RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 GIPRP48546 466 aa9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 CD97P48960 835 aa9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 DIO1P49895 249 aa9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 CTXN1P60606 82 aa9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 MYBPC1Q00872 1141 aa9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 TOP3AQ13472 1001 aaPredicted RBP9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 IL18R1Q13478 541 aa9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 INAQ16352 499 aa9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 HYAL4Q2M3T9 481 aa9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 ALG10Q5BKT4 473 aa9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 TMEM236Q5W0B7 351 aa9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 TMPPEQ6ZT21 453 aa9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 ESPNLQ6ZVH7 1005 aa9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 P4HA3Q7Z4N8 544 aa9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 GPAT4Q86UL3 456 aa9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 JAZF1Q86VZ6 243 aa9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 SLC43A2Q8N370 569 aa9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 RBMXL3Q8N7X1 1067 aaKnown RBP9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 OR6S1Q8NH40 331 aa9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 NEIL3Q8TAT5 605 aa9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 PNPLA2Q96AD5 504 aa9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 SARAFQ96BY9 339 aa9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 ZNF524Q96C55 264 aa9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 ARL5BQ96KC2 179 aa9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 MOGAT1Q96PD6 335 aa9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 ERMAPQ96PL5 475 aaPredicted RBP9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 MBOAT4Q96T53 435 aa9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 NPAS1Q99742 590 aa9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 ZNF426Q9BUY5 554 aa9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 TMUB1Q9BVT8 246 aa9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 GABARAPL3Q9BY60 117 aa9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 POLDIP3Q9BY77 421 aaKnown RBP9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 UBQLN3Q9H347 655 aa9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 ACKR4Q9NPB9 350 aa9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 CHST11Q9NPF2 352 aa9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 INIPQ9NRY2 104 aa9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 CLN6Q9NWW5 311 aa9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 GRHPRQ9UBQ7 328 aa9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 TUBD1Q9UJT1 453 aa9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 TRAPPC4Q9Y296 219 aa9.6□□□□□ -0.87
TNFRSF1A-211ENST00000538363 LIPT2A6NK58 231 aa9.59□□□□□ -0.87
TNFRSF1A-211ENST00000538363 SNTNA6NMZ2 147 aa9.59□□□□□ -0.87
TNFRSF1A-211ENST00000538363 K7EM74 188 aa9.59□□□□□ -0.87
TNFRSF1A-211ENST00000538363 M0R082 166 aa9.59□□□□□ -0.87
TNFRSF1A-211ENST00000538363 M0R3G1 203 aa9.59□□□□□ -0.87
TNFRSF1A-211ENST00000538363 XKRYO14609 159 aa9.59□□□□□ -0.87
TNFRSF1A-211ENST00000538363 CDC42EP2O14613 210 aa9.59□□□□□ -0.87
TNFRSF1A-211ENST00000538363 EFNA2O43921 213 aa9.59□□□□□ -0.87
TNFRSF1A-211ENST00000538363 MPZL2O60487 215 aa9.59□□□□□ -0.87
TNFRSF1A-211ENST00000538363 PPP1R3DO95685 299 aa9.59□□□□□ -0.87
TNFRSF1A-211ENST00000538363 PMS2P2O95744 297 aa9.59□□□□□ -0.87
TNFRSF1A-211ENST00000538363 PDGFAP04085 211 aa9.59□□□□□ -0.87
TNFRSF1A-211ENST00000538363 F13BP05160 661 aa9.59□□□□□ -0.87
TNFRSF1A-211ENST00000538363 IGFBP1P08833 259 aaPredicted RBP9.59□□□□□ -0.87
TNFRSF1A-211ENST00000538363 PAICSP22234 425 aaKnown RBP9.59□□□□□ -0.87
TNFRSF1A-211ENST00000538363 ENPP1P22413 925 aa9.59□□□□□ -0.87
TNFRSF1A-211ENST00000538363 GGT2P36268 569 aa9.59□□□□□ -0.87
TNFRSF1A-211ENST00000538363 DLX5P56178 289 aa9.59□□□□□ -0.87
TNFRSF1A-211ENST00000538363 CLDN15P56746 228 aa9.59□□□□□ -0.87
TNFRSF1A-211ENST00000538363 EGR4Q05215 589 aa9.59□□□□□ -0.87
TNFRSF1A-211ENST00000538363 SF3B4Q15427 424 aaKnown RBP eCLIP9.59□□□□□ -0.87
TNFRSF1A-211ENST00000538363 NADK2Q4G0N4 442 aa9.59□□□□□ -0.87
TNFRSF1A-211ENST00000538363 GXYLT1Q4G148 440 aa9.59□□□□□ -0.87
TNFRSF1A-211ENST00000538363 NHSL2Q5HYW2 709 aa9.59□□□□□ -0.87
TNFRSF1A-211ENST00000538363 SLC35F1Q5T1Q4 408 aa9.59□□□□□ -0.87
TNFRSF1A-211ENST00000538363 RPUSD3Q6P087 351 aaKnown RBP9.59□□□□□ -0.87
TNFRSF1A-211ENST00000538363 ZNF620Q6ZNG0 422 aa9.59□□□□□ -0.87
TNFRSF1A-211ENST00000538363 Q6ZPB1 254 aaPredicted RBP9.59□□□□□ -0.87
TNFRSF1A-211ENST00000538363 IGFN1Q86VF2 1251 aa9.59□□□□□ -0.87
TNFRSF1A-211ENST00000538363 UEVLDQ8IX04 471 aa9.59□□□□□ -0.87
TNFRSF1A-211ENST00000538363 IQCF1Q8N6M8 205 aa9.59□□□□□ -0.87
TNFRSF1A-211ENST00000538363 CLDN22Q8N7P3 220 aa9.59□□□□□ -0.87
TNFRSF1A-211ENST00000538363 OR2V1Q8NHB1 315 aa9.59□□□□□ -0.87
TNFRSF1A-211ENST00000538363 ZNF417Q8TAU3 575 aa9.59□□□□□ -0.87
TNFRSF1A-211ENST00000538363 SNRNP27Q8WVK2 155 aaKnown RBP9.59□□□□□ -0.87
TNFRSF1A-211ENST00000538363 TFAP2CQ92754 450 aa9.59□□□□□ -0.87
TNFRSF1A-211ENST00000538363 Q96MT0 163 aa9.59□□□□□ -0.87
TNFRSF1A-211ENST00000538363 MUS81Q96NY9 551 aa9.59□□□□□ -0.87
TNFRSF1A-211ENST00000538363 ZNF587Q96SQ5 575 aaPredicted RBP9.59□□□□□ -0.87
TNFRSF1A-211ENST00000538363 GPA33Q99795 319 aa9.59□□□□□ -0.87
TNFRSF1A-211ENST00000538363 GRIP2Q9C0E4 1043 aa9.59□□□□□ -0.87
TNFRSF1A-211ENST00000538363 PAQR5Q9NXK6 330 aaPredicted RBP9.59□□□□□ -0.87
TNFRSF1A-211ENST00000538363 MRPL39Q9NYK5 338 aaKnown RBP9.59□□□□□ -0.87
TNFRSF1A-211ENST00000538363 REV1Q9UBZ9 1251 aa9.59□□□□□ -0.87
TNFRSF1A-211ENST00000538363 MCTS1Q9ULC4 181 aaKnown RBP9.59□□□□□ -0.87
TNFRSF1A-211ENST00000538363 LRRC42Q9Y546 428 aa9.59□□□□□ -0.87
TNFRSF1A-211ENST00000538363 IER3IP1Q9Y5U9 82 aa9.59□□□□□ -0.87
TNFRSF1A-211ENST00000538363 ASPMQ8IZT6 3477 aa9.59□□□□□ -0.87
TNFRSF1A-211ENST00000538363 A0A0J9YW62 118 aa9.58□□□□□ -0.88
TNFRSF1A-211ENST00000538363 ZNF726A6NNF4 738 aa9.58□□□□□ -0.88
TNFRSF1A-211ENST00000538363 B4DXG7 233 aa9.58□□□□□ -0.88
TNFRSF1A-211ENST00000538363 NPIPA2E9PIF3 369 aa9.58□□□□□ -0.88
TNFRSF1A-211ENST00000538363 NPIPA3F8WFD2 350 aa9.58□□□□□ -0.88
TNFRSF1A-211ENST00000538363 ETV2O00321 342 aaPredicted RBP9.58□□□□□ -0.88
TNFRSF1A-211ENST00000538363 SLC16A6O15403 523 aa9.58□□□□□ -0.88
TNFRSF1A-211ENST00000538363 CXCL13O43927 109 aa9.58□□□□□ -0.88
TNFRSF1A-211ENST00000538363 CLIC3O95833 236 aa9.58□□□□□ -0.88
TNFRSF1A-211ENST00000538363 BCL10O95999 233 aa9.58□□□□□ -0.88
TNFRSF1A-211ENST00000538363 PLGP00747 810 aaPredicted RBP9.58□□□□□ -0.88
TNFRSF1A-211ENST00000538363 RENP00797 406 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms