RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 ASAH2BP0C7U1 165 aa12.8□□□□□ -0.36
ACTN1-205ENST00000538545 GP1BBP13224 206 aa12.8□□□□□ -0.36
ACTN1-205ENST00000538545 CD59P13987 128 aa12.8□□□□□ -0.36
ACTN1-205ENST00000538545 MC2RQ01718 297 aa12.8□□□□□ -0.36
ACTN1-205ENST00000538545 ZNF85Q03923 595 aa12.8□□□□□ -0.36
ACTN1-205ENST00000538545 TP53I3Q53FA7 332 aa12.8□□□□□ -0.36
ACTN1-205ENST00000538545 ARHGAP11AQ6P4F7 1023 aa12.8□□□□□ -0.36
ACTN1-205ENST00000538545 IL20RBQ6UXL0 311 aa12.8□□□□□ -0.36
ACTN1-205ENST00000538545 GID4Q8IVV7 300 aa12.8□□□□□ -0.36
ACTN1-205ENST00000538545 KLHL36Q8N4N3 616 aa12.8□□□□□ -0.36
ACTN1-205ENST00000538545 C4orf36Q96KX1 117 aa12.8□□□□□ -0.36
ACTN1-205ENST00000538545 POLE4Q9NR33 117 aa12.8□□□□□ -0.36
ACTN1-205ENST00000538545 ING1Q9UK53 422 aaPredicted RBP12.8□□□□□ -0.36
ACTN1-205ENST00000538545 ZMIZ1Q9ULJ6 1067 aa12.8□□□□□ -0.36
ACTN1-205ENST00000538545 STUB1Q9UNE7 303 aa12.8□□□□□ -0.36
ACTN1-205ENST00000538545 TMED7Q9Y3B3 224 aa12.8□□□□□ -0.36
ACTN1-205ENST00000538545 LOXL2Q9Y4K0 774 aa12.8□□□□□ -0.36
ACTN1-205ENST00000538545 STK17BO94768 372 aa12.8□□□□□ -0.36
ACTN1-205ENST00000538545 F10P00742 488 aa12.8□□□□□ -0.36
ACTN1-205ENST00000538545 HLA-DOBP13765 273 aa12.8□□□□□ -0.36
ACTN1-205ENST00000538545 PGCP20142 388 aa12.8□□□□□ -0.36
ACTN1-205ENST00000538545 ACP1P24666 158 aa12.8□□□□□ -0.36
ACTN1-205ENST00000538545 SDC2P34741 201 aa12.8□□□□□ -0.36
ACTN1-205ENST00000538545 ACVR1BP36896 505 aa12.8□□□□□ -0.36
ACTN1-205ENST00000538545 SPEM2Q0P670 501 aa12.8□□□□□ -0.36
ACTN1-205ENST00000538545 CBFBQ13951 182 aa12.8□□□□□ -0.36
ACTN1-205ENST00000538545 SLC6A19Q695T7 634 aa12.8□□□□□ -0.36
ACTN1-205ENST00000538545 NANOGNBQ7Z5D8 188 aa12.8□□□□□ -0.36
ACTN1-205ENST00000538545 MFSD4AQ8N468 514 aa12.8□□□□□ -0.36
ACTN1-205ENST00000538545 C17orf47Q8NEP4 570 aa12.8□□□□□ -0.36
ACTN1-205ENST00000538545 OR13C5Q8NGS8 318 aa12.8□□□□□ -0.36
ACTN1-205ENST00000538545 RASL10BQ96S79 203 aa12.8□□□□□ -0.36
ACTN1-205ENST00000538545 CMKLR1Q99788 373 aa12.8□□□□□ -0.36
ACTN1-205ENST00000538545 BCL7BQ9BQE9 202 aa12.8□□□□□ -0.36
ACTN1-205ENST00000538545 PTDSS2Q9BVG9 487 aa12.8□□□□□ -0.36
ACTN1-205ENST00000538545 FBXL2Q9UKC9 423 aa12.8□□□□□ -0.36
ACTN1-205ENST00000538545 COPS3Q9UNS2 423 aa12.8□□□□□ -0.36
ACTN1-205ENST00000538545 SLC6A5Q9Y345 797 aa12.8□□□□□ -0.36
ACTN1-205ENST00000538545 DCHS1Q96JQ0 3298 aa12.8□□□□□ -0.36
ACTN1-205ENST00000538545 PHF3Q92576 2039 aaKnown RBP12.8□□□□□ -0.36
ACTN1-205ENST00000538545 SPENQ96T58 3664 aaKnown RBP12.8□□□□□ -0.36
ACTN1-205ENST00000538545 TVP23AA6NH52 213 aa12.8□□□□□ -0.36
ACTN1-205ENST00000538545 CLDN25C9JDP6 229 aa12.8□□□□□ -0.36
ACTN1-205ENST00000538545 ITGA10O75578 1167 aa12.8□□□□□ -0.36
ACTN1-205ENST00000538545 SLC25A12O75746 678 aa12.8□□□□□ -0.36
ACTN1-205ENST00000538545 PSMD7P51665 324 aa12.8□□□□□ -0.36
ACTN1-205ENST00000538545 WDFY1Q8IWB7 410 aa12.8□□□□□ -0.36
ACTN1-205ENST00000538545 LRRC75AQ8NAA5 344 aa12.8□□□□□ -0.36
ACTN1-205ENST00000538545 OR5J2Q8NH18 312 aa12.8□□□□□ -0.36
ACTN1-205ENST00000538545 UFD1Q92890 307 aa12.8□□□□□ -0.36
ACTN1-205ENST00000538545 HGDQ93099 445 aa12.8□□□□□ -0.36
ACTN1-205ENST00000538545 TSPAN32Q96QS1 320 aa12.8□□□□□ -0.36
ACTN1-205ENST00000538545 A0A1W2PPK0 400 aa12.79□□□□□ -0.36
ACTN1-205ENST00000538545 A0A1W2PQD3 144 aa12.79□□□□□ -0.36
ACTN1-205ENST00000538545 TMED1Q13445 227 aa12.79□□□□□ -0.36
ACTN1-205ENST00000538545 ZSWIM7Q19AV6 140 aa12.79□□□□□ -0.36
ACTN1-205ENST00000538545 ARL9Q6T311 187 aa12.79□□□□□ -0.36
ACTN1-205ENST00000538545 DHRS13Q6UX07 377 aa12.79□□□□□ -0.36
ACTN1-205ENST00000538545 LYPD8Q6UX82 237 aa12.79□□□□□ -0.36
ACTN1-205ENST00000538545 DPY19L2P2Q6ZN68 376 aa12.79□□□□□ -0.36
ACTN1-205ENST00000538545 FAM122BQ7Z309 247 aa12.79□□□□□ -0.36
ACTN1-205ENST00000538545 KBTBD8Q8NFY9 601 aa12.79□□□□□ -0.36
ACTN1-205ENST00000538545 SLC26A1Q9H2B4 701 aa12.79□□□□□ -0.36
ACTN1-205ENST00000538545 PPIL3Q9H2H8 161 aaKnown RBP12.79□□□□□ -0.36
ACTN1-205ENST00000538545 ZNF160Q9HCG1 818 aa12.79□□□□□ -0.36
ACTN1-205ENST00000538545 TAS2R5Q9NYW4 299 aa12.79□□□□□ -0.36
ACTN1-205ENST00000538545 SSR3Q9UNL2 185 aa12.79□□□□□ -0.36
ACTN1-205ENST00000538545 HIF3AQ9Y2N7 669 aa12.79□□□□□ -0.36
ACTN1-205ENST00000538545 SLC22A31A6NKX4 558 aa12.79□□□□□ -0.36
ACTN1-205ENST00000538545 PRR32B1ATL7 298 aa12.79□□□□□ -0.36
ACTN1-205ENST00000538545 H3BSH0 61 aa12.79□□□□□ -0.36
ACTN1-205ENST00000538545 ZFAND5O76080 213 aa12.79□□□□□ -0.36
ACTN1-205ENST00000538545 SPI1P17947 270 aa12.79□□□□□ -0.36
ACTN1-205ENST00000538545 OTX2P32243 289 aa12.79□□□□□ -0.36
ACTN1-205ENST00000538545 UGT2B10P36537 528 aa12.79□□□□□ -0.36
ACTN1-205ENST00000538545 SLC3A1Q07837 685 aa12.79□□□□□ -0.36
ACTN1-205ENST00000538545 FOXF1Q12946 379 aa12.79□□□□□ -0.36
ACTN1-205ENST00000538545 MELKQ14680 651 aa12.79□□□□□ -0.36
ACTN1-205ENST00000538545 GLYR1Q49A26 553 aaPredicted RBP12.79□□□□□ -0.36
ACTN1-205ENST00000538545 MESTQ5EB52 335 aa12.79□□□□□ -0.36
ACTN1-205ENST00000538545 RNLSQ5VYX0 342 aa12.79□□□□□ -0.36
ACTN1-205ENST00000538545 RAB11FIP2Q7L804 512 aa12.79□□□□□ -0.36
ACTN1-205ENST00000538545 NUBPLQ8TB37 319 aa12.79□□□□□ -0.36
ACTN1-205ENST00000538545 BORCS5Q969J3 196 aa12.79□□□□□ -0.36
ACTN1-205ENST00000538545 DDOQ99489 341 aa12.79□□□□□ -0.36
ACTN1-205ENST00000538545 TMEM43Q9BTV4 400 aa12.79□□□□□ -0.36
ACTN1-205ENST00000538545 IGHV1-45A0A0A0MS14 117 aa12.78□□□□□ -0.36
ACTN1-205ENST00000538545 RGS5O15539 181 aa12.78□□□□□ -0.36
ACTN1-205ENST00000538545 ARHGEF9O43307 516 aa12.78□□□□□ -0.36
ACTN1-205ENST00000538545 EFNA2O43921 213 aa12.78□□□□□ -0.36
ACTN1-205ENST00000538545 EIF4E2O60573 245 aaKnown RBP12.78□□□□□ -0.36
ACTN1-205ENST00000538545 IFNGP01579 166 aa12.78□□□□□ -0.36
ACTN1-205ENST00000538545 BGLAPP02818 100 aa12.78□□□□□ -0.36
ACTN1-205ENST00000538545 COX6A1P12074 109 aa12.78□□□□□ -0.36
ACTN1-205ENST00000538545 PSMB10P40306 273 aa12.78□□□□□ -0.36
ACTN1-205ENST00000538545 PTGDSP41222 190 aa12.78□□□□□ -0.36
ACTN1-205ENST00000538545 INSM1Q01101 510 aaPredicted RBP12.78□□□□□ -0.36
ACTN1-205ENST00000538545 SNTA1Q13424 505 aa12.78□□□□□ -0.36
ACTN1-205ENST00000538545 PLA2G2CQ5R387 149 aa12.78□□□□□ -0.36
ACTN1-205ENST00000538545 DBX2Q6ZNG2 339 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms