RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 KLHL21Q9UJP4 597 aa12.2□□□□□ -0.46
VPS33B-202ENST00000535906 WDR87Q6ZQQ6 2873 aa12.2□□□□□ -0.46
VPS33B-202ENST00000535906 OR6C68A6NDL8 312 aa12.2□□□□□ -0.46
VPS33B-202ENST00000535906 C4orf47A7E2U8 309 aa12.2□□□□□ -0.46
VPS33B-202ENST00000535906 BLOC1S5-TXNDC5H3BN57 136 aa12.2□□□□□ -0.46
VPS33B-202ENST00000535906 GMFGO60234 142 aa12.2□□□□□ -0.46
VPS33B-202ENST00000535906 SHC1P29353 583 aa12.2□□□□□ -0.46
VPS33B-202ENST00000535906 PYCR1P32322 319 aa12.2□□□□□ -0.46
VPS33B-202ENST00000535906 ACVR1BP36896 505 aa12.2□□□□□ -0.46
VPS33B-202ENST00000535906 NAA10P41227 235 aaPredicted RBP12.2□□□□□ -0.46
VPS33B-202ENST00000535906 CAPZA2P47755 286 aa12.2□□□□□ -0.46
VPS33B-202ENST00000535906 TATDN3Q17R31 274 aa12.2□□□□□ -0.46
VPS33B-202ENST00000535906 WDR45BQ5MNZ6 344 aa12.2□□□□□ -0.46
VPS33B-202ENST00000535906 ARHGAP40Q5TG30 622 aa12.2□□□□□ -0.46
VPS33B-202ENST00000535906 LRRC28Q86X40 367 aaPredicted RBP12.2□□□□□ -0.46
VPS33B-202ENST00000535906 RNF170Q96K19 258 aa12.2□□□□□ -0.46
VPS33B-202ENST00000535906 PGLYRP3Q96LB9 341 aa12.2□□□□□ -0.46
VPS33B-202ENST00000535906 LRFN5Q96NI6 719 aa12.2□□□□□ -0.46
VPS33B-202ENST00000535906 VN1R1Q9GZP7 353 aa12.2□□□□□ -0.46
VPS33B-202ENST00000535906 CCDC86Q9H6F5 360 aaKnown RBP12.2□□□□□ -0.46
VPS33B-202ENST00000535906 EXOSC3Q9NQT5 275 aaKnown RBP12.2□□□□□ -0.46
VPS33B-202ENST00000535906 EXTL2Q9UBQ6 330 aa12.2□□□□□ -0.46
VPS33B-202ENST00000535906 MKL2Q9ULH7 1088 aa12.2□□□□□ -0.46
VPS33B-202ENST00000535906 CACNA1EQ15878 2313 aa12.2□□□□□ -0.46
VPS33B-202ENST00000535906 NUP210LQ5VU65 1888 aa12.2□□□□□ -0.46
VPS33B-202ENST00000535906 FAM240BA0A1B0GVZ2 78 aa12.19□□□□□ -0.46
VPS33B-202ENST00000535906 A0A1B0GX78 115 aa12.19□□□□□ -0.46
VPS33B-202ENST00000535906 ARPC3O15145 178 aa12.19□□□□□ -0.46
VPS33B-202ENST00000535906 PNMTP11086 282 aa12.19□□□□□ -0.46
VPS33B-202ENST00000535906 AQP2P41181 271 aa12.19□□□□□ -0.46
VPS33B-202ENST00000535906 INPP1P49441 399 aa12.19□□□□□ -0.46
VPS33B-202ENST00000535906 NR0B1P51843 470 aaKnown RBP12.19□□□□□ -0.46
VPS33B-202ENST00000535906 ACTC1P68032 377 aa12.19□□□□□ -0.46
VPS33B-202ENST00000535906 ACTA1P68133 377 aa12.19□□□□□ -0.46
VPS33B-202ENST00000535906 ZNF74Q16587 644 aa12.19□□□□□ -0.46
VPS33B-202ENST00000535906 WDR74Q6RFH5 385 aaPredicted RBP12.19□□□□□ -0.46
VPS33B-202ENST00000535906 TMPRSS9Q7Z410 1059 aa12.19□□□□□ -0.46
VPS33B-202ENST00000535906 FYTTD1Q96QD9 318 aaKnown RBP12.19□□□□□ -0.46
VPS33B-202ENST00000535906 TTYH2Q9BSA4 534 aa12.19□□□□□ -0.46
VPS33B-202ENST00000535906 CYSLTR2Q9NS75 346 aa12.19□□□□□ -0.46
VPS33B-202ENST00000535906 AGRPO00253 132 aa12.19□□□□□ -0.46
VPS33B-202ENST00000535906 TRIM3O75382 744 aaPredicted RBP12.19□□□□□ -0.46
VPS33B-202ENST00000535906 YES1P07947 543 aa12.19□□□□□ -0.46
VPS33B-202ENST00000535906 THBS2P35442 1172 aa12.19□□□□□ -0.46
VPS33B-202ENST00000535906 GRK6P43250 576 aa12.19□□□□□ -0.46
VPS33B-202ENST00000535906 CLDN20P56880 219 aa12.19□□□□□ -0.46
VPS33B-202ENST00000535906 PRPS1P60891 318 aa12.19□□□□□ -0.46
VPS33B-202ENST00000535906 LTBQ06643 244 aa12.19□□□□□ -0.46
VPS33B-202ENST00000535906 GGTLC2Q14390 218 aa12.19□□□□□ -0.46
VPS33B-202ENST00000535906 TP53I3Q53FA7 332 aa12.19□□□□□ -0.46
VPS33B-202ENST00000535906 DMKNQ6E0U4 476 aaPredicted RBP12.19□□□□□ -0.46
VPS33B-202ENST00000535906 TSSK4Q6SA08 328 aa12.19□□□□□ -0.46
VPS33B-202ENST00000535906 PRSS42Q7Z5A4 293 aa12.19□□□□□ -0.46
VPS33B-202ENST00000535906 NOXA1Q86UR1 476 aa12.19□□□□□ -0.46
VPS33B-202ENST00000535906 GLCCI1Q86VQ1 547 aa12.19□□□□□ -0.46
VPS33B-202ENST00000535906 TPRA1Q86W33 373 aa12.19□□□□□ -0.46
VPS33B-202ENST00000535906 C10orf53Q8N6V4 93 aa12.19□□□□□ -0.46
VPS33B-202ENST00000535906 ABHD4Q8TB40 342 aa12.19□□□□□ -0.46
VPS33B-202ENST00000535906 OIT3Q8WWZ8 545 aa12.19□□□□□ -0.46
VPS33B-202ENST00000535906 ELF4Q99607 663 aaPredicted RBP12.19□□□□□ -0.46
VPS33B-202ENST00000535906 NLKQ9UBE8 527 aa12.19□□□□□ -0.46
VPS33B-202ENST00000535906 CTSFQ9UBX1 484 aa12.19□□□□□ -0.46
VPS33B-202ENST00000535906 MRTO4Q9UKD2 239 aaKnown RBP12.19□□□□□ -0.46
VPS33B-202ENST00000535906 NOX1Q9Y5S8 564 aa12.19□□□□□ -0.46
VPS33B-202ENST00000535906 CFAP54Q96N23 3096 aa12.18□□□□□ -0.46
VPS33B-202ENST00000535906 FRYLO94915 3013 aa12.18□□□□□ -0.46
VPS33B-202ENST00000535906 SERPINI2O75830 405 aa12.18□□□□□ -0.46
VPS33B-202ENST00000535906 SC5DO75845 299 aa12.18□□□□□ -0.46
VPS33B-202ENST00000535906 SPI1P17947 270 aa12.18□□□□□ -0.46
VPS33B-202ENST00000535906 ZNF117Q03924 483 aa12.18□□□□□ -0.46
VPS33B-202ENST00000535906 PON3Q15166 354 aa12.18□□□□□ -0.46
VPS33B-202ENST00000535906 LYPD4Q6UWN0 246 aa12.18□□□□□ -0.46
VPS33B-202ENST00000535906 SHISA6Q6ZSJ9 500 aa12.18□□□□□ -0.46
VPS33B-202ENST00000535906 LANCL3Q6ZV70 420 aa12.18□□□□□ -0.46
VPS33B-202ENST00000535906 PXKQ7Z7A4 578 aa12.18□□□□□ -0.46
VPS33B-202ENST00000535906 ASCC1Q8N9N2 400 aaKnown RBP12.18□□□□□ -0.46
VPS33B-202ENST00000535906 ZNF563Q8TA94 476 aa12.18□□□□□ -0.46
VPS33B-202ENST00000535906 DAZLQ92904 295 aaKnown RBP12.18□□□□□ -0.46
VPS33B-202ENST00000535906 CCDC74AQ96AQ1 378 aa12.18□□□□□ -0.46
VPS33B-202ENST00000535906 KTI12Q96EK9 354 aaPredicted RBP12.18□□□□□ -0.46
VPS33B-202ENST00000535906 Q96M85 177 aa12.18□□□□□ -0.46
VPS33B-202ENST00000535906 CCNL2Q96S94 520 aaPredicted RBP12.18□□□□□ -0.46
VPS33B-202ENST00000535906 GPX7Q96SL4 187 aaPredicted RBP12.18□□□□□ -0.46
VPS33B-202ENST00000535906 CNN2Q99439 309 aaKnown RBP12.18□□□□□ -0.46
VPS33B-202ENST00000535906 MARVELD1Q9BSK0 173 aa12.18□□□□□ -0.46
VPS33B-202ENST00000535906 NMNAT2Q9BZQ4 307 aa12.18□□□□□ -0.46
VPS33B-202ENST00000535906 MMP25Q9NPA2 562 aa12.18□□□□□ -0.46
VPS33B-202ENST00000535906 NANSQ9NR45 359 aa12.18□□□□□ -0.46
VPS33B-202ENST00000535906 SIT1Q9Y3P8 196 aa12.18□□□□□ -0.46
VPS33B-202ENST00000535906 ALG5Q9Y673 324 aa12.18□□□□□ -0.46
VPS33B-202ENST00000535906 DMDP11532 3685 aa12.18□□□□□ -0.46
VPS33B-202ENST00000535906 ADAMTS20P59510 1910 aa12.18□□□□□ -0.46
VPS33B-202ENST00000535906 COL5A1P20908 1838 aaPredicted RBP12.18□□□□□ -0.46
VPS33B-202ENST00000535906 MUC3AQ02505 3323 aa12.18□□□□□ -0.46
VPS33B-202ENST00000535906 PCNX3Q9H6A9 2034 aa12.18□□□□□ -0.46
VPS33B-202ENST00000535906 A0A0G2JMP0 313 aa12.18□□□□□ -0.46
VPS33B-202ENST00000535906 TEX13CA0A0J9YWL9 993 aa12.18□□□□□ -0.46
VPS33B-202ENST00000535906 A0A0X1KG70 313 aa12.18□□□□□ -0.46
VPS33B-202ENST00000535906 SELENOFO60613 162 aa12.18□□□□□ -0.46
VPS33B-202ENST00000535906 OR2T7P0C7T2 308 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms