RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 ZNF583Q96ND8 569 aa12.56□□□□□ -0.4
UBE3B-206ENST00000536398 MCHR1Q99705 422 aa12.56□□□□□ -0.4
UBE3B-206ENST00000536398 C12orf10Q9HB07 376 aa12.56□□□□□ -0.4
UBE3B-206ENST00000536398 TMEM27Q9HBJ8 222 aa12.56□□□□□ -0.4
UBE3B-206ENST00000536398 ASB6Q9NWX5 421 aa12.56□□□□□ -0.4
UBE3B-206ENST00000536398 NPAP1Q9NZP6 1156 aa12.56□□□□□ -0.4
UBE3B-206ENST00000536398 MALT1Q9UDY8 824 aa12.56□□□□□ -0.4
UBE3B-206ENST00000536398 CAPN7Q9Y6W3 813 aa12.56□□□□□ -0.4
UBE3B-206ENST00000536398 MAP1AP78559 2803 aaPredicted RBP12.55□□□□□ -0.4
UBE3B-206ENST00000536398 A0A087WUJ7 227 aa12.55□□□□□ -0.4
UBE3B-206ENST00000536398 OR5H1A6NKK0 313 aa12.55□□□□□ -0.4
UBE3B-206ENST00000536398 CPSF4LA6NMK7 179 aaKnown RBP12.55□□□□□ -0.4
UBE3B-206ENST00000536398 BBIP1A8MTZ0 92 aa12.55□□□□□ -0.4
UBE3B-206ENST00000536398 LYPD3O95274 346 aa12.55□□□□□ -0.4
UBE3B-206ENST00000536398 THY1P04216 161 aa12.55□□□□□ -0.4
UBE3B-206ENST00000536398 TNFRSF1BP20333 461 aa12.55□□□□□ -0.4
UBE3B-206ENST00000536398 SELENOPP49908 381 aa12.55□□□□□ -0.4
UBE3B-206ENST00000536398 SEC24CP53992 1094 aa12.55□□□□□ -0.4
UBE3B-206ENST00000536398 NR1H2P55055 460 aa12.55□□□□□ -0.4
UBE3B-206ENST00000536398 NCALDP61601 193 aa12.55□□□□□ -0.4
UBE3B-206ENST00000536398 BSPH1Q075Z2 132 aa12.55□□□□□ -0.4
UBE3B-206ENST00000536398 MAPRE2Q15555 327 aa12.55□□□□□ -0.4
UBE3B-206ENST00000536398 GABRA6Q16445 453 aa12.55□□□□□ -0.4
UBE3B-206ENST00000536398 NRF1Q16656 503 aa12.55□□□□□ -0.4
UBE3B-206ENST00000536398 TIMM23BQ5SRD1 257 aa12.55□□□□□ -0.4
UBE3B-206ENST00000536398 FAM91A1Q658Y4 838 aa12.55□□□□□ -0.4
UBE3B-206ENST00000536398 WDR88Q6ZMY6 472 aa12.55□□□□□ -0.4
UBE3B-206ENST00000536398 PATL1Q86TB9 770 aaKnown RBP12.55□□□□□ -0.4
UBE3B-206ENST00000536398 WDR31Q8NA23 367 aa12.55□□□□□ -0.4
UBE3B-206ENST00000536398 WFDC11Q8NEX6 87 aa12.55□□□□□ -0.4
UBE3B-206ENST00000536398 OR8J3Q8NGG0 315 aa12.55□□□□□ -0.4
UBE3B-206ENST00000536398 AKAP1Q92667 903 aaKnown RBP eCLIP12.55□□□□□ -0.4
UBE3B-206ENST00000536398 SLC47A1Q96FL8 570 aa12.55□□□□□ -0.4
UBE3B-206ENST00000536398 CCL19Q99731 98 aa12.55□□□□□ -0.4
UBE3B-206ENST00000536398 ELAC2Q9BQ52 826 aaKnown RBP12.55□□□□□ -0.4
UBE3B-206ENST00000536398 ECSITQ9BQ95 431 aa12.55□□□□□ -0.4
UBE3B-206ENST00000536398 C1QTNF6Q9BXI9 259 aa12.55□□□□□ -0.4
UBE3B-206ENST00000536398 BEX4Q9NWD9 120 aaPredicted RBP12.55□□□□□ -0.4
UBE3B-206ENST00000536398 PARPBPQ9NWS1 579 aa12.55□□□□□ -0.4
UBE3B-206ENST00000536398 B3GAT1Q9P2W7 334 aa12.55□□□□□ -0.4
UBE3B-206ENST00000536398 UPB1Q9UBR1 384 aa12.55□□□□□ -0.4
UBE3B-206ENST00000536398 ITPR3Q14573 2671 aa12.55□□□□□ -0.4
UBE3B-206ENST00000536398 TRAV36DV7A0A075B6V5 113 aa12.54□□□□□ -0.4
UBE3B-206ENST00000536398 LRRN3E7EW58 273 aa12.54□□□□□ -0.4
UBE3B-206ENST00000536398 M0R082 166 aa12.54□□□□□ -0.4
UBE3B-206ENST00000536398 CLOCKO15516 846 aa12.54□□□□□ -0.4
UBE3B-206ENST00000536398 FZD7O75084 574 aa12.54□□□□□ -0.4
UBE3B-206ENST00000536398 UPK3AO75631 287 aa12.54□□□□□ -0.4
UBE3B-206ENST00000536398 BGLAPP02818 100 aa12.54□□□□□ -0.4
UBE3B-206ENST00000536398 C8BP07358 591 aa12.54□□□□□ -0.4
UBE3B-206ENST00000536398 CD3EP07766 207 aa12.54□□□□□ -0.4
UBE3B-206ENST00000536398 GRPRP30550 384 aa12.54□□□□□ -0.4
UBE3B-206ENST00000536398 HOXC12P31275 282 aa12.54□□□□□ -0.4
UBE3B-206ENST00000536398 GYS2P54840 703 aa12.54□□□□□ -0.4
UBE3B-206ENST00000536398 SLC25A3Q00325 362 aa12.54□□□□□ -0.4
UBE3B-206ENST00000536398 FOXD4Q12950 439 aaPredicted RBP12.54□□□□□ -0.4
UBE3B-206ENST00000536398 ENTPD8Q5MY95 495 aa12.54□□□□□ -0.4
UBE3B-206ENST00000536398 NIPAL3Q6P499 406 aa12.54□□□□□ -0.4
UBE3B-206ENST00000536398 C20orf204Q6ZNR8 217 aa12.54□□□□□ -0.4
UBE3B-206ENST00000536398 CCDC80Q76M96 950 aa12.54□□□□□ -0.4
UBE3B-206ENST00000536398 LINGO2Q7L985 606 aa12.54□□□□□ -0.4
UBE3B-206ENST00000536398 RANBP3LQ86VV4 465 aaPredicted RBP12.54□□□□□ -0.4
UBE3B-206ENST00000536398 TREML1Q86YW5 311 aa12.54□□□□□ -0.4
UBE3B-206ENST00000536398 TGIF2LYQ8IUE0 185 aa12.54□□□□□ -0.4
UBE3B-206ENST00000536398 SLC30A8Q8IWU4 369 aa12.54□□□□□ -0.4
UBE3B-206ENST00000536398 KBTBD8Q8NFY9 601 aa12.54□□□□□ -0.4
UBE3B-206ENST00000536398 ZNF417Q8TAU3 575 aa12.54□□□□□ -0.4
UBE3B-206ENST00000536398 MUCL1Q96DR8 90 aa12.54□□□□□ -0.4
UBE3B-206ENST00000536398 MUS81Q96NY9 551 aa12.54□□□□□ -0.4
UBE3B-206ENST00000536398 MOGAT1Q96PD6 335 aa12.54□□□□□ -0.4
UBE3B-206ENST00000536398 ZNF587Q96SQ5 575 aaPredicted RBP12.54□□□□□ -0.4
UBE3B-206ENST00000536398 SH3GL1Q99961 368 aa12.54□□□□□ -0.4
UBE3B-206ENST00000536398 USB1Q9BQ65 265 aaKnown RBP12.54□□□□□ -0.4
UBE3B-206ENST00000536398 TMUB1Q9BVT8 246 aa12.54□□□□□ -0.4
UBE3B-206ENST00000536398 SLCO5A1Q9H2Y9 848 aa12.54□□□□□ -0.4
UBE3B-206ENST00000536398 TAS2R16Q9NYV7 291 aa12.54□□□□□ -0.4
UBE3B-206ENST00000536398 SELENONQ9NZV5 590 aa12.54□□□□□ -0.4
UBE3B-206ENST00000536398 RASD1Q9Y272 281 aa12.54□□□□□ -0.4
UBE3B-206ENST00000536398 SLC25A15Q9Y619 301 aa12.54□□□□□ -0.4
UBE3B-206ENST00000536398 MED13LQ71F56 2210 aa12.54□□□□□ -0.4
UBE3B-206ENST00000536398 RAI1Q7Z5J4 1906 aaPredicted RBP12.53□□□□□ -0.4
UBE3B-206ENST00000536398 MS4A18H0YCH9 400 aa12.53□□□□□ -0.4
UBE3B-206ENST00000536398 HS3ST1O14792 307 aa12.53□□□□□ -0.4
UBE3B-206ENST00000536398 VAMP5O95183 116 aa12.53□□□□□ -0.4
UBE3B-206ENST00000536398 HPRP00739 348 aa12.53□□□□□ -0.4
UBE3B-206ENST00000536398 NPPAP01160 153 aa12.53□□□□□ -0.4
UBE3B-206ENST00000536398 COX4I1P13073 169 aa12.53□□□□□ -0.4
UBE3B-206ENST00000536398 CDH2P19022 906 aaPredicted RBP12.53□□□□□ -0.4
UBE3B-206ENST00000536398 ZNF83P51522 516 aa12.53□□□□□ -0.4
UBE3B-206ENST00000536398 CLDN17P56750 224 aa12.53□□□□□ -0.4
UBE3B-206ENST00000536398 NKX6-1P78426 367 aaPredicted RBP12.53□□□□□ -0.4
UBE3B-206ENST00000536398 MS4A18Q3C1V0 323 aa12.53□□□□□ -0.4
UBE3B-206ENST00000536398 FAM69AQ5T7M9 428 aa12.53□□□□□ -0.4
UBE3B-206ENST00000536398 INTS11Q5TA45 600 aaKnown RBP12.53□□□□□ -0.4
UBE3B-206ENST00000536398 ADAM5Q6NVV9 412 aa12.53□□□□□ -0.4
UBE3B-206ENST00000536398 LINC00114Q6XXX2 140 aa12.53□□□□□ -0.4
UBE3B-206ENST00000536398 WDFY1Q8IWB7 410 aa12.53□□□□□ -0.4
UBE3B-206ENST00000536398 PCYOX1LQ8NBM8 494 aa12.53□□□□□ -0.4
UBE3B-206ENST00000536398 SLC26A7Q8TE54 656 aa12.53□□□□□ -0.4
UBE3B-206ENST00000536398 IGFBPL1Q8WX77 278 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms