 OR10H2O60403 315 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 PRAMEF11O60813 436 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 RDH16O75452 317 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 SERPIND1P05546 499 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 SNRPCP09234 159 aaKnown RBP8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 CD79AP11912 226 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 PRPH2P23942 346 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 NRG3P56975 720 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 RAC1P63000 192 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 BIKQ13323 160 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 NAE1Q13564 534 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 ELAVL1Q15717 326 aaKnown RBP8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 SLC35D3Q5M8T2 416 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 NKAPLQ5M9Q1 402 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 ATPAF1Q5TC12 328 aaPredicted RBP8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 LIPNQ5VXI9 398 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 ADAM5Q6NVV9 412 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 PAPD4Q6PIY7 484 aaKnown RBP8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 LINGO4Q6UY18 593 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 OR51S1Q8NGJ8 323 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 CSGALNACT1Q8TDX6 532 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 TNFAIP8L1Q8WVP5 186 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 ISOC2Q96AB3 205 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 ECHDC3Q96DC8 303 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 OTUB2Q96DC9 234 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 NECAB3Q96P71 396 aaPredicted RBP8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 TAAR9Q96RI9 348 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 KXD1Q9BQD3 176 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 FAM83CQ9BQN1 747 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 ALG8Q9BVK2 526 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 TEX12Q9BXU0 123 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 RPS10P5Q9NQ39 176 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 MMP26Q9NRE1 261 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 PCDHB1Q9Y5F3 818 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 KDM4EB2RXH2 506 aaPredicted RBP8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 KDELR3O43731 214 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 OR2F2O95006 317 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 ATP1B1P05026 303 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 SBK2P0C263 348 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 PAX1P15863 534 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 XPAP23025 273 aaPredicted RBP8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 CEACAM6P40199 344 aa8.72□□□□□ -1.01
CTNNA1-243ENST00000540387 GLP1RP43220 463 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms