RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 FAR1Q8WVX9 515 aa15.33■□□□□ 0.04
COPS3-212ENST00000539941 RORBQ92753 470 aa15.33■□□□□ 0.04
COPS3-212ENST00000539941 RFKQ969G6 155 aa15.33■□□□□ 0.04
COPS3-212ENST00000539941 TNFRSF13CQ96RJ3 184 aa15.33■□□□□ 0.04
COPS3-212ENST00000539941 IFT27Q9BW83 186 aa15.33■□□□□ 0.04
COPS3-212ENST00000539941 CDCP1Q9H5V8 836 aa15.33■□□□□ 0.04
COPS3-212ENST00000539941 GALNT9Q9HCQ5 603 aa15.33■□□□□ 0.04
COPS3-212ENST00000539941 WARS2Q9UGM6 360 aaKnown RBP15.33■□□□□ 0.04
COPS3-212ENST00000539941 WASF3Q9UPY6 502 aa15.33■□□□□ 0.04
COPS3-212ENST00000539941 CHCHD2Q9Y6H1 151 aaPredicted RBP15.33■□□□□ 0.04
COPS3-212ENST00000539941 C17orf51A8MQB3 221 aa15.32■□□□□ 0.04
COPS3-212ENST00000539941 ZNF99A8MXY4 864 aaPredicted RBP15.32■□□□□ 0.04
COPS3-212ENST00000539941 ETV2O00321 342 aaPredicted RBP15.32■□□□□ 0.04
COPS3-212ENST00000539941 DBTP11182 482 aaKnown RBP15.32■□□□□ 0.04
COPS3-212ENST00000539941 CASP3P42574 277 aa15.32■□□□□ 0.04
COPS3-212ENST00000539941 RPS4XP62701 263 aaKnown RBP15.32■□□□□ 0.04
COPS3-212ENST00000539941 ZNF91Q05481 1191 aa15.32■□□□□ 0.04
COPS3-212ENST00000539941 IGF2-ASQ6U949 168 aa15.32■□□□□ 0.04
COPS3-212ENST00000539941 THSD4Q6ZMP0 1018 aa15.32■□□□□ 0.04
COPS3-212ENST00000539941 ADCK1Q86TW2 530 aa15.32■□□□□ 0.04
COPS3-212ENST00000539941 FRMD6Q96NE9 622 aa15.32■□□□□ 0.04
COPS3-212ENST00000539941 DHRS9Q9BPW9 319 aa15.32■□□□□ 0.04
COPS3-212ENST00000539941 FUNDC2Q9BWH2 189 aa15.32■□□□□ 0.04
COPS3-212ENST00000539941 CDCA4Q9BXL8 241 aa15.32■□□□□ 0.04
COPS3-212ENST00000539941 ACOT13Q9NPJ3 140 aa15.32■□□□□ 0.04
COPS3-212ENST00000539941 CMC2Q9NRP2 79 aa15.32■□□□□ 0.04
COPS3-212ENST00000539941 STMN3Q9NZ72 180 aa15.32■□□□□ 0.04
COPS3-212ENST00000539941 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.32■□□□□ 0.04
COPS3-212ENST00000539941 CHD8Q9HCK8 2581 aa15.32■□□□□ 0.04
COPS3-212ENST00000539941 TRAV36DV7A0A075B6V5 113 aa15.32■□□□□ 0.04
COPS3-212ENST00000539941 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.32■□□□□ 0.04
COPS3-212ENST00000539941 TMED7-TICAM2A0A0A6YYA0 188 aa15.32■□□□□ 0.04
COPS3-212ENST00000539941 LOC101059948A0A1B0GTJ6 334 aa15.32■□□□□ 0.04
COPS3-212ENST00000539941 SLC25A12O75746 678 aa15.32■□□□□ 0.04
COPS3-212ENST00000539941 UPK1BO75841 260 aa15.32■□□□□ 0.04
COPS3-212ENST00000539941 FADS2O95864 444 aaKnown RBP15.32■□□□□ 0.04
COPS3-212ENST00000539941 F8A1P23610 371 aa15.32■□□□□ 0.04
COPS3-212ENST00000539941 RBMS1P29558 406 aaKnown RBP15.32■□□□□ 0.04
COPS3-212ENST00000539941 MASP1P48740 699 aa15.32■□□□□ 0.04
COPS3-212ENST00000539941 MAP2K6P52564 334 aa15.32■□□□□ 0.04
COPS3-212ENST00000539941 IRF3Q14653 427 aa15.32■□□□□ 0.04
COPS3-212ENST00000539941 SYT6Q5T7P8 510 aaPredicted RBP15.32■□□□□ 0.04
COPS3-212ENST00000539941 ZNF544Q6NX49 715 aa15.32■□□□□ 0.04
COPS3-212ENST00000539941 JMJD6Q6NYC1 403 aaPredicted RBP15.32■□□□□ 0.04
COPS3-212ENST00000539941 ARHGAP11AQ6P4F7 1023 aa15.32■□□□□ 0.04
COPS3-212ENST00000539941 STK35Q8TDR2 534 aa15.32■□□□□ 0.04
COPS3-212ENST00000539941 DACH2Q96NX9 599 aa15.32■□□□□ 0.04
COPS3-212ENST00000539941 FKRPQ9H9S5 495 aa15.32■□□□□ 0.04
COPS3-212ENST00000539941 NANSQ9NR45 359 aa15.32■□□□□ 0.04
COPS3-212ENST00000539941 MRPS18AQ9NVS2 196 aaKnown RBP15.32■□□□□ 0.04
COPS3-212ENST00000539941 WDR70Q9NW82 654 aa15.32■□□□□ 0.04
COPS3-212ENST00000539941 IL20RAQ9UHF4 553 aa15.32■□□□□ 0.04
COPS3-212ENST00000539941 ZNF221Q9UK13 617 aa15.32■□□□□ 0.04
COPS3-212ENST00000539941 TMED7Q9Y3B3 224 aa15.32■□□□□ 0.04
COPS3-212ENST00000539941 A8MVM7 634 aa15.31■□□□□ 0.04
COPS3-212ENST00000539941 CDRT15L2A8MXV6 281 aa15.31■□□□□ 0.04
COPS3-212ENST00000539941 GMFGO60234 142 aa15.31■□□□□ 0.04
COPS3-212ENST00000539941 SUSD5O60279 629 aa15.31■□□□□ 0.04
COPS3-212ENST00000539941 MTRF1O75570 445 aaKnown RBP15.31■□□□□ 0.04
COPS3-212ENST00000539941 MT-ATP6P00846 226 aa15.31■□□□□ 0.04
COPS3-212ENST00000539941 STSP08842 583 aa15.31■□□□□ 0.04
COPS3-212ENST00000539941 PEPDP12955 493 aa15.31■□□□□ 0.04
COPS3-212ENST00000539941 PRKCAP17252 672 aa15.31■□□□□ 0.04
COPS3-212ENST00000539941 C21orf33P30042 268 aaPredicted RBP15.31■□□□□ 0.04
COPS3-212ENST00000539941 APOBEC1P41238 236 aaKnown RBP15.31■□□□□ 0.04
COPS3-212ENST00000539941 Q0VFX4 171 aa15.31■□□□□ 0.04
COPS3-212ENST00000539941 IL10RAQ13651 578 aa15.31■□□□□ 0.04
COPS3-212ENST00000539941 KLHL22Q53GT1 634 aa15.31■□□□□ 0.04
COPS3-212ENST00000539941 SLC25A53Q5H9E4 307 aa15.31■□□□□ 0.04
COPS3-212ENST00000539941 AADACL4Q5VUY2 407 aa15.31■□□□□ 0.04
COPS3-212ENST00000539941 UBE2UQ5VVX9 321 aa15.31■□□□□ 0.04
COPS3-212ENST00000539941 RNLSQ5VYX0 342 aa15.31■□□□□ 0.04
COPS3-212ENST00000539941 NXNL2Q5VZ03 156 aa15.31■□□□□ 0.04
COPS3-212ENST00000539941 BICRALQ6AI39 1079 aa15.31■□□□□ 0.04
COPS3-212ENST00000539941 DPY19L2P2Q6ZN68 376 aa15.31■□□□□ 0.04
COPS3-212ENST00000539941 GID4Q8IVV7 300 aa15.31■□□□□ 0.04
COPS3-212ENST00000539941 TMEM156Q8N614 296 aa15.31■□□□□ 0.04
COPS3-212ENST00000539941 ADAMTS17Q8TE56 1095 aa15.31■□□□□ 0.04
COPS3-212ENST00000539941 CRELD1Q96HD1 420 aa15.31■□□□□ 0.04
COPS3-212ENST00000539941 SGCZQ96LD1 299 aa15.31■□□□□ 0.04
COPS3-212ENST00000539941 GPX7Q96SL4 187 aaPredicted RBP15.31■□□□□ 0.04
COPS3-212ENST00000539941 ENKD1Q9H0I2 346 aa15.31■□□□□ 0.04
COPS3-212ENST00000539941 SH2D2AQ9NP31 389 aa15.31■□□□□ 0.04
COPS3-212ENST00000539941 HIF3AQ9Y2N7 669 aa15.31■□□□□ 0.04
COPS3-212ENST00000539941 TMA7Q9Y2S6 64 aaKnown RBP15.31■□□□□ 0.04
COPS3-212ENST00000539941 GPR52Q9Y2T5 361 aa15.31■□□□□ 0.04
COPS3-212ENST00000539941 A3GALT2U3KPV4 340 aa15.31■□□□□ 0.04
COPS3-212ENST00000539941 RIIAD1A6NNX1 92 aa15.3■□□□□ 0.04
COPS3-212ENST00000539941 IFNGP01579 166 aa15.3■□□□□ 0.04
COPS3-212ENST00000539941 ASAH2BP0C7U1 165 aa15.3■□□□□ 0.04
COPS3-212ENST00000539941 HK1P19367 917 aa15.3■□□□□ 0.04
COPS3-212ENST00000539941 MAP2K4P45985 399 aa15.3■□□□□ 0.04
COPS3-212ENST00000539941 ZNF41P51814 821 aaPredicted RBP15.3■□□□□ 0.04
COPS3-212ENST00000539941 RSBN1Q5VWQ0 802 aaPredicted RBP15.3■□□□□ 0.04
COPS3-212ENST00000539941 IL20RBQ6UXL0 311 aa15.3■□□□□ 0.04
COPS3-212ENST00000539941 CCDC81Q6ZN84 652 aa15.3■□□□□ 0.04
COPS3-212ENST00000539941 SLC16A12Q6ZSM3 486 aa15.3■□□□□ 0.04
COPS3-212ENST00000539941 ADGRG3Q86Y34 549 aa15.3■□□□□ 0.04
COPS3-212ENST00000539941 GPALPP1Q8IXQ4 340 aa15.3■□□□□ 0.04
COPS3-212ENST00000539941 C10orf53Q8N6V4 93 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms