RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 RANBP3LQ86VV4 465 aaPredicted RBP11.54□□□□□ -0.56
SFSWAP-208ENST00000539506 SLC44A3Q8N4M1 653 aa11.54□□□□□ -0.56
SFSWAP-208ENST00000539506 COX18Q8N8Q8 333 aa11.54□□□□□ -0.56
SFSWAP-208ENST00000539506 SDR9C7Q8NEX9 313 aa11.54□□□□□ -0.56
SFSWAP-208ENST00000539506 OR4K13Q8NH42 304 aa11.54□□□□□ -0.56
SFSWAP-208ENST00000539506 SMPDL3BQ92485 455 aa11.54□□□□□ -0.56
SFSWAP-208ENST00000539506 CNOT9Q92600 299 aaKnown RBP11.54□□□□□ -0.56
SFSWAP-208ENST00000539506 ANKRD9Q96BM1 317 aaPredicted RBP11.54□□□□□ -0.56
SFSWAP-208ENST00000539506 KLHL15Q96M94 604 aa11.54□□□□□ -0.56
SFSWAP-208ENST00000539506 PTCHD1Q96NR3 888 aa11.54□□□□□ -0.56
SFSWAP-208ENST00000539506 OR2M2Q96R28 347 aa11.54□□□□□ -0.56
SFSWAP-208ENST00000539506 CD180Q99467 661 aa11.54□□□□□ -0.56
SFSWAP-208ENST00000539506 ZFYVE21Q9BQ24 234 aa11.54□□□□□ -0.56
SFSWAP-208ENST00000539506 TEX12Q9BXU0 123 aa11.54□□□□□ -0.56
SFSWAP-208ENST00000539506 FXYD6Q9H0Q3 95 aa11.54□□□□□ -0.56
SFSWAP-208ENST00000539506 DIABLOQ9NR28 239 aa11.54□□□□□ -0.56
SFSWAP-208ENST00000539506 DZANK1Q9NVP4 752 aa11.54□□□□□ -0.56
SFSWAP-208ENST00000539506 CFAP54Q96N23 3096 aa11.54□□□□□ -0.56
SFSWAP-208ENST00000539506 MEIKINA0A087WXM9 373 aa11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 TEX51A0A1B0GUA7 166 aa11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 HRKO00198 91 aa11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 RPP14O95059 124 aaKnown RBP11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 APOC3P02656 99 aa11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 TLX1P31314 330 aaPredicted RBP11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 SOX2P48431 317 aa11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 C2orf68Q2NKX9 166 aa11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 OR11G2Q8NGC1 345 aa11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 BPIFA2Q96DR5 249 aa11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 GINS4Q9BRT9 223 aa11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 PRDM9Q9NQV7 894 aa11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 PRKNO60260 465 aaPredicted RBP11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 PTP4A3O75365 173 aa11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 IGKV1D-16P01601 117 aa11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 DBIP07108 87 aaKnown RBP11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 SULT1A3P0DMM9 295 aa11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 SULT1A4P0DMN0 295 aa11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 TMIGD3P0DMS9 266 aaPredicted RBP11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 GAAP10253 952 aa11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 MAZP56270 477 aaKnown RBP11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 SLC22A18ASQ8N1D0 253 aa11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 MEIOBQ8N635 442 aa11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 ADAMTS14Q8WXS8 1223 aa11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 CTHRC1Q96CG8 243 aa11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 KCTD12Q96CX2 325 aaKnown RBP11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 FAM60AQ9NP50 221 aa11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 DUSP22Q9NRW4 184 aa11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 GNG8Q9UK08 70 aa11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 BRINP1O60477 761 aa11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 SPDEFO95238 335 aa11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 GPR75O95800 540 aa11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 CBX7O95931 251 aa11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 MT-ND5P03915 603 aa11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 CTHP32929 405 aa11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 EMDP50402 254 aa11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 PSMA6P60900 246 aaKnown RBP11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 ZNF85Q03923 595 aa11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 PLA2G7Q13093 441 aa11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 HTR4Q13639 388 aa11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 EIPR1Q53HC9 387 aa11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 CLLU1Q5K131 121 aa11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 YOD1Q5VVQ6 348 aaPredicted RBP11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 C3P1Q6ZMU1 363 aa11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 ABHD13Q7L211 337 aa11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 CA13Q8N1Q1 262 aa11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 TOR1AIP2Q8NFQ8 470 aa11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 BAHD1Q8TBE0 780 aaPredicted RBP11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 ZNRF4Q8WWF5 429 aa11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 ACOT12Q8WYK0 555 aa11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 ERMAPQ96PL5 475 aaPredicted RBP11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 MICU1Q9BPX6 476 aa11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 LYRM4Q9HD34 91 aa11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 CLEC1BQ9P126 229 aa11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 KCNMB2Q9Y691 235 aa11.53□□□□□ -0.56
SFSWAP-208ENST00000539506 A0A1B0GTH9 108 aa11.52□□□□□ -0.56
SFSWAP-208ENST00000539506 OR2W5A6NFC9 320 aa11.52□□□□□ -0.56
SFSWAP-208ENST00000539506 APBB3O95704 486 aa11.52□□□□□ -0.56
SFSWAP-208ENST00000539506 RLN1P04808 185 aa11.52□□□□□ -0.56
SFSWAP-208ENST00000539506 SLC2A5P22732 501 aa11.52□□□□□ -0.56
SFSWAP-208ENST00000539506 NUP62P37198 522 aaPredicted RBP11.52□□□□□ -0.56
SFSWAP-208ENST00000539506 RPS27P42677 84 aaKnown RBP11.52□□□□□ -0.56
SFSWAP-208ENST00000539506 FAM53BQ14153 422 aa11.52□□□□□ -0.56
SFSWAP-208ENST00000539506 FAM74A1Q5RGS3 127 aa11.52□□□□□ -0.56
SFSWAP-208ENST00000539506 TMPRSS11FQ6ZWK6 438 aa11.52□□□□□ -0.56
SFSWAP-208ENST00000539506 SAMD14Q8IZD0 417 aaPredicted RBP11.52□□□□□ -0.56
SFSWAP-208ENST00000539506 CDRT4Q8N9R6 151 aa11.52□□□□□ -0.56
SFSWAP-208ENST00000539506 CAMKVQ8NCB2 501 aa11.52□□□□□ -0.56
SFSWAP-208ENST00000539506 OR5M1Q8NGP8 315 aa11.52□□□□□ -0.56
SFSWAP-208ENST00000539506 TOE1Q96GM8 510 aaKnown RBP11.52□□□□□ -0.56
SFSWAP-208ENST00000539506 TNFRSF13CQ96RJ3 184 aa11.52□□□□□ -0.56
SFSWAP-208ENST00000539506 SLC7A5P2Q9GIP4 190 aa11.52□□□□□ -0.56
SFSWAP-208ENST00000539506 MTIF3Q9H2K0 278 aaKnown RBP11.52□□□□□ -0.56
SFSWAP-208ENST00000539506 NKX2-4Q9H2Z4 354 aa11.52□□□□□ -0.56
SFSWAP-208ENST00000539506 CMC2Q9NRP2 79 aa11.52□□□□□ -0.56
SFSWAP-208ENST00000539506 DTX4Q9Y2E6 619 aa11.52□□□□□ -0.56
SFSWAP-208ENST00000539506 A0A087WV62 115 aa11.52□□□□□ -0.57
SFSWAP-208ENST00000539506 TGFBR3LH3BV60 316 aa11.52□□□□□ -0.57
SFSWAP-208ENST00000539506 GALR3O60755 368 aaPredicted RBP11.52□□□□□ -0.57
SFSWAP-208ENST00000539506 PPM1BO75688 479 aa11.52□□□□□ -0.57
SFSWAP-208ENST00000539506 EPXP11678 715 aa11.52□□□□□ -0.57
SFSWAP-208ENST00000539506 F8A1P23610 371 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms