RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 GRPRP30550 384 aa12.72□□□□□ -0.37
CD4-208ENST00000538827 RPL4P36578 427 aaKnown RBP12.72□□□□□ -0.37
CD4-208ENST00000538827 STARP49675 285 aa12.72□□□□□ -0.37
CD4-208ENST00000538827 MAP2K6P52564 334 aa12.72□□□□□ -0.37
CD4-208ENST00000538827 RAC1P63000 192 aa12.72□□□□□ -0.37
CD4-208ENST00000538827 LTBQ06643 244 aa12.72□□□□□ -0.37
CD4-208ENST00000538827 SLC10A1Q14973 349 aa12.72□□□□□ -0.37
CD4-208ENST00000538827 ZBED5Q49AG3 693 aa12.72□□□□□ -0.37
CD4-208ENST00000538827 NHSL2Q5HYW2 709 aa12.72□□□□□ -0.37
CD4-208ENST00000538827 RNFT1Q5M7Z0 435 aa12.72□□□□□ -0.37
CD4-208ENST00000538827 TMEM236Q5W0B7 351 aa12.72□□□□□ -0.37
CD4-208ENST00000538827 TTC23Q5W5X9 447 aa12.72□□□□□ -0.37
CD4-208ENST00000538827 RPL13AP3Q6NVV1 102 aa12.72□□□□□ -0.37
CD4-208ENST00000538827 SMARCD3Q6STE5 483 aa12.72□□□□□ -0.37
CD4-208ENST00000538827 CD300LDQ6UXZ3 194 aa12.72□□□□□ -0.37
CD4-208ENST00000538827 TRILQ7L0X0 811 aa12.72□□□□□ -0.37
CD4-208ENST00000538827 IGFN1Q86VF2 1251 aa12.72□□□□□ -0.37
CD4-208ENST00000538827 CLDN22Q8N7P3 220 aa12.72□□□□□ -0.37
CD4-208ENST00000538827 EXD3Q8N9H8 876 aa12.72□□□□□ -0.37
CD4-208ENST00000538827 FAM81AQ8TBF8 368 aa12.72□□□□□ -0.37
CD4-208ENST00000538827 TSSK6Q9BXA6 273 aa12.72□□□□□ -0.37
CD4-208ENST00000538827 POTEKPQ9BYX7 375 aa12.72□□□□□ -0.37
CD4-208ENST00000538827 MCCC2Q9HCC0 563 aa12.72□□□□□ -0.37
CD4-208ENST00000538827 ALKBH4Q9NXW9 302 aa12.72□□□□□ -0.37
CD4-208ENST00000538827 SEC14L4Q9UDX3 406 aa12.72□□□□□ -0.37
CD4-208ENST00000538827 ZNF229Q9UJW7 825 aa12.72□□□□□ -0.37
CD4-208ENST00000538827 TLN1Q9Y490 2541 aaKnown RBP12.71□□□□□ -0.37
CD4-208ENST00000538827 TRGV5A0A0B4J1U4 118 aa12.71□□□□□ -0.37
CD4-208ENST00000538827 LOC100130705A0A1B0GUX0 176 aa12.71□□□□□ -0.37
CD4-208ENST00000538827 LIPT2A6NK58 231 aa12.71□□□□□ -0.37
CD4-208ENST00000538827 C11orf98E9PRG8 122 aa12.71□□□□□ -0.37
CD4-208ENST00000538827 H0YAE9 185 aa12.71□□□□□ -0.37
CD4-208ENST00000538827 BLOC1S5-TXNDC5H3BN57 136 aa12.71□□□□□ -0.37
CD4-208ENST00000538827 M0R082 166 aa12.71□□□□□ -0.37
CD4-208ENST00000538827 SERPINI2O75830 405 aa12.71□□□□□ -0.37
CD4-208ENST00000538827 NDUFB2O95178 105 aa12.71□□□□□ -0.37
CD4-208ENST00000538827 RCBTB2O95199 551 aa12.71□□□□□ -0.37
CD4-208ENST00000538827 OR6A2O95222 327 aa12.71□□□□□ -0.37
CD4-208ENST00000538827 PPP1R3DO95685 299 aa12.71□□□□□ -0.37
CD4-208ENST00000538827 BMP7P18075 431 aa12.71□□□□□ -0.37
CD4-208ENST00000538827 SLC6A6P31641 620 aa12.71□□□□□ -0.37
CD4-208ENST00000538827 MLLT10P55197 1068 aa12.71□□□□□ -0.37
CD4-208ENST00000538827 ADARB1P78563 741 aaKnown RBP12.71□□□□□ -0.37
CD4-208ENST00000538827 IL5RAQ01344 420 aa12.71□□□□□ -0.37
CD4-208ENST00000538827 PMS2P3Q13401 168 aa12.71□□□□□ -0.37
CD4-208ENST00000538827 GINS1Q14691 196 aa12.71□□□□□ -0.37
CD4-208ENST00000538827 PTGES3Q15185 160 aaKnown RBP12.71□□□□□ -0.37
CD4-208ENST00000538827 OR6S1Q8NH40 331 aa12.71□□□□□ -0.37
CD4-208ENST00000538827 MOSPD2Q8NHP6 518 aa12.71□□□□□ -0.37
CD4-208ENST00000538827 MFSD8Q8NHS3 518 aa12.71□□□□□ -0.37
CD4-208ENST00000538827 ZNF417Q8TAU3 575 aa12.71□□□□□ -0.37
CD4-208ENST00000538827 TFAP2CQ92754 450 aa12.71□□□□□ -0.37
CD4-208ENST00000538827 OSTF1Q92882 214 aa12.71□□□□□ -0.37
CD4-208ENST00000538827 TNFRSF13CQ96RJ3 184 aa12.71□□□□□ -0.37
CD4-208ENST00000538827 ZNF587Q96SQ5 575 aaPredicted RBP12.71□□□□□ -0.37
CD4-208ENST00000538827 PITX2Q99697 317 aa12.71□□□□□ -0.37
CD4-208ENST00000538827 IFT27Q9BW83 186 aa12.71□□□□□ -0.37
CD4-208ENST00000538827 GRIP2Q9C0E4 1043 aa12.71□□□□□ -0.37
CD4-208ENST00000538827 SIGLEC7Q9Y286 467 aa12.71□□□□□ -0.37
CD4-208ENST00000538827 HDGFL3Q9Y3E1 203 aa12.71□□□□□ -0.37
CD4-208ENST00000538827 ZAR1LA6NP61 321 aa12.7□□□□□ -0.38
CD4-208ENST00000538827 FTCDNL1E5RQL4 147 aa12.7□□□□□ -0.38
CD4-208ENST00000538827 NPIPA5E9PKD4 350 aa12.7□□□□□ -0.38
CD4-208ENST00000538827 LINC01387J3KSC0 135 aa12.7□□□□□ -0.38
CD4-208ENST00000538827 SULT2B1O00204 365 aa12.7□□□□□ -0.38
CD4-208ENST00000538827 GNAO1P09471 354 aa12.7□□□□□ -0.38
CD4-208ENST00000538827 ASAH2BP0C7U1 165 aa12.7□□□□□ -0.38
CD4-208ENST00000538827 ACADSP16219 412 aa12.7□□□□□ -0.38
CD4-208ENST00000538827 FKBP2P26885 142 aaKnown RBP12.7□□□□□ -0.38
CD4-208ENST00000538827 GGT2P36268 569 aa12.7□□□□□ -0.38
CD4-208ENST00000538827 AQP2P41181 271 aa12.7□□□□□ -0.38
CD4-208ENST00000538827 CLK1P49759 484 aaKnown RBP12.7□□□□□ -0.38
CD4-208ENST00000538827 SMSP52788 366 aa12.7□□□□□ -0.38
CD4-208ENST00000538827 GFRA1P56159 465 aa12.7□□□□□ -0.38
CD4-208ENST00000538827 CLDN20P56880 219 aa12.7□□□□□ -0.38
CD4-208ENST00000538827 SRYQ05066 204 aa12.7□□□□□ -0.38
CD4-208ENST00000538827 TOP3AQ13472 1001 aaPredicted RBP12.7□□□□□ -0.38
CD4-208ENST00000538827 KEAP1Q14145 624 aa12.7□□□□□ -0.38
CD4-208ENST00000538827 MFSD13AQ14CX5 517 aa12.7□□□□□ -0.38
CD4-208ENST00000538827 INAQ16352 499 aa12.7□□□□□ -0.38
CD4-208ENST00000538827 PGGHGQ32M88 737 aa12.7□□□□□ -0.38
CD4-208ENST00000538827 PLEKHN1Q494U1 663 aaPredicted RBP12.7□□□□□ -0.38
CD4-208ENST00000538827 PDSS1Q5T2R2 415 aa12.7□□□□□ -0.38
CD4-208ENST00000538827 HBMQ6B0K9 141 aa12.7□□□□□ -0.38
CD4-208ENST00000538827 KRT80Q6KB66 452 aa12.7□□□□□ -0.38
CD4-208ENST00000538827 FAM180AQ6UWF9 173 aa12.7□□□□□ -0.38
CD4-208ENST00000538827 THSD4Q6ZMP0 1018 aa12.7□□□□□ -0.38
CD4-208ENST00000538827 CHERPQ8IWX8 916 aaKnown RBP12.7□□□□□ -0.38
CD4-208ENST00000538827 C8orf59Q8N0T1 100 aaPredicted RBP12.7□□□□□ -0.38
CD4-208ENST00000538827 SETD9Q8NE22 299 aa12.7□□□□□ -0.38
CD4-208ENST00000538827 OR4Q3Q8NH05 313 aa12.7□□□□□ -0.38
CD4-208ENST00000538827 OR5J2Q8NH18 312 aa12.7□□□□□ -0.38
CD4-208ENST00000538827 ABTB1Q969K4 478 aaPredicted RBP12.7□□□□□ -0.38
CD4-208ENST00000538827 TAAR6Q96RI8 345 aa12.7□□□□□ -0.38
CD4-208ENST00000538827 APOL4Q9BPW4 351 aa12.7□□□□□ -0.38
CD4-208ENST00000538827 ZDHHC11Q9H8X9 412 aa12.7□□□□□ -0.38
CD4-208ENST00000538827 SLC25A19Q9HC21 320 aa12.7□□□□□ -0.38
CD4-208ENST00000538827 CHST11Q9NPF2 352 aa12.7□□□□□ -0.38
CD4-208ENST00000538827 IMPAD1Q9NX62 359 aa12.7□□□□□ -0.38
CD4-208ENST00000538827 TUBD1Q9UJT1 453 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms